assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000828875.1_ASM82887v1	NZ_AP014576	Burkholderia sp. RPE67 chromosome 1	1	504408-505284	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	GTTTCCTCCGCGTGCGCGGAGAT	23	0	0	NA	NA	NA	14	14	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|307aa|up_9|NZ_AP014576.1_493487_494408_-	PRK06606, PRK06606, branched-chain amino acid transaminase	NA|249aa|up_8|NZ_AP014576.1_494801_495548_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|108aa|up_7|NZ_AP014576.1_495544_495868_+	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)	NA|399aa|up_6|NZ_AP014576.1_496228_497425_+	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|479aa|up_5|NZ_AP014576.1_497771_499208_+	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|355aa|up_4|NZ_AP014576.1_499386_500451_+	PRK09196, PRK09196, fructose-bisphosphate aldolase class II	NA|297aa|up_3|NZ_AP014576.1_500607_501498_+	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional	NA|171aa|up_2|NZ_AP014576.1_501509_502022_+	pfam00731, AIRC, AIR carboxylase	NA|396aa|up_1|NZ_AP014576.1_502092_503280_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|341aa|up_0|NZ_AP014576.1_503304_504327_+	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|369aa|down_0|NZ_AP014576.1_505415_506522_-	cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases	NA|532aa|down_1|NZ_AP014576.1_506754_508350_-	COG2027, DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) [Cell envelope biogenesis, outer membrane]	NA|221aa|down_2|NZ_AP014576.1_508609_509272_+	PRK10643, PRK10643, two-component system response regulator PmrA	NA|434aa|down_3|NZ_AP014576.1_509271_510573_+	PRK10337, PRK10337, sensor protein QseC; Provisional	NA|506aa|down_4|NZ_AP014576.1_510918_512436_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|164aa|down_5|NZ_AP014576.1_512576_513068_+	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain	NA|126aa|down_6|NZ_AP014576.1_513212_513590_+	pfam04248, NTP_transf_9, Domain of unknown function (DUF427)	NA|268aa|down_7|NZ_AP014576.1_513664_514468_+	cd05018, CoxG, Carbon monoxide dehydrogenase subunit G (CoxG)	NA|319aa|down_8|NZ_AP014576.1_514464_515421_-	PRK09393, ftrA, transcriptional activator FtrA; Provisional	NA|210aa|down_9|NZ_AP014576.1_515549_516179_+	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases
GCF_000828875.1_ASM82887v1	NZ_AP014576	Burkholderia sp. RPE67 chromosome 1	2	702606-703732	2,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no		cas3,DEDDh,DinG,csa3,RT,WYL	Orphan	GGTCTATCTCCGCGCACGCGGAGGAATC,GGNCTATCTCCGCGCACGCGGAGGAA,GGCCTATCTCCGCGCACGCGGAGGAAAC,GGTCTATCTCCGCGCACGCGGAGGAATC	28,26,28,28	2	2	703611-703643|703672-703704	NZ_AP014576.1_1172428-1172396|NZ_AP014576.1_2279617-2279649	NA:NA:NA:NA	18,18,15,15	18	Orphan	cas3,DEDDh,DinG,csa3,RT,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA|136aa|up_5|NZ_AP014576.1_695283_695691_-,NA|117aa|down_0|NZ_AP014576.1_703794_704145_-,NA|102aa|down_6|NZ_AP014576.1_708263_708569_+,NA|60aa|down_7|NZ_AP014576.1_708819_708999_-	NA|277aa|up_9|NZ_AP014576.1_689834_690665_-	NF033154, endonuc_SmrA, DNA endonuclease SmrA	NA|332aa|up_8|NZ_AP014576.1_690839_691835_-	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|772aa|up_7|NZ_AP014576.1_692199_694515_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|227aa|up_6|NZ_AP014576.1_694565_695246_+	PRK00031, lolA, outer membrane lipoprotein chaperone LolA	NA|136aa|up_5|NZ_AP014576.1_695283_695691_-	NA	NA|304aa|up_4|NZ_AP014576.1_695930_696842_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|312aa|up_3|NZ_AP014576.1_697046_697982_+	cd11592, Agmatinase_PAH, Agmatinase-like family includes proclavaminic acid amidinohydrolase	NA|440aa|up_2|NZ_AP014576.1_697985_699305_-	TIGR02358, purine-cytosine_transport_protein, putative hydroxymethylpyrimidine transporter CytX	NA|439aa|up_1|NZ_AP014576.1_699531_700848_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|433aa|up_0|NZ_AP014576.1_700989_702288_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|117aa|down_0|NZ_AP014576.1_703794_704145_-	NA	NA|261aa|down_1|NZ_AP014576.1_704381_705164_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|175aa|down_2|NZ_AP014576.1_705338_705863_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|256aa|down_3|NZ_AP014576.1_706017_706785_+	PRK01973, PRK01973, septum site-determining protein MinC	NA|272aa|down_4|NZ_AP014576.1_706874_707690_+	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]	NA|85aa|down_5|NZ_AP014576.1_707699_707954_+	PRK13989, PRK13989, cell division topological specificity factor MinE; Provisional	NA|102aa|down_6|NZ_AP014576.1_708263_708569_+	NA	NA|60aa|down_7|NZ_AP014576.1_708819_708999_-	NA	NA|393aa|down_8|NZ_AP014576.1_709248_710427_+	pfam10129, OpgC_C, OpgC protein	NA|435aa|down_9|NZ_AP014576.1_710448_711753_-	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily
