assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000834415.1_ASM83441v1	NZ_CP009759	Yersinia pseudotuberculosis strain EP2/+ chromosome, complete genome	1	427502-428069	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	DEDDh	DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Unclear	TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	9,9,8	9	Orphan	DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA,NA|16aa|down_6|NZ_CP009759.1_436373_436421_+	NA|382aa|up_9|NZ_CP009759.1_412909_414055_-	PRK11197, lldD, L-lactate dehydrogenase; Provisional	NA|426aa|up_8|NZ_CP009759.1_414351_415629_-	cd03324, rTSbeta_L-fuconate_dehydratase, Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA	NA|281aa|up_7|NZ_CP009759.1_415660_416503_-	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|247aa|up_6|NZ_CP009759.1_416550_417291_-	cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs	NA|141aa|up_5|NZ_CP009759.1_417737_418160_+	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|435aa|up_4|NZ_CP009759.1_418168_419473_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|1025aa|up_3|NZ_CP009759.1_420665_423740_+	pfam11924, IAT_beta, Inverse autotransporter, beta-domain	NA|106aa|up_2|NZ_CP009759.1_423883_424201_-	PRK05423, PRK05423, DUF496 family protein	NA|370aa|up_1|NZ_CP009759.1_424634_425744_-	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs	DEDDh|477aa|up_0|NZ_CP009759.1_426036_427467_+	PRK11779, sbcB, exonuclease I; Provisional	NA|464aa|down_0|NZ_CP009759.1_428563_429955_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|364aa|down_1|NZ_CP009759.1_430413_431505_-	PRK10586, PRK10586, putative oxidoreductase; Provisional	NA|514aa|down_2|NZ_CP009759.1_431790_433332_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|332aa|down_3|NZ_CP009759.1_433328_434324_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|97aa|down_4|NZ_CP009759.1_434725_435016_+	pfam16695, Tai4, Type VI secretion system (T6SS), amidase immunity protein	NA|276aa|down_5|NZ_CP009759.1_435170_435998_-	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	NA|16aa|down_6|NZ_CP009759.1_436373_436421_+	NA	NA|300aa|down_7|NZ_CP009759.1_436711_437611_+	PRK00489, hisG, ATP phosphoribosyltransferase; Reviewed	NA|444aa|down_8|NZ_CP009759.1_437614_438946_+	PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed	NA|383aa|down_9|NZ_CP009759.1_438948_440097_+	PRK01688, PRK01688, histidinol-phosphate aminotransferase; Provisional
GCF_000834415.1_ASM83441v1	NZ_CP009759	Yersinia pseudotuberculosis strain EP2/+ chromosome, complete genome	2	555140-555261	2	CRISPRCasFinder	no		DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Orphan	CAATTGATTATATCGATTAATATTGGCATTAAG	33	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA|73aa|up_0|NZ_CP009759.1_554564_554783_-,NA	NA|83aa|up_9|NZ_CP009759.1_547440_547689_-	PRK07117, PRK07117, acyl carrier protein; Validated	NA|147aa|up_8|NZ_CP009759.1_547726_548167_-	pfam13924, Lipocalin_5, Lipocalin-like domain	NA|263aa|up_7|NZ_CP009759.1_548253_549042_-	cd05233, SDR_c, classical (c) SDRs	NA|251aa|up_6|NZ_CP009759.1_549044_549797_-	PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase; Validated	NA|240aa|up_5|NZ_CP009759.1_549798_550518_-	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]	NA|413aa|up_4|NZ_CP009759.1_550510_551749_-	COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]	NA|246aa|up_3|NZ_CP009759.1_551764_552502_-	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs	NA|428aa|up_2|NZ_CP009759.1_552503_553787_-	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II	NA|175aa|up_1|NZ_CP009759.1_553776_554301_-	COG0764, FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]	