The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP007222	Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1903 chromosome, complete genome	4565462	974276	1042491	4565462	transposase,tRNA,plate,protease	Saccharomonospora_phage(18.18%)	56	NA	NA
WP_000753958.1|974276_975704_+|protease	serine endoprotease DegP	protease	A0A1B1IT49	uncultured_Mediterranean_phage	29.2	4.2e-26
WP_000929420.1|975856_977014_+	DNA-binding transcriptional regulator CdaR	NA	NA	NA	NA	NA
WP_000191147.1|977135_980105_-	viral enhancing factor	NA	A0A288QW20	Cyclophragma_undans_nucleopolyhedrovirus	25.8	1.4e-47
WP_000272193.1|980290_980677_-	DUF3461 family protein	NA	NA	NA	NA	NA
WP_000017173.1|980923_982225_+	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_001186673.1|982261_983086_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_001094519.1|983115_985788_-	bifunctional uridylyltransferase/uridylyl-removing protein GlnD	NA	NA	NA	NA	NA
WP_001018214.1|986025_986820_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_000246886.1|987270_987996_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_000808106.1|988253_989105_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_000224567.1|989249_989975_+	UMP kinase	NA	NA	NA	NA	NA
WP_000622423.1|990121_990679_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_000811899.1|990820_992017_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_000947413.1|992329_993088_+	(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase	NA	R9W0U9	Flavobacterium_phage	42.2	1.9e-25
WP_000922425.1|993100_993958_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000949017.1|993969_995322_+|protease	sigma E protease regulator RseP	protease	NA	NA	NA	NA
WP_001240931.1|995353_997786_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_000758966.1|997908_998394_+	molecular chaperone Skp	NA	NA	NA	NA	NA
WP_001139265.1|998397_999423_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_000210741.1|999528_999984_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_000565950.1|999987_1000776_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_000741216.1|1000775_1001924_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_000569411.1|1001920_1002517_+	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	39.3	4.3e-25
WP_001294832.1|1002540_1006023_+	DNA polymerase III subunit alpha	NA	Q8W6C3	Saccharomonospora_phage	36.8	3.7e-209
WP_000055753.1|1006035_1006995_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA	NA
WP_000524168.1|1007173_1008937_+	chitinase	NA	NA	NA	NA	NA
WP_001021042.1|1009012_1011154_+	lysine decarboxylase LdcC	NA	NA	NA	NA	NA
WP_000901088.1|1011209_1011599_+	VOC family protein	NA	NA	NA	NA	NA
WP_000210068.1|1011661_1012954_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_000062330.1|1013037_1013298_-	Rho-binding antiterminator	NA	NA	NA	NA	NA
WP_001518678.1|1013284_1013485_-	YaeP family protein	NA	NA	NA	NA	NA
WP_001185319.1|1013682_1014228_+	YaeQ family protein	NA	NA	NA	NA	NA
WP_000560524.1|1014224_1014647_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_000252581.1|1014678_1015380_+	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA	NA
WP_001260672.1|1015453_1017172_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000093989.1|1017282_1017990_-|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
WP_001202315.1|1017986_1018391_-	Rcs stress response system protein RcsF	NA	NA	NA	NA	NA
WP_000874215.1|1018509_1019325_-	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA	NA
WP_001287486.1|1019363_1020017_-	methionine ABC transporter permease MetI	NA	NA	NA	NA	NA
WP_000594021.1|1020009_1021041_-	methionine ABC transporter ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	40.2	5.5e-36
WP_001140160.1|1021230_1021797_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_000502119.1|1027754_1028213_+|transposase	IS200/IS605-like element IS200F family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	1.0e-13
WP_000154880.1|1028450_1029254_+	2,5-didehydrogluconate reductase DkgB	NA	A0A1V0SDE7	Indivirus	35.0	3.0e-37
