The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP009369	Bacillus cereus strain FM1 chromosome, complete genome	5295158	621238	628919	5295158		uncultured_Caudovirales_phage(16.67%)	9	NA	NA
WP_033691318.1|621238_622222_+	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	26.2	2.1e-16
WP_000403735.1|622211_622982_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.1	2.2e-13
WP_033691316.1|623014_623779_+	class B sortase	NA	NA	NA	NA	NA
WP_000587814.1|623844_624168_-	heme oxygenase	NA	NA	NA	NA	NA
WP_001255958.1|624464_625664_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	41.2	6.1e-71
WP_001014310.1|625703_625898_-	YwbE family protein	NA	NA	NA	NA	NA
WP_033691311.1|626240_626933_+	response regulator transcription factor	NA	B5LWA6	Feldmannia_species_virus	28.8	1.4e-06
WP_033691309.1|626934_627870_+	HAMP domain-containing histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	25.9	8.6e-12
WP_042514645.1|627995_628919_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	43.5	6.9e-46
>prophage 2
NZ_CP009369	Bacillus cereus strain FM1 chromosome, complete genome	5295158	2317652	2326832	5295158		Geobacillus_phage(25.0%)	11	NA	NA
WP_000540642.1|2317652_2318459_+	N-acetylmuramoyl-L-alanine amidase	NA	D2XR33	Bacillus_phage	68.9	2.1e-107
WP_001981065.1|2318523_2318736_-	DUF3006 domain-containing protein	NA	Q0H256	Geobacillus_phage	52.9	1.9e-12
WP_042514998.1|2318738_2320124_-	MBL fold metallo-hydrolase	NA	Q0H255	Geobacillus_phage	59.9	6.0e-78
WP_001981059.1|2320553_2320970_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000648514.1|2320972_2321326_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_033691753.1|2321347_2322055_+	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	27.0	6.7e-17
WP_002194813.1|2322120_2322507_+	DUF2809 domain-containing protein	NA	NA	NA	NA	NA
WP_042514999.1|2322528_2323032_+	DNA topology modulation protein	NA	A0A097BYE2	Leuconostoc_phage	45.5	4.3e-42
WP_042515000.1|2323177_2323858_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A075BUR2	Microcystis_phage	38.7	4.6e-31
WP_042515001.1|2323913_2325107_+	glycosyl transferase family 1	NA	Q0IKX4	Leucania_separata_nucleopolyhedrovirus	26.2	3.1e-06
WP_042515002.1|2325464_2326832_+	chitin-binding protein	NA	A0A0K1Y848	Apis_mellifera_filamentous_virus	38.1	4.3e-20
>prophage 3
NZ_CP009369	Bacillus cereus strain FM1 chromosome, complete genome	5295158	2645778	2673688	5295158	terminase,tail,holin,portal	Bacillus_phage(84.21%)	35	NA	NA
WP_042515162.1|2645778_2647242_-	recombinase family protein	NA	A0A288WFZ3	Bacillus_phage	54.8	5.6e-143
WP_042515163.1|2647658_2648315_-	phosphoribulokinase	NA	A0A2L2DM46	Acanthamoeba_polyphaga_mimivirus	25.6	1.1e-05
WP_042515164.1|2648516_2649137_-	phage protein	NA	H0USY2	Bacillus_phage	79.8	2.0e-94
WP_042515165.1|2649078_2650269_-	cell division protein FtsK	NA	A0A288WFS1	Bacillus_phage	64.9	2.0e-146
WP_029438305.1|2650384_2650567_-	hypothetical protein	NA	Q2I8E2	Bacillus_phage	88.3	1.5e-21
WP_042515166.1|2650563_2650866_-	hypothetical protein	NA	A0A288WG38	Bacillus_phage	56.1	4.0e-27
WP_042515167.1|2650865_2651132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042515169.1|2651317_2651518_+	helix-turn-helix transcriptional regulator	NA	Q2I8E4	Bacillus_phage	54.5	1.4e-12
WP_144402511.1|2652160_2652283_-	DUF3961 domain-containing protein	NA	Q3HKZ4	Bacillus_phage	59.5	2.8e-08
WP_033694537.1|2652463_2652703_+	helix-turn-helix transcriptional regulator	NA	A0A288WFZ7	Bacillus_phage	67.1	2.0e-21
WP_042515170.1|2652779_2653106_+	hypothetical protein	NA	A0A0S2GLG3	Bacillus_phage	47.2	9.6e-19
WP_042515171.1|2653164_2653359_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042515173.1|2653355_2654039_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052495882.1|2654093_2654747_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042515174.1|2654916_2655615_-	N-acetylmuramoyl-L-alanine amidase	NA	Q2I8E6	Bacillus_phage	92.7	3.3e-125
WP_042515175.1|2655631_2655862_-|holin	phage holin	holin	A0A0S2MVE8	Bacillus_phage	86.8	3.8e-30
WP_042515177.1|2655876_2656161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042515178.1|2656255_2656531_-	hypothetical protein	NA	A0A1B1P7E8	Bacillus_phage	72.9	1.9e-31
WP_080333990.1|2656551_2658930_-	hypothetical protein	NA	Q2I8E8	Bacillus_phage	36.7	6.3e-184
WP_042515180.1|2658926_2660438_-|tail	phage tail protein	tail	A0A1B1P7W7	Bacillus_phage	58.2	2.5e-162
WP_042515948.1|2660450_2664239_-|tail	phage tail tape measure protein	tail	A6M961	Geobacillus_virus	40.8	2.9e-42