NA|73aa|up_0|NZ_CP009759.1_554564_554783_-	NA	NA|249aa|down_0|NZ_CP009759.1_555513_556260_+	PRK06172, PRK06172, SDR family oxidoreductase	NA|806aa|down_1|NZ_CP009759.1_556413_558831_+	pfam01565, FAD_binding_4, FAD binding domain	NA|110aa|down_2|NZ_CP009759.1_562491_562821_+	COG2920, DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit [Inorganic ion transport and metabolism]	NA|93aa|down_3|NZ_CP009759.1_562872_563151_-	PRK14426, PRK14426, acylphosphatase; Provisional	NA|397aa|down_4|NZ_CP009759.1_563244_564435_+	PRK15128, PRK15128, 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA|106aa|down_5|NZ_CP009759.1_564495_564813_+	PRK14129, PRK14129, heat shock protein HspQ; Provisional	NA|139aa|down_6|NZ_CP009759.1_564921_565338_-	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|227aa|down_7|NZ_CP009759.1_565653_566334_+	PRK03641, PRK03641, DUF2057 family protein	NA|155aa|down_8|NZ_CP009759.1_566512_566977_+	PRK05234, mgsA, methylglyoxal synthase; Validated	NA|685aa|down_9|NZ_CP009759.1_567037_569092_-	PRK11054, helD, DNA helicase IV; Provisional
GCF_000834415.1_ASM83441v1	NZ_CP009759	Yersinia pseudotuberculosis strain EP2/+ chromosome, complete genome	3	1059271-1059354	3	CRISPRCasFinder	no		DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Orphan	TAAGCTGCCTGTACGGCAGTGAAC	24	0	0	NA	NA	I-F	1	1	Orphan	DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA|101aa|up_9|NZ_CP009759.1_1045871_1046174_+,NA|286aa|down_3|NZ_CP009759.1_1069391_1070249_+,NA|84aa|down_6|NZ_CP009759.1_1071250_1071502_-,NA|80aa|down_7|NZ_CP009759.1_1071540_1071780_-,NA|41aa|down_9|NZ_CP009759.1_1074628_1074751_+	NA|101aa|up_9|NZ_CP009759.1_1045871_1046174_+	NA	NA|272aa|up_8|NZ_CP009759.1_1046376_1047192_-	COG3718, IolB, Uncharacterized enzyme involved in inositol metabolism [Carbohydrate transport and metabolism]	NA|307aa|up_7|NZ_CP009759.1_1047201_1048122_-	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase	NA|343aa|up_6|NZ_CP009759.1_1049568_1050597_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|516aa|up_5|NZ_CP009759.1_1050608_1052156_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|310aa|up_4|NZ_CP009759.1_1052204_1053134_-	cd19968, PBP1_ABC_IbpA-like, periplasmic sugar-binding protein IbpA of an ABC transporter and similar proteins	NA|329aa|up_3|NZ_CP009759.1_1053277_1054264_-	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase	NA|642aa|up_2|NZ_CP009759.1_1054575_1056501_-	COG3962, COG3962, Acetolactate synthase [Amino acid transport and metabolism]	NA|509aa|up_1|NZ_CP009759.1_1056535_1058062_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|285aa|up_0|NZ_CP009759.1_1058408_1059263_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|1993aa|down_0|NZ_CP009759.1_1059862_1065841_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|771aa|down_1|NZ_CP009759.1_1065948_1068261_+	TIGR02073, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1C	NA|82aa|down_2|NZ_CP009759.1_1068473_1068719_-	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding	NA|286aa|down_3|NZ_CP009759.1_1069391_1070249_+	NA	NA|134aa|down_4|NZ_CP009759.1_1070241_1070643_+	pfam06836, DUF1240, Protein of unknown function (DUF1240)	NA|160aa|down_5|NZ_CP009759.1_1070747_1071227_-	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|84aa|down_6|NZ_CP009759.1_1071250_1071502_-	NA	NA|80aa|down_7|NZ_CP009759.1_1071540_1071780_-	NA	NA|639aa|down_8|NZ_CP009759.1_1072588_1074505_+	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain	NA|41aa|down_9|NZ_CP009759.1_1074628_1074751_+	NA
