The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP012273	Thiolapillus brandeum strain Hiromi 1	3129662	124118	135723	3129662		Escherichia_phage(37.5%)	11	NA	NA
WP_041064287.1|124118_125861_+	carbamoyltransferase	NA	A0A1B1IVF2	uncultured_Mediterranean_phage	29.9	6.7e-50
WP_041064289.1|125857_126922_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	53.6	6.8e-98
WP_041064292.1|126918_127794_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	63.4	1.3e-102
WP_041064295.1|127790_128351_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	50.6	4.4e-48
WP_041064298.1|128347_129250_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	30.4	2.0e-21
WP_144375094.1|129265_130192_+	lysophospholipid acyltransferase family protein	NA	A0A1W6JP29	Morganella_phage	35.3	4.6e-42
WP_052469748.1|130192_131989_+	lipid A export permease/ATP-binding protein MsbA	NA	W8CYL7	Bacillus_phage	31.9	8.6e-61
WP_041069882.1|131993_132704_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_052469749.1|132709_133402_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144375096.1|133424_134276_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052469750.1|134292_135723_+	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	NA	E3SJ88	Synechococcus_phage	42.7	4.5e-20
>prophage 2
NZ_AP012273	Thiolapillus brandeum strain Hiromi 1	3129662	631563	639366	3129662	transposase	Wolbachia_phage(100.0%)	9	NA	NA
WP_041065347.1|631563_632070_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_052469829.1|632080_632818_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_052469830.1|633153_633726_+|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	33.0	4.3e-14
WP_144375164.1|634470_636156_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041065353.1|636180_636510_-|transposase	transposase	transposase	Q75QL1	Wolbachia_phage	51.1	5.3e-17
WP_172649451.1|638197_638299_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_041065362.1|638358_638598_+	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA	NA
WP_041065365.1|638597_638900_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_144375167.1|639213_639366_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_AP012273	Thiolapillus brandeum strain Hiromi 1	3129662	812267	888427	3129662	transposase	Bacillus_virus(22.22%)	60	NA	NA
WP_041065643.1|812267_813824_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	29.2	8.0e-47
WP_041065645.1|813813_814137_+	hypothetical protein	NA	NA	NA	NA	NA
WP_172649455.1|814172_814478_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_041065651.1|814985_816113_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_041065654.1|816109_817246_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_041065657.1|817260_818010_+	YdcF family protein	NA	NA	NA	NA	NA
WP_052469859.1|818308_822391_+	DUF11 domain-containing protein	NA	NA	NA	NA	NA
WP_082030565.1|822387_824733_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041065672.1|824796_825702_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041065673.1|825876_830664_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154662385.1|830677_830851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041065675.1|830872_831787_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041065677.1|831779_832046_+	PqqD family protein	NA	NA	NA	NA	NA
WP_041065680.1|832045_833047_+	radical SAM protein	NA	NA	NA	NA	NA
WP_082030566.1|833050_833455_-	S24/S26 family peptidase	NA	NA	NA	NA	NA
WP_041065686.1|833461_834445_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	29.7	1.3e-15
WP_041065688.1|834469_835435_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	33.8	7.2e-22
WP_041065691.1|835436_836318_-	oligopeptide ABC transporter permease OppC	NA	NA	NA	NA	NA
WP_041065694.1|836314_837238_-	oligopeptide ABC transporter permease OppB	NA	NA	NA	NA	NA
WP_041065697.1|837238_839356_-	Zn-dependent oligopeptidase	NA	NA	NA	NA	NA
WP_041065700.1|839366_840968_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_082030568.1|841069_842419_-	LysM peptidoglycan-binding domain-containing protein	NA	I1VXB7	Halocynthia_phage	41.7	9.5e-12
WP_041065703.1|842511_843273_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_041065705.1|843269_843710_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	54.5	4.3e-38
WP_041065708.1|843706_844414_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	39.9	7.1e-43
WP_052469861.1|844429_847930_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041070264.1|848219_849077_+	DMT family transporter	NA	NA	NA	NA	NA
WP_082030569.1|849234_850209_+	cytochrome-c peroxidase	NA	NA	NA	NA	NA
WP_052469863.1|850205_853109_+	bifunctional diguanylate cyclase/phosphodiesterase	NA	G3MA91	Bacillus_virus	35.2	4.7e-24
WP_082030570.1|853103_854909_-	chloride channel protein	NA	NA	NA	NA	NA
WP_041065711.1|854950_855799_+	ATPase	NA	NA	NA	NA	NA
WP_041065714.1|855798_856878_+	homoserine O-succinyltransferase	NA	NA	NA	NA	NA
WP_041065717.1|856928_857663_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041065720.1|857928_858573_-	adenylate kinase	NA	NA	NA	NA	NA
WP_041065724.1|858786_860112_+	chloride channel protein	NA	NA	NA	NA	NA