WP_000648538.1|1029274_1030189_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001127559.1|1030293_1031469_+	MFS transporter	NA	NA	NA	NA	NA
WP_001230970.1|1031600_1032401_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_000207221.1|1032478_1033249_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000644706.1|1033304_1034672_-	murein transglycosylase D	NA	A0A0A7NU10	Lactobacillus_phage	33.0	1.4e-10
WP_001052773.1|1034743_1035499_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_000801238.1|1035533_1036256_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000917872.1|1036252_1036720_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	58.9	4.7e-51
WP_001562201.1|1036783_1037515_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	39.0	9.9e-40
WP_000367618.1|1038045_1039095_-	ImpA family type VI secretion system protein	NA	NA	NA	NA	NA
WP_000145238.1|1039105_1040101_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_000371485.1|1040097_1041981_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_000108008.1|1041996_1042491_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 2
NZ_CP007222	Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1903 chromosome, complete genome	4565462	1702106	1793848	4565462	plate,portal,tail,terminase,head,tRNA,capsid,protease,holin	Salmonella_phage(39.68%)	105	NA	NA
WP_001154025.1|1702106_1702910_+|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
WP_001288828.1|1702902_1704225_+	chromosome partition protein MukF	NA	NA	NA	NA	NA
WP_000060024.1|1704205_1704910_+	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_044782368.1|1704909_1709376_+	chromosome partition protein MukB	NA	NA	NA	NA	NA
WP_000925878.1|1709720_1711568_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_000357052.1|1711827_1712376_+	YcbK family protein	NA	A0A0K1LKR7	Rhodobacter_phage	33.7	1.2e-05
WP_001109471.1|1712403_1713051_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_023892333.1|1713112_1714303_-	aspartate transaminase	NA	NA	NA	NA	NA
WP_000977709.1|1714487_1715579_-	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	51.7	1.7e-99
WP_000117867.1|1716185_1717586_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2K9V902	Bandra_megavirus	35.8	4.5e-81
WP_000191414.1|1717754_1718957_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_001262307.1|1719151_1720444_-	DUF3596 domain-containing protein	NA	S4TSP2	Salmonella_phage	100.0	3.4e-253
WP_000065276.1|1720488_1720737_-	excisionase family protein	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
WP_023137795.1|1720777_1721017_-	DUF4060 family protein	NA	S4TR31	Salmonella_phage	96.2	2.8e-36
WP_044782371.1|1721022_1721892_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A0M4R347	Salmonella_phage	95.2	3.3e-159
WP_023137793.1|1721888_1722569_-	YqaJ viral recombinase family protein	NA	A0A0M3ULE0	Salmonella_phage	99.1	1.0e-131
WP_001528698.1|1722565_1723351_-	phage recombination protein Bet	NA	A0A0M4RD39	Salmonella_phage	98.9	4.8e-149
WP_023137792.1|1723356_1723653_-	host-nuclease inhibitor protein Gam	NA	A0A0M5M5Z9	Salmonella_phage	98.0	3.4e-47
WP_000565271.1|1723733_1723883_-	host cell division inhibitory peptide Kil	NA	NA	NA	NA	NA
WP_044782372.1|1723875_1724148_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071845790.1|1724234_1724549_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000438989.1|1724963_1725170_+	hypothetical protein	NA	K7P7I0	Enterobacteria_phage	69.1	9.6e-17
WP_000210935.1|1725205_1726033_-	DUF3037 domain-containing protein	NA	NA	NA	NA	NA
WP_000439052.1|1726029_1726779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000169862.1|1726929_1727397_-	helix-turn-helix domain-containing protein	NA	K7PHG0	Enterobacteria_phage	83.9	3.9e-66
WP_000145711.1|1727410_1727638_+	helix-turn-helix domain-containing protein	NA	K7PKS2	Enterobacteria_phage	95.9	1.5e-34
WP_015702794.1|1727603_1727978_+	hypothetical protein	NA	S4TTD7	Salmonella_phage	98.4	3.3e-63
WP_000024043.1|1728069_1728906_+	replication protein	NA	K7PGT1	Enterobacteria_phage	47.4	7.6e-52