GCF_000834415.1_ASM83441v1	NZ_CP009759	Yersinia pseudotuberculosis strain EP2/+ chromosome, complete genome	4	1247032-1247141	4	CRISPRCasFinder	no		DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Orphan	ACACTAACCTGCTACAGACGTTAACCTGATGCAGACACTAAC	42	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA|61aa|up_1|NZ_CP009759.1_1244970_1245153_+,NA	NA|323aa|up_9|NZ_CP009759.1_1234620_1235589_-	PRK13022, secF, protein translocase subunit SecF	NA|616aa|up_8|NZ_CP009759.1_1235599_1237447_-	PRK05812, secD, preprotein translocase subunit SecD; Reviewed	NA|112aa|up_7|NZ_CP009759.1_1237474_1237810_-	PRK05585, yajC, preprotein translocase subunit YajC; Validated	NA|375aa|up_6|NZ_CP009759.1_1237921_1239046_-	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional	NA|357aa|up_5|NZ_CP009759.1_1239138_1240209_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|201aa|up_4|NZ_CP009759.1_1241352_1241955_+	PRK15000, PRK15000, peroxiredoxin C	NA|588aa|up_3|NZ_CP009759.1_1242343_1244107_+	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|227aa|up_2|NZ_CP009759.1_1244314_1244995_-	PRK08177, PRK08177, SDR family oxidoreductase	NA|61aa|up_1|NZ_CP009759.1_1244970_1245153_+	NA	NA|610aa|up_0|NZ_CP009759.1_1245149_1246979_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|465aa|down_0|NZ_CP009759.1_1247591_1248986_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|down_1|NZ_CP009759.1_1249061_1250381_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|361aa|down_2|NZ_CP009759.1_1250854_1251937_-	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|439aa|down_3|NZ_CP009759.1_1251958_1253275_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|down_4|NZ_CP009759.1_1253299_1253989_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|415aa|down_5|NZ_CP009759.1_1254256_1255501_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1230aa|down_6|NZ_CP009759.1_1255497_1259187_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|305aa|down_7|NZ_CP009759.1_1259531_1260446_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|304aa|down_8|NZ_CP009759.1_1260778_1261690_+	PRK00321, rdgC, recombination associated protein; Reviewed	NA|96aa|down_9|NZ_CP009759.1_1261911_1262199_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase
GCF_000834415.1_ASM83441v1	NZ_CP009759	Yersinia pseudotuberculosis strain EP2/+ chromosome, complete genome	5	1337896-1337998	5	CRISPRCasFinder	no		DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Orphan	TTACAACGCGCAATTTCTGTGTTTCGCGCACAGCAAAA	38	1	1	1337934-1337960	NZ_CP009759.1_2034998-2035024	NA	1	1	Orphan	DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA,NA|62aa|down_0|NZ_CP009759.1_1343242_1343428_+	NA|114aa|up_9|NZ_CP009759.1_1326090_1326432_+	PRK10408, PRK10408, L-valine transporter subunit YgaH	NA|171aa|up_8|NZ_CP009759.1_1326603_1327116_+	PRK10870, PRK10870, transcriptional repressor MprA; Provisional	NA|391aa|up_7|NZ_CP009759.1_1327499_1328672_+	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA|512aa|up_6|NZ_CP009759.1_1328710_1330246_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|389aa|up_5|NZ_CP009759.1_1330388_1331555_-	PRK10864, PRK10864, putative methyltransferase; Provisional	NA|146aa|up_4|NZ_CP009759.1_1331806_1332244_+	PRK10996, PRK10996, thioredoxin 2; Provisional	NA|250aa|up_3|NZ_CP009759.1_1332413_1333163_+	COG3148, COG3148, Uncharacterized conserved protein [Function unknown]	NA|881aa|up_2|NZ_CP009759.1_1333205_1335848_+	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion]	NA|452aa|up_1|NZ_CP009759.1_1336023_1337379_+	PRK09428, pssA, CDP-diacylglycerol--serine O-phosphatidyltransferase	NA|114aa|up_0|NZ_CP009759.1_1337440_1337782_+	PRK10759, PRK10759, YfiM family lipoprotein	NA|62aa|down_0|NZ_CP009759.1_1343242_1343428_+	NA	NA|858aa|down_1|NZ_CP009759.1_1343753_1346327_-	