WP_041065727.1|860108_861032_+	AEC family transporter	NA	NA	NA	NA	NA
WP_052469864.1|861152_861764_+	translesion DNA synthesis-associated protein ImuA	NA	NA	NA	NA	NA
WP_041065729.1|861763_863197_+	DNA polymerase Y family protein	NA	NA	NA	NA	NA
WP_041065731.1|863193_866238_+	error-prone DNA polymerase	NA	L7TNG6	Rhizobium_phage	30.6	1.0e-66
WP_052469865.1|866274_866751_-	DsrE family protein	NA	NA	NA	NA	NA
WP_082030572.1|866844_867174_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041065735.1|867603_868020_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041065737.1|868060_868987_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041065739.1|869007_869781_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.4	1.7e-13
WP_041065742.1|869777_870770_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_041065745.1|870747_871422_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_041065748.1|871663_872053_+	VOC family protein	NA	NA	NA	NA	NA
WP_041070281.1|872531_873689_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_041065752.1|873912_874440_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_041065755.1|874566_876057_-	FMN-binding glutamate synthase family protein	NA	NA	NA	NA	NA
WP_041065758.1|876196_879781_+	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA	NA
WP_144375191.1|879774_880758_+	dihydroorotate dehydrogenase-like protein	NA	NA	NA	NA	NA
WP_041070283.1|880856_882647_+	NERD domain-containing protein	NA	NA	NA	NA	NA
WP_041065764.1|882693_882930_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041065767.1|883290_884976_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_041065770.1|885146_885440_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_041065773.1|885433_885613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041065777.1|885918_887139_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_041065781.1|887149_887656_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_082030575.1|887695_888427_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_AP012273	Thiolapillus brandeum strain Hiromi 1	3129662	917564	928694	3129662	protease	Staphylococcus_phage(50.0%)	12	NA	NA
WP_041065828.1|917564_918821_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	51.6	4.9e-95
WP_041065831.1|918820_919321_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_082030802.1|919377_920466_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	34.4	1.3e-43
WP_041065837.1|920468_921131_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	37.9	1.7e-30
WP_041065840.1|921097_921736_-	class II aldolase/adducin family protein	NA	NA	NA	NA	NA
WP_041065843.1|921779_922922_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	35.7	5.1e-59
WP_041065846.1|922926_923394_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	55.7	1.8e-31
WP_041065849.1|923390_923825_+	transcription antitermination factor NusB	NA	NA	NA	NA	NA
WP_041065852.1|923817_924750_+	thiamine-phosphate kinase	NA	NA	NA	NA	NA
WP_041065854.1|924746_925226_+	phosphatidylglycerophosphatase A	NA	NA	NA	NA	NA
WP_041065858.1|925219_925858_+|protease	TIGR02281 family clan AA aspartic protease	protease	NA	NA	NA	NA
WP_052469869.1|925889_928694_+	insulinase family protein	NA	A0A1V0SJA4	Klosneuvirus	26.4	3.3e-91
>prophage 5
NZ_AP012273	Thiolapillus brandeum strain Hiromi 1	3129662	2952683	2971667	3129662	transposase,integrase	Mycobacterium_phage(25.0%)	18	2945758:2945774	2974442:2974458
2945758:2945774	attL	CCACCCTGGTGGCCATC	NA	NA	NA	NA
WP_041069478.1|2952683_2953067_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_041069487.1|2955078_2955444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041069490.1|2955550_2955781_-	DUF2007 domain-containing protein	NA	NA	NA	NA	NA
WP_052470212.1|2955855_2956395_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041064084.1|2956511_2957777_+|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	46.9	7.9e-93
WP_172649527.1|2957814_2958648_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_041069493.1|2958644_2959826_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041069496.1|2959927_2960590_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041069499.1|2960692_2961532_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_041069501.1|2961538_2963032_-	AAA family ATPase	NA	K7PHD1	Enterobacteria_phage	42.7	2.3e-99
WP_082030829.1|2963922_2964135_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144375396.1|2964603_2965857_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_082030771.1|2965906_2966608_-	DUF4145 domain-containing protein	NA	A0A1S5S8Y9	Streptococcus_phage	47.8	8.6e-41
WP_041069509.1|2966709_2967261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144375398.1|2967389_2967854_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041069513.1|2968227_2969217_+|integrase	integron integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	42.4	2.0e-59
WP_041069515.1|2969328_2970495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041069518.1|2970581_2971667_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
2974442:2974458	attR	GATGGCCACCAGGGTGG	NA	NA	NA	NA