WP_044782375.1|1728902_1729598_+	phage replication protein P	NA	G8C7U6	Escherichia_phage	45.4	1.2e-55
WP_044782377.1|1730186_1730432_+	hypothetical protein	NA	A0A1V0E5L1	Salmonella_phage	92.4	1.0e-33
WP_044782378.1|1730428_1730830_+	ParB/RepB/Spo0J family partition protein	NA	S4TTI6	Salmonella_phage	99.2	6.4e-73
WP_071845791.1|1730805_1731687_+	ead/Ea22-like family protein	NA	A0A2H4A316	Salmonella_phage	97.4	1.1e-56
WP_016062829.1|1731686_1732442_+	hypothetical protein	NA	H6WRY1	Salmonella_phage	100.0	1.1e-150
WP_023137787.1|1732484_1732778_+	hypothetical protein	NA	A0A1V0E5L2	Salmonella_phage	96.9	2.7e-49
WP_023137786.1|1732774_1732951_+	hypothetical protein	NA	A0A1V0E5L6	Salmonella_phage	95.6	5.3e-16
WP_014344025.1|1733063_1733255_+	hypothetical protein	NA	G8C7S2	Escherichia_phage	68.9	1.1e-17
WP_001217669.1|1733513_1733747_+	DinI family protein	NA	H6WRY5	Salmonella_phage	100.0	5.6e-37
WP_014343878.1|1733863_1734112_+	hypothetical protein	NA	A0A0U2C0C8	Salmonella_phage	100.0	1.6e-42
WP_000929790.1|1734146_1734749_+	DUF1367 family protein	NA	S4TTI0	Salmonella_phage	99.5	7.5e-110
WP_023137785.1|1734957_1735569_+	recombination protein NinG	NA	A0A0M4RU10	Salmonella_phage	97.5	1.2e-91
WP_023137784.1|1735565_1735706_+	YlcG family protein	NA	A0A0M5M7B2	Salmonella_phage	76.3	2.1e-07
WP_044782379.1|1735702_1736380_+	antiterminator	NA	I6PDF8	Cronobacter_phage	54.0	1.3e-62
WP_077918655.1|1736768_1737425_+	ORF6N domain-containing protein	NA	A0A088CD42	Shigella_phage	68.8	2.1e-41
WP_162491380.1|1737642_1737984_+|holin	phage holin, lambda family	holin	Q8SBE1	Shigella_phage	80.4	1.6e-45
WP_044782382.1|1737986_1738613_+	glycoside hydrolase family 19 protein	NA	Q858F0	Salmonella_phage	80.7	7.1e-95
WP_044782383.1|1738609_1739149_+	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	47.9	4.8e-07
WP_044782384.1|1739191_1739569_+	hypothetical protein	NA	Q6UAR9	Klebsiella_phage	67.7	8.4e-43
WP_001070544.1|1739665_1739893_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024147208.1|1740027_1740372_+	HNH endonuclease	NA	K7P7P6	Enterobacteria_phage	73.9	8.8e-47
WP_044782386.1|1740504_1740969_+|terminase	phage terminase small subunit P27 family	terminase	Q9B019	Phage_GMSE-1	62.1	2.2e-48
WP_031234234.1|1740922_1742665_+|terminase	terminase large subunit	terminase	A0A0U2C138	Paracoccus_phage	44.4	5.9e-139
WP_000002706.1|1742664_1743969_+|portal	phage portal protein	portal	K7PJU5	Enterobacteria_phage	86.9	5.1e-220
WP_044782388.1|1743982_1744831_+|protease	Clp protease ClpP	protease	K7PH05	Enterobacteria_phage	87.9	9.8e-132
WP_044782389.1|1744840_1746058_+|capsid	phage major capsid protein	capsid	K7PM57	Enterobacteria_phage	89.1	2.7e-199
WP_000691032.1|1746101_1746344_+	hypothetical protein	NA	K7PHI6	Enterobacteria_phage	66.0	2.7e-10
WP_000886224.1|1746343_1746667_+|head,tail	phage gp6-like head-tail connector protein	head,tail	K7PKT4	Enterobacteria_phage	57.4	2.2e-31
WP_001255650.1|1746678_1747092_+|head	phage head closure protein	head	A0A192Y6C2	Salmonella_phage	74.8	3.5e-50
WP_044782390.1|1747063_1747573_+	hypothetical protein	NA	Q8HAC8	Salmonella_phage	85.8	8.9e-80
WP_000779279.1|1747569_1748130_+	hypothetical protein	NA	M1FQV7	Enterobacteria_phage	99.5	2.3e-105
WP_000497751.1|1748138_1748309_+	DUF2635 domain-containing protein	NA	Q8SBH3	Shigella_phage	100.0	9.3e-26
WP_022630977.1|1748292_1749789_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	M1FN90	Enterobacteria_phage	99.0	7.7e-273
WP_000090998.1|1749788_1750145_+|tail	phage tail tube protein	tail	U5P076	Shigella_phage	100.0	5.3e-63
WP_000661047.1|1750144_1750414_+|tail	phage tail assembly protein	tail	S5FNR3	Shigella_phage	100.0	3.5e-43
WP_044782394.1|1750555_1752388_+|tail	phage tail tape measure protein	tail	S5FM63	Shigella_phage	99.0	1.0e-303
WP_001439754.1|1752469_1752982_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000219913.1|1753072_1754401_+	DNA circularization N-terminal domain-containing protein	NA	Q8SBG8	Shigella_phage	99.3	8.4e-247
WP_000999499.1|1754397_1755477_+|plate	baseplate protein	plate	Q8SBG7	Shigella_phage	99.7	5.3e-207