PRK10865, PRK10865, ATP-dependent chaperone ClpB	NA|244aa|down_2|NZ_CP009759.1_1346456_1347188_-	PRK10723, PRK10723, polyphenol oxidase	NA|326aa|down_3|NZ_CP009759.1_1347189_1348167_-	PRK11180, rluD, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA|244aa|down_4|NZ_CP009759.1_1348302_1349034_+	PRK10866, PRK10866, outer membrane protein assembly factor BamD	NA|121aa|down_5|NZ_CP009759.1_1349388_1349751_+	PRK10324, PRK10324, ribosome-associated translation inhibitor RaiA	NA|386aa|down_6|NZ_CP009759.1_1350112_1351270_+	PRK10622, pheA, bifunctional chorismate mutase/prephenate dehydratase; Provisional	NA|374aa|down_7|NZ_CP009759.1_1351374_1352496_-	PRK11199, tyrA, bifunctional chorismate mutase/prephenate dehydrogenase; Provisional	NA|357aa|down_8|NZ_CP009759.1_1352508_1353579_-	PRK12755, PRK12755, phospho-2-dehydro-3-deoxyheptonate aldolase; Provisional	NA|239aa|down_9|NZ_CP009759.1_1353811_1354528_+	PRK11697, PRK11697, two-component system response regulator BtsR
GCF_000834415.1_ASM83441v1	NZ_CP009759	Yersinia pseudotuberculosis strain EP2/+ chromosome, complete genome	6	2270087-2270198	6	CRISPRCasFinder	no		DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Orphan	AAAGCACATTTGAGCAGCGAGTGAAG	26	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|268aa|up_9|NZ_CP009759.1_2253565_2254369_-	COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]	NA|443aa|up_8|NZ_CP009759.1_2254433_2255762_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|603aa|up_7|NZ_CP009759.1_2255837_2257646_-	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]	NA|206aa|up_6|NZ_CP009759.1_2257811_2258429_-	pfam06438, HasA, Heme-binding protein A (HasA)	NA|831aa|up_5|NZ_CP009759.1_2258650_2261143_-	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein	NA|458aa|up_4|NZ_CP009759.1_2261741_2263115_-	PRK04833, PRK04833, argininosuccinate lyase; Provisional	NA|258aa|up_3|NZ_CP009759.1_2263281_2264055_-	cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis	NA|335aa|up_2|NZ_CP009759.1_2264237_2265242_-	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|388aa|up_1|NZ_CP009759.1_2265492_2266656_+	PRK05111, PRK05111, acetylornithine deacetylase; Provisional	NA|879aa|up_0|NZ_CP009759.1_2267029_2269666_+	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed	NA|295aa|down_0|NZ_CP009759.1_2270487_2271372_-	PRK09432, metF, methylenetetrahydrofolate reductase	NA|812aa|down_1|NZ_CP009759.1_2271604_2274040_-	PRK09466, metL, bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional	NA|387aa|down_2|NZ_CP009759.1_2274042_2275203_-	PRK08045, PRK08045, cystathionine gamma-synthase; Provisional	NA|106aa|down_3|NZ_CP009759.1_2275580_2275898_+	PRK05264, PRK05264, met regulon transcriptional regulator MetJ	NA|152aa|down_4|NZ_CP009759.1_2276246_2276702_+	COG4682, COG4682, Predicted membrane protein [Function unknown]	NA|72aa|down_5|NZ_CP009759.1_2277226_2277442_-	PRK00019, rpmE, 50S ribosomal protein L31; Reviewed	NA|733aa|down_6|NZ_CP009759.1_2277694_2279893_+	PRK05580, PRK05580, primosome assembly protein PriA; Validated	NA|343aa|down_7|NZ_CP009759.1_2280245_2281274_+	PRK11041, PRK11041, DNA-binding transcriptional regulator CytR; Provisional	NA|282aa|down_8|NZ_CP009759.1_2281339_2282185_+	PRK12757, PRK12757, cell division protein FtsN; Provisional	NA|175aa|down_9|NZ_CP009759.1_2282284_2282809_+	PRK05456, PRK05456, ATP-dependent protease subunit HslV