GCF_000828875.1_ASM82887v1	NZ_AP014577	Burkholderia sp. RPE67 chromosome 2	1	1739535-1740295	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,DinG,csa3,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	GGTCTATCTCCGCACACGCGGAGGAACC,GGTCTATCTCCGCNCACGCGGAGGAACC,GGTCTATCTCCGCACACGCGGAGGAACC	28,28,28	0	0	NA	NA	NA:NA:NA	12,12,8	12	TypeI-E	cas3,DEDDh,DinG,csa3,RT,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|639aa|up_9|NZ_AP014577.1_1726092_1728009_-	pfam11982, DUF3483, Domain of unknown function (DUF3483)	NA|688aa|up_8|NZ_AP014577.1_1728023_1730087_-	cd04734, OYE_like_3_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 3	NA|177aa|up_7|NZ_AP014577.1_1730116_1730647_-	smart00989, V4R, The V4R (vinyl 4 reductase) domain is a predicted small molecular binding domain, that may bind to hydrocarbons	NA|324aa|up_6|NZ_AP014577.1_1730683_1731655_-	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|333aa|up_5|NZ_AP014577.1_1732093_1733092_+	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]	NA|177aa|up_4|NZ_AP014577.1_1733736_1734267_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|399aa|up_3|NZ_AP014577.1_1734305_1735502_-	TIGR02819, formaldehyde_dehydrogenase_glutathione-independent, formaldehyde dehydrogenase, glutathione-independent	NA|196aa|up_2|NZ_AP014577.1_1735717_1736305_+	PRK00767, PRK00767, transcriptional regulator BetI; Validated	NA|490aa|up_1|NZ_AP014577.1_1736333_1737803_+	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional	NA|568aa|up_0|NZ_AP014577.1_1737814_1739518_+	PRK02106, PRK02106, choline dehydrogenase; Validated	NA|346aa|down_0|NZ_AP014577.1_1740375_1741413_-	pfam00665, rve, Integrase core domain	cas2|101aa|down_1|NZ_AP014577.1_1741779_1742082_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|296aa|down_2|NZ_AP014577.1_1742053_1742941_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|249aa|down_3|NZ_AP014577.1_1742957_1743704_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|247aa|down_4|NZ_AP014577.1_1743700_1744441_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|394aa|down_5|NZ_AP014577.1_1744442_1745624_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|193aa|down_6|NZ_AP014577.1_1745674_1746253_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|535aa|down_7|NZ_AP014577.1_1746239_1747844_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|870aa|down_8|NZ_AP014577.1_1747840_1750450_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|473aa|down_9|NZ_AP014577.1_1750634_1752053_-	TIGR00895, transport_protein, benzoate transport
GCF_000828875.1_ASM82887v1	NZ_AP014577	Burkholderia sp. RPE67 chromosome 2	2	1741540-1741689	2,2	PILER-CR,CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,DinG,csa3,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGGTCTATCTCCGCACACGCGGAGGAACC,GGTCTATCTCCGCACACGCGGAGGAACC	30,28	0	0	NA	NA	NA:NA	2,2	2	TypeI-E	cas3,DEDDh,DinG,csa3,RT,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA|88aa|down_9|NZ_AP014577.1_1752161_1752425_-	NA|688aa|up_9|NZ_AP014577.1_1728023_1730087_-	cd04734, OYE_like_3_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 3	NA|177aa|up_8|NZ_AP014577.1_1730116_1730647_-	smart00989, V4R, The V4R (vinyl 4 reductase) domain is a predicted small molecular binding domain, that may bind to hydrocarbons	NA|324aa|up_7|NZ_AP014577.1_1730683_1731655_-	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|333aa|up_6|NZ_AP014577.1_1732093_1733092_+	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]	NA|177aa|up_5|NZ_AP014577.1_1733736_1734267_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|399aa|up_4|NZ_AP014577.1_1734305_1735502_-	TIGR02819, formaldehyde_dehydrogenase_glutathione-independent, formaldehyde dehydrogenase, glutathione-independent	NA|196aa|up_3|NZ_AP014577.1_1735717_1736305_+	PRK00767, PRK00767, transcriptional regulator BetI; Validated	NA|490aa|up_2|NZ_AP014577.1_1736333_1737803_+	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional	NA|568aa|up_1|NZ_AP014577.1_1737814_1739518_+	PRK02106, PRK02106, choline dehydrogenase; Validated	NA|346aa|up_0|NZ_AP014577.1_1740375_1741413_-	pfam00665, rve, Integrase core domain	cas2|101aa|down_0|NZ_AP014577.1_1741779_1742082_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|296aa|down_1|NZ_AP014577.1_1742053_1742941_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|249aa|down_2|NZ_AP014577.1_1742957_1743704_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|247aa|down_3|NZ_AP014577.1_1743700_1744441_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|394aa|down_4|NZ_AP014577.1_1744442_1745624_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|193aa|down_5|NZ_AP014577.1_1745674_1746253_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|535aa|down_6|NZ_AP014577.1_1746239_1747844_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|870aa|down_7|NZ_AP014577.1_1747840_1750450_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|473aa|down_8|NZ_AP014577.1_1750634_1752053_-	TIGR00895, transport_protein, benzoate transport	NA|88aa|down_9|NZ_AP014577.1_1752161_1752425_-	NA