WP_022630975.1|1755476_1756025_+|plate	phage baseplate assembly protein	plate	U5P081	Shigella_phage	97.8	1.9e-96
WP_000424732.1|1756024_1756450_+	phage GP46 family protein	NA	U5P0R9	Shigella_phage	100.0	2.3e-81
WP_022630974.1|1756436_1757495_+|plate	baseplate J/gp47 family protein	plate	Q8SBG4	Shigella_phage	98.6	5.2e-199
WP_000383548.1|1757485_1758070_+	YmfQ family protein	NA	O22003	Shigella_phage	100.0	1.1e-113
WP_006678262.1|1758616_1759345_+	hypothetical protein	NA	A0A1B0V7G4	Salmonella_phage	100.0	2.8e-143
WP_044782397.1|1759346_1759754_+|tail	tail fiber assembly protein	tail	A0A1B0V844	Salmonella_phage	97.7	1.3e-70
WP_044782398.1|1759950_1760673_-	SPI-1 type III secretion system guanine nucleotide exchange factor SopE	NA	NA	NA	NA	NA
WP_038988979.1|1761152_1761953_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000497440.1|1762428_1762635_-	DinI-like family protein	NA	S4TNM0	Salmonella_phage	100.0	1.8e-31
WP_023217741.1|1763061_1765674_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.8	3.7e-20
WP_000291723.1|1765881_1766892_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_001220671.1|1767057_1767600_+	cell division protein ZapC	NA	NA	NA	NA	NA
WP_000224062.1|1767596_1768706_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_001086481.1|1768804_1770913_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
WP_000053043.1|1770925_1772833_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
WP_000333143.1|1772847_1774101_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
WP_000433409.1|1774105_1775746_+	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
WP_000759136.1|1775742_1776306_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_001537784.1|1776561_1776729_+	ribosome modulation factor	NA	NA	NA	NA	NA
WP_000227928.1|1776828_1777347_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
WP_000156458.1|1777415_1779176_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
WP_000877172.1|1779361_1779814_+	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_001562588.1|1779885_1780938_-	porin OmpA	NA	NA	NA	NA	NA
WP_000288730.1|1781294_1781804_-	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_001202375.1|1782020_1782626_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_000950869.1|1782612_1784766_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_001261222.1|1784784_1785231_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_000420527.1|1785354_1787409_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	27.6	1.4e-19
WP_000424187.1|1787444_1787903_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_000847732.1|1787997_1788660_-	DUF2057 family protein	NA	NA	NA	NA	NA
WP_001537782.1|1788833_1789247_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_000561983.1|1789291_1789609_-	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_000140476.1|1789666_1790878_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA	NA
WP_000859428.1|1791092_1791641_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_000548087.1|1791666_1792446_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000072884.1|1792494_1792776_+	acylphosphatase	NA	NA	NA	NA	NA
WP_000904446.1|1792772_1793102_-	sulfurtransferase TusE	NA	NA	NA	NA	NA
WP_000374046.1|1793188_1793848_-|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	52.4	2.7e-44
>prophage 3
NZ_CP007222	Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1903 chromosome, complete genome	4565462	1947907	1962189	4565462	tail	Escherichia_phage(50.0%)	18	NA	NA
WP_000444505.1|1947907_1949158_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	100.0	3.8e-23
WP_000340437.1|1949281_1949896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001180571.1|1950417_1950882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001130332.1|1950856_1951318_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071585783.1|1951266_1951671_+|tail	phage tail protein	tail	A0A0F7LBW5	Escherichia_phage	96.0	2.4e-64