GCF_000834415.1_ASM83441v1	NZ_CP009759	Yersinia pseudotuberculosis strain EP2/+ chromosome, complete genome	7	2965193-2965445	2	PILER-CR	no		DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Orphan	AGGATAGGGCGCGAGGGGAATGACTGTCCACGACACTTTTCATAAAAGAAAG	52	0	0	NA	NA	NA	2	2	Orphan	DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|1486aa|up_9|NZ_CP009759.1_2949362_2953820_-	PRK11750, gltB, glutamate synthase subunit alpha; Provisional	NA|308aa|up_8|NZ_CP009759.1_2954642_2955566_+	COG1242, COG1242, Predicted Fe-S oxidoreductase [General function prediction only]	NA|779aa|up_7|NZ_CP009759.1_2955849_2958186_+	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	NA|218aa|up_6|NZ_CP009759.1_2958427_2959081_+	PRK11780, PRK11780, isoprenoid biosynthesis glyoxalase ElbB	NA|242aa|up_5|NZ_CP009759.1_2959077_2959803_+	PRK00056, mtgA, monofunctional biosynthetic peptidoglycan transglycosylase; Provisional	NA|192aa|up_4|NZ_CP009759.1_2960009_2960585_-	PRK11023, PRK11023, divisome-associated lipoprotein YraP	NA|197aa|up_3|NZ_CP009759.1_2960595_2961186_-	PRK10886, PRK10886, DnaA initiator-associating protein DiaA; Provisional	NA|118aa|up_2|NZ_CP009759.1_2961456_2961810_-	PRK12497, PRK12497, YraN family protein	NA|658aa|up_1|NZ_CP009759.1_2961908_2963882_-	COG3107, LppC, Putative lipoprotein [General function prediction only]	NA|300aa|up_0|NZ_CP009759.1_2963944_2964844_+	PRK14994, PRK14994, SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional	NA|235aa|down_0|NZ_CP009759.1_2965554_2966259_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|298aa|down_1|NZ_CP009759.1_2966520_2967414_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|329aa|down_2|NZ_CP009759.1_2967544_2968531_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|132aa|down_3|NZ_CP009759.1_2968616_2969012_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|95aa|down_4|NZ_CP009759.1_2969315_2969600_-	pfam13997, YqjK, YqjK-like protein	NA|132aa|down_5|NZ_CP009759.1_2969596_2969992_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_6|NZ_CP009759.1_2969994_2970300_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]	NA|127aa|down_7|NZ_CP009759.1_2970454_2970835_-	pfam06476, DUF1090, Protein of unknown function (DUF1090)	NA|130aa|down_8|NZ_CP009759.1_2971060_2971450_-	PRK10629, PRK10629, EnvZ/OmpR regulon moderator MzrA	NA|233aa|down_9|NZ_CP009759.1_2971446_2972145_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]
GCF_000834415.1_ASM83441v1	NZ_CP009759	Yersinia pseudotuberculosis strain EP2/+ chromosome, complete genome	8	4015096-4015207	7	CRISPRCasFinder	no		DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Orphan	TTTGAAGAAAATTCCTAATGGTTAATTAAT	30	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA|222aa|up_5|NZ_CP009759.1_4007326_4007992_-,NA	NA|365aa|up_9|NZ_CP009759.1_4001853_4002948_+	PRK10760, PRK10760, murein hydrolase B; Provisional	NA|201aa|up_8|NZ_CP009759.1_4004189_4004792_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|161aa|up_7|NZ_CP009759.1_4005164_4005647_-	COG5435, COG5435, Uncharacterized conserved protein [Function unknown]	NA|561aa|up_6|NZ_CP009759.1_4005643_4007326_-	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]	NA|222aa|up_5|NZ_CP009759.1_4007326_4007992_-	NA	NA|446aa|up_4|NZ_CP009759.1_4007988_4009326_-	pfam11397, GlcNAc, Glycosyltransferase (GlcNAc)	NA|344aa|up_3|NZ_CP009759.1_4009365_4010397_-	pfam00419, Fimbrial, Fimbrial protein	NA|398aa|up_2|NZ_CP009759.1_4010403_4011597_-	COG3515, COG3515, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|342aa|up_1|NZ_CP009759.1_4011695_4012721_-	COG3520, COG3520, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|627aa|up_0|NZ_CP009759.1_4012720_4014601_-	COG3519, COG3519, Type VI protein secretion system component VasA [Intracellular trafficking, secretion, and    vesicular transport]	NA|886aa|down_0|NZ_CP009759.1_4015385_4018043_+	TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family	