WP_042515181.1|2664275_2664530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042512732.1|2664619_2664997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158319630.1|2665056_2665233_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042515182.1|2665274_2665790_-|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_042515183.1|2665803_2666211_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042515184.1|2666213_2666573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042515185.1|2666572_2666947_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042515186.1|2666950_2667757_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042515187.1|2667761_2668103_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042515188.1|2668132_2668357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042515189.1|2668406_2669531_-	DUF5309 family protein	NA	NA	NA	NA	NA
WP_042515190.1|2669593_2670379_-	scaffolding protein	NA	Q4ZC70	Staphylococcus_virus	38.2	4.1e-07
WP_042515191.1|2670437_2671955_-|portal	phage portal protein	portal	A0A142F1L7	Bacillus_phage	30.4	4.7e-68
WP_042515192.1|2671972_2673688_-|terminase	phage terminase large subunit	terminase	A0A142F1L6	Bacillus_phage	52.7	1.2e-149
>prophage 4
NZ_CP009369	Bacillus cereus strain FM1 chromosome, complete genome	5295158	3090979	3105402	5295158		Bacillus_phage(60.0%)	14	NA	NA
WP_001258498.1|3090979_3091852_-	aminoglycoside 6-adenylyltransferase	NA	A0A1X9I6F2	Streptococcus_phage	42.9	4.0e-64
WP_042515313.1|3091984_3092656_-	O-methyltransferase	NA	W8CYT3	Bacillus_phage	90.5	2.6e-63
WP_000818985.1|3092803_3093523_-	3-ketoacyl-ACP reductase	NA	W8CYX9	Bacillus_phage	100.0	5.9e-61
WP_001979959.1|3094016_3094934_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	44.1	1.4e-43
WP_042515314.1|3094930_3095683_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_001979955.1|3095695_3096427_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_001979953.1|3096449_3096800_+	YxeA family protein	NA	NA	NA	NA	NA
WP_001979951.1|3097150_3097864_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.9	1.2e-37
WP_001979949.1|3097864_3099277_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	26.2	7.1e-10
WP_033691618.1|3099355_3100444_-	HAMP domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	89.8	2.5e-172
WP_139254152.1|3100440_3101145_-	response regulator	NA	W8CYM9	Bacillus_phage	92.7	6.5e-121
WP_042515315.1|3101206_3102967_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	96.9	4.2e-270
WP_001194292.1|3103206_3103971_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000755549.1|3104133_3105402_-	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	32.0	7.6e-11
>prophage 5
NZ_CP009369	Bacillus cereus strain FM1 chromosome, complete genome	5295158	4673390	4681763	5295158		Synechococcus_phage(50.0%)	8	NA	NA
WP_001979846.1|4673390_4673978_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.8	7.7e-27
WP_001262445.1|4673974_4675015_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	45.9	3.2e-68
WP_000879025.1|4675117_4676533_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.4	3.3e-55
WP_000055574.1|4676517_4678737_-	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	41.3	4.4e-163
WP_001979839.1|4678720_4679404_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_000278820.1|4679400_4679655_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_001170542.1|4679647_4680367_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	44.3	5.2e-49
WP_000625683.1|4680455_4681763_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	25.3	6.4e-21
>prophage 6
NZ_CP009369	Bacillus cereus strain FM1 chromosome, complete genome	5295158	4724754	4732703	5295158		Bacillus_phage(33.33%)	6	NA	NA
WP_033692601.1|4724754_4726260_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	31.1	4.1e-32
WP_001975561.1|4726243_4726945_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.9	9.5e-40
WP_000833097.1|4727090_4728416_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	29.4	9.2e-44
WP_144402518.1|4728799_4730338_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	31.2	2.6e-21
WP_001975554.1|4730745_4732380_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	58.0	4.5e-157
WP_000917306.1|4732418_4732703_-	co-chaperone GroES	NA	A0A221S3C8	uncultured_virus	53.8	1.2e-20
>prophage 1
NZ_CP009368	Bacillus cereus strain FM1 plasmid unnamed, complete sequence	402605	242829	314208	402605	transposase	Bacillus_phage(41.67%)	53	NA	NA
WP_042514373.1|242829_243951_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	S6AND0	Bacillus_phage	80.4	3.4e-172
WP_042514374.1|245284_248566_-	VaFE repeat-containing surface-anchored protein	NA	NA	NA	NA	NA
WP_042514375.1|249783_250434_+	YIP1 family protein	NA	NA	NA	NA	NA
WP_042514376.1|250672_251032_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042514377.1|251343_252279_-	DUF3994 domain-containing protein	NA	NA	NA	NA	NA
WP_042514378.1|252450_252936_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514380.1|252969_253359_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514381.1|254154_255408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514382.1|256555_257524_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042514383.1|257739_258828_-	AAA domain-containing protein	NA	A0A2C9CXH0	Yersinia_phage	34.6	3.9e-08
