assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000829985.1_ASM82998v1	NZ_CP009166	Escherichia coli 1303 chromosome, complete genome	1	562031-562127	1	CRISPRCasFinder	no		DEDDh,DinG,PrimPol,csa3,cas3,c2c9_V-U4,cas2,PD-DExK,WYL	Orphan	GCTTGACGCGTCTTATCAGGCCTACAA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PrimPol,csa3,cas3,c2c9_V-U4,cas2,PD-DExK,WYL	NA,NA	NA|454aa|up_9|NZ_CP009166.1_549811_551173_+	PRK08044, PRK08044, allantoinase AllB	NA|434aa|up_8|NZ_CP009166.1_551229_552531_+	PRK11412, PRK11412, uracil/xanthine transporter	NA|382aa|up_7|NZ_CP009166.1_552552_553698_+	PRK09932, PRK09932, glycerate 3-kinase	NA|262aa|up_6|NZ_CP009166.1_553925_554711_-	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|412aa|up_5|NZ_CP009166.1_554721_555957_-	TIGR03176, AllC, allantoate amidohydrolase	NA|350aa|up_4|NZ_CP009166.1_555978_557028_-	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|556aa|up_3|NZ_CP009166.1_557344_559012_+	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|420aa|up_2|NZ_CP009166.1_559021_560281_+	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|272aa|up_1|NZ_CP009166.1_560291_561107_+	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|298aa|up_0|NZ_CP009166.1_561103_561997_+	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|356aa|down_0|NZ_CP009166.1_562191_563259_-	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|170aa|down_1|NZ_CP009166.1_563255_563765_-	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|241aa|down_2|NZ_CP009166.1_563882_564605_-	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|165aa|down_3|NZ_CP009166.1_564607_565102_-	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|462aa|down_4|NZ_CP009166.1_565275_566661_+	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|174aa|down_5|NZ_CP009166.1_566696_567218_-	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|71aa|down_6|NZ_CP009166.1_567325_567538_-	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|289aa|down_7|NZ_CP009166.1_567539_568406_-	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|181aa|down_8|NZ_CP009166.1_568876_569419_+	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|231aa|down_9|NZ_CP009166.1_569638_570331_+	PRK15195, PRK15195, molecular chaperone FimC
GCF_000829985.1_ASM82998v1	NZ_CP009166	Escherichia coli 1303 chromosome, complete genome	2	2561437-2561563	2	CRISPRCasFinder	no		DEDDh,DinG,PrimPol,csa3,cas3,c2c9_V-U4,cas2,PD-DExK,WYL	Orphan	TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	39	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PrimPol,csa3,cas3,c2c9_V-U4,cas2,PD-DExK,WYL	NA,NA	NA|395aa|up_9|NZ_CP009166.1_2540344_2541529_+	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|259aa|up_8|NZ_CP009166.1_2541602_2542379_-	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|550aa|up_7|NZ_CP009166.1_2542383_2544033_-	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|1465aa|up_6|NZ_CP009166.1_2544033_2548428_-	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|208aa|up_5|NZ_CP009166.1_2548571_2549195_-	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|563aa|up_4|NZ_CP009166.1_2549191_2550880_-	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|876aa|up_3|NZ_CP009166.1_2551028_2553656_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|241aa|up_2|NZ_CP009166.1_2553802_2554525_+	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|1251aa|up_1|NZ_CP009166.1_2554652_2558405_-	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|762aa|up_0|NZ_CP009166.1_2559100_2561386_+	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|377aa|down_0|NZ_CP009166.1_2561619_2562750_+	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|85aa|down_1|NZ_CP009166.1_2562749_2563004_+	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|217aa|down_2|NZ_CP009166.1_2563057_2563708_-	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|359aa|down_3|NZ_CP009166.1_2564170_2565247_-	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|453aa|down_4|NZ_CP009166.1_2565251_2566610_-	PRK11273, glpT, glycerol-3-phosphate transporter	NA|543aa|down_5|NZ_CP009166.1_2566882_2568511_+	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|420aa|down_6|NZ_CP009166.1_2568500_2569760_+	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|397aa|down_7|NZ_CP009166.1_2569756_2570947_+	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|300aa|down_8|NZ_CP009166.1_2571139_2572039_+	PRK09956, PRK09956, ISNCY family transposase	NA|62aa|down_9|NZ_CP009166.1_2572051_2572237_+	PRK09956, PRK09956, ISNCY family transposase
GCF_000829985.1_ASM82998v1	NZ_CP009166	Escherichia coli 1303 chromosome, complete genome	3	3046655-3048024	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2	DEDDh,DinG,PrimPol,csa3,cas3,c2c9_V-U4,cas2,PD-DExK,WYL	Unclear	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	22,22,22	22	Unclear	DEDDh,DinG,PrimPol,csa3,cas3,c2c9_V-U4,cas2,PD-DExK,WYL	NA,NA	NA|254aa|up_9|NZ_CP009166.1_3038466_3039228_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP009166.1_3039208_3040258_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP009166.1_3040254_3040734_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP009166.1_3040733_3041444_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP009166.1_3041462_3041774_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP009166.1_3041967_3042291_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP009166.1_3042340_3042946_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP009166.1_3042945_3044373_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP009166.1_3044374_3045283_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP009166.1_3045534_3046572_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|78aa|down_0|NZ_CP009166.1_3048120_3048354_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|371aa|down_1|NZ_CP009166.1_3050628_3051741_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|51aa|down_2|NZ_CP009166.1_3051933_3052086_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_3|NZ_CP009166.1_3052350_3053085_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_4|NZ_CP009166.1_3053158_3054871_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|down_5|NZ_CP009166.1_3054870_3056670_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|121aa|down_6|NZ_CP009166.1_3056988_3057351_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|424aa|down_7|NZ_CP009166.1_3057428_3058700_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|down_8|NZ_CP009166.1_3058690_3058951_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|down_9|NZ_CP009166.1_3058967_3059543_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
GCF_000829985.1_ASM82998v1	NZ_CP009166	Escherichia coli 1303 chromosome, complete genome	4	3068785-3069057	4,2,2	CRISPRCasFinder,CRT,PILER-CR	no		DEDDh,DinG,PrimPol,csa3,cas3,c2c9_V-U4,cas2,PD-DExK,WYL	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	4,4,3	4	Orphan	DEDDh,DinG,PrimPol,csa3,cas3,c2c9_V-U4,cas2,PD-DExK,WYL	NA,NA|47aa|down_1|NZ_CP009166.1_3070206_3070347_+	NA|424aa|up_9|NZ_CP009166.1_3057428_3058700_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|NZ_CP009166.1_3058690_3058951_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|NZ_CP009166.1_3058967_3059543_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|NZ_CP009166.1_3059690_3060551_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP009166.1_3060547_3061327_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|470aa|up_4|NZ_CP009166.1_3061304_3062714_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP009166.1_3062735_3064190_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP009166.1_3064259_3065045_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP009166.1_3065363_3066641_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP009166.1_3066667_3068146_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP009166.1_3069396_3070068_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|47aa|down_1|NZ_CP009166.1_3070206_3070347_+	NA	NA|291aa|down_2|NZ_CP009166.1_3070360_3071233_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_3|NZ_CP009166.1_3071292_3072591_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_4|NZ_CP009166.1_3072678_3074316_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_5|NZ_CP009166.1_3074543_3075335_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_6|NZ_CP009166.1_3075405_3075741_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_7|NZ_CP009166.1_3075740_3075989_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_8|NZ_CP009166.1_3076066_3078301_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_9|NZ_CP009166.1_3078348_3079650_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