NA|182aa|down_1|NZ_CP009759.1_4018253_4018799_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|254aa|down_2|NZ_CP009759.1_4018955_4019717_+	PRK09926, PRK09926, fimbrial chaperone	NA|891aa|down_3|NZ_CP009759.1_4019844_4022517_+	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|203aa|down_4|NZ_CP009759.1_4022501_4023110_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|175aa|down_5|NZ_CP009759.1_4023216_4023741_+	COG3516, COG3516, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|501aa|down_6|NZ_CP009759.1_4023764_4025267_+	COG3517, COG3517, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|162aa|down_7|NZ_CP009759.1_4025599_4026085_+	COG3157, Hcp, Type VI protein secretion system component Hcp (secreted cytotoxin) [Intracellular trafficking, secretion,    and vesicular transport]	NA|180aa|down_8|NZ_CP009759.1_4026358_4026898_+	COG3521, COG3521, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|450aa|down_9|NZ_CP009759.1_4026901_4028251_+	COG3522, COG3522, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]
GCF_000834415.1_ASM83441v1	NZ_CP009759	Yersinia pseudotuberculosis strain EP2/+ chromosome, complete genome	9	4209713-4211003	3,8,2,4	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	Type I-F	TTTCTAAGCTGCCTGTGCGGCAGTGAAC,GTTCACTGCCGCACAGGCAGCTTAGAAA,GTTCACTGCCGCACAGGCAGCTTAGAAA,CTTTCTAAGCTGCCTGTGCGGCAGTGAAC	28,28,28,29	0	0	NA	NA	I-F:I-F:I-F:I-F	18,21,21,18	21	TypeI-F	DinG,cas3,DEDDh,WYL,csa3,RT,cas1,cas3f,cas8f,cas5f,cas7f,cas6f	NA|372aa|up_2|NZ_CP009759.1_4205143_4206259_+,NA|425aa|up_1|NZ_CP009759.1_4206297_4207572_+,NA|70aa|down_9|NZ_CP009759.1_4222802_4223012_+	NA|463aa|up_9|NZ_CP009759.1_4197041_4198430_-	PRK15414, PRK15414, phosphomannomutase	NA|347aa|up_8|NZ_CP009759.1_4198446_4199487_-	cd06279, PBP1_LacI-like, ligand-binding domain of an uncharacterized transcription regulator from Corynebacterium glutamicum and its close homologs from other bacteria	NA|429aa|up_7|NZ_CP009759.1_4199758_4201045_+	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|292aa|up_6|NZ_CP009759.1_4201153_4202029_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|275aa|up_5|NZ_CP009759.1_4202029_4202854_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|352aa|up_4|NZ_CP009759.1_4203000_4204056_+	cd18612, GH130_Lin0857-like, Glycoside hydrolase family 130 such as Listeria innocua beta-1,2-mannobiose phosphorylase	NA|313aa|up_3|NZ_CP009759.1_4204082_4205021_+	pfam08950, DUF1861, Protein of unknown function (DUF1861)	NA|372aa|up_2|NZ_CP009759.1_4205143_4206259_+	NA	NA|425aa|up_1|NZ_CP009759.1_4206297_4207572_+	NA	NA|415aa|up_0|NZ_CP009759.1_4208130_4209375_-	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	cas1|327aa|down_0|NZ_CP009759.1_4211362_4212343_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1096aa|down_1|NZ_CP009759.1_4212339_4215627_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas8f|449aa|down_2|NZ_CP009759.1_4215782_4217129_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|317aa|down_3|NZ_CP009759.1_4217125_4218076_+	cd09676, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas7f|335aa|down_4|NZ_CP009759.1_4218093_4219098_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|down_5|NZ_CP009759.1_4219108_4219663_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|340aa|down_6|NZ_CP009759.1_4219740_4220760_-	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins	NA|168aa|down_7|NZ_CP009759.1_4220770_4221274_-	COG1795, COG1795, Formaldehyde-activating enzyme nesessary for methanogenesis [Energy    production and conversion]	NA|453aa|down_8|NZ_CP009759.1_4221320_4222679_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|70aa|down_9|NZ_CP009759.1_4222802_4223012_+	NA