WP_052495856.1|258824_259595_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514384.1|260165_261287_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	S6AND0	Bacillus_phage	76.9	6.4e-163
WP_042514385.1|261528_262887_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_158319626.1|262931_263072_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514386.1|264062_265316_-	MFS transporter	NA	NA	NA	NA	NA
WP_080333927.1|265322_266834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514388.1|266806_269221_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514389.1|269234_270053_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514390.1|273028_274654_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	36.2	2.0e-48
WP_080333929.1|274702_277435_-	restriction endonuclease	NA	NA	NA	NA	NA
WP_042514391.1|277766_277994_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514392.1|278154_278736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514393.1|278960_279506_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000834892.1|279811_280093_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514395.1|281176_281968_-	5-deoxy-glucuronate isomerase	NA	NA	NA	NA	NA
WP_042514396.1|282072_282918_-	class II aldolase	NA	NA	NA	NA	NA
WP_042514397.1|283046_283943_-	myo-inosose-2 dehydratase	NA	NA	NA	NA	NA
WP_042514398.1|284065_286000_-	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)	NA	NA	NA	NA	NA
WP_042514399.1|286154_287618_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_042514400.1|287695_288694_-	5-dehydro-2-deoxygluconokinase	NA	NA	NA	NA	NA
WP_042514401.1|288797_289823_-	inositol 2-dehydrogenase	NA	NA	NA	NA	NA
WP_042514402.1|290316_291597_+	MFS transporter	NA	NA	NA	NA	NA
WP_042514403.1|291684_292686_-	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	28.2	3.4e-22
WP_042514404.1|293606_294326_+	S-layer homology domain-containing protein	NA	NA	NA	NA	NA
WP_000651404.1|295580_296390_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_042514405.1|297156_297558_+|transposase	IS200/IS605 family transposase	transposase	Q332K6	Clostridium_botulinum_C_phage	71.2	1.5e-50
WP_042514406.1|297563_298643_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0A8WI33	Clostridium_phage	33.5	2.9e-19
WP_042514407.1|299110_299308_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_042514408.1|299459_299819_+	helix-turn-helix transcriptional regulator	NA	A0A0A8WFJ2	Clostridium_phage	50.6	3.2e-15
WP_042514409.1|300468_300921_-	DNA repair protein	NA	A0A1B2LRS6	Wolbachia_phage	43.4	1.0e-10
WP_042514410.1|301343_302561_-	ATP-dependent helicase	NA	NA	NA	NA	NA
WP_042514411.1|304067_304295_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514412.1|304661_305243_-	PRK06770 family protein	NA	NA	NA	NA	NA
WP_042514413.1|305493_307476_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514414.1|307465_308113_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514415.1|308117_309587_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514416.1|309868_310084_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042514417.1|310129_310369_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052495857.1|311315_312062_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042514419.1|312167_312353_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144402502.1|313196_313511_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	76.0	1.8e-38
WP_158319627.1|313495_313660_-	hypothetical protein	NA	A0A1B1P773	Bacillus_phage	55.3	3.8e-08
WP_042514420.1|313686_314208_-|transposase	IS3 family transposase	transposase	A0A1B1P776	Bacillus_phage	49.1	5.8e-34
>prophage 2
NZ_CP009368	Bacillus cereus strain FM1 plasmid unnamed, complete sequence	402605	355007	364354	402605		Bacillus_phage(85.71%)	9	NA	NA
WP_042514447.1|355007_356822_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	35.1	1.8e-42
WP_042514507.1|357844_358420_-	hypothetical protein	NA	W8CZ47	Bacillus_phage	75.5	9.7e-83
WP_042514448.1|358442_359609_-	DNA translocase FtsK	NA	W8CYG2	Bacillus_phage	79.4	2.7e-180
WP_042514449.1|359624_359945_-	hypothetical protein	NA	A0A0S2GLK1	Bacillus_phage	62.3	1.2e-29
WP_042514450.1|360234_360456_+	helix-turn-helix transcriptional regulator	NA	A0A0S2GLH4	Bacillus_phage	43.8	3.2e-10
WP_042514451.1|360851_361649_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A141HRV8	Bacillus_phage	39.8	2.0e-30
WP_042514452.1|362065_362731_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_042514453.1|362730_363885_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_042514454.1|364081_364354_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	1.4e-26