WP_001008237.1|1951691_1952135_+|tail	tail assembly chaperone	tail	A0A0F7LDZ0	Escherichia_phage	99.3	1.8e-81
WP_001115580.1|1952708_1953227_-|tail	tail fiber protein	tail	A0A0F7LCR3	Escherichia_phage	60.9	2.9e-54
WP_000905000.1|1953256_1953811_+	site-specific DNA recombinase	NA	A0A1S6L009	Salmonella_phage	88.9	4.4e-88
WP_000557907.1|1953917_1954751_+	5-methylcytosine-specific endonuclease McrA	NA	NA	NA	NA	NA
WP_072102280.1|1954984_1955149_+	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	90.7	9.6e-20
WP_000917275.1|1955595_1956720_+	type III secretion system effector SopF	NA	NA	NA	NA	NA
WP_000275698.1|1957769_1958183_+	subtilase cytotoxin subunit B	NA	A0A0U2KD34	Escherichia_phage	37.7	5.5e-19
WP_000733298.1|1958199_1958928_+	pertussis-like toxin subunit ArtA	NA	A0A0U2KD26	Escherichia_phage	52.5	1.2e-61
WP_000158844.1|1959120_1959663_+	glycoside hydrolase family 108 protein	NA	A0A0U2S643	Escherichia_phage	66.5	8.1e-71
WP_001277616.1|1959810_1960188_-	DUF1353 domain-containing protein	NA	I1TQ41	Pseudomonas_phage	38.4	2.2e-14
WP_001529135.1|1960260_1961070_-	cytolethal distending toxin S-CDT	NA	A5LH53	Enterobacteria_phage	50.0	2.1e-62
WP_001036547.1|1961567_1961732_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000497452.1|1961949_1962189_-	virulence protein MsgA	NA	K7P6H1	Enterobacteria_phage	87.3	2.5e-32
>prophage 4
NZ_CP007222	Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1903 chromosome, complete genome	4565462	2418622	2425523	4565462		Salmonella_phage(28.57%)	11	NA	NA
WP_077905325.1|2418622_2418937_-	recombinase family protein	NA	A0A1S6L009	Salmonella_phage	86.1	4.3e-40
WP_000727929.1|2419315_2419741_-	peptidase	NA	NA	NA	NA	NA
WP_001640522.1|2419667_2419967_-	pertussis toxin subunit	NA	A0A0U2KD26	Escherichia_phage	55.7	8.5e-14
WP_001605117.1|2420005_2420146_-	hypothetical protein	NA	A0A0U2KD26	Escherichia_phage	77.1	6.5e-09
WP_001557003.1|2420561_2420735_-	recombination protein NinG	NA	S4TSR3	Salmonella_phage	80.6	4.9e-22
WP_000802712.1|2421043_2421928_+	hypothetical protein	NA	A0A0P0ZCT1	Stx2-converting_phage	37.7	2.1e-36
WP_001135892.1|2422168_2422342_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001543117.1|2422307_2422709_-	DUF4102 domain-containing protein	NA	K7PGY1	Enterobacteria_phage	58.4	8.4e-33
WP_001146139.1|2422832_2423723_+	peptide ABC transporter permease SapC	NA	NA	NA	NA	NA
WP_001128869.1|2423722_2424715_+	peptide ABC transporter ATP-binding protein SapD	NA	NA	NA	NA	NA
WP_000230462.1|2424716_2425523_+	peptide ABC transporter ATP-binding protein SapF	NA	G3M9Y6	Bacillus_virus	27.4	4.6e-14
>prophage 5
NZ_CP007222	Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1903 chromosome, complete genome	4565462	2711734	2719001	4565462		Morganella_phage(33.33%)	8	NA	NA
WP_001157316.1|2711734_2713165_-	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.4	7.8e-105
WP_000377052.1|2713238_2713934_-	phosphohydrolase	NA	S4W232	Pandoravirus	28.0	1.6e-07
WP_000107430.1|2714025_2714325_-	membrane protein	NA	NA	NA	NA	NA
WP_001080686.1|2714974_2716186_+	porin OmpC	NA	Q1MVN1	Enterobacteria_phage	56.2	2.6e-109
WP_024131109.1|2716444_2716633_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000208509.1|2716643_2716856_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	70.0	3.9e-21
WP_000457654.1|2717310_2718579_-	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	92.2	1.9e-227
WP_000394197.1|2718581_2719001_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
>prophage 6
NZ_CP007222	Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1903 chromosome, complete genome	4565462	2876175	2885346	4565462	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000195336.1|2876175_2878209_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
WP_000703136.1|2878449_2878908_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	73.2	7.6e-54
WP_001221799.1|2879079_2879610_+	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000950413.1|2879666_2880134_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
WP_000598637.1|2880180_2880900_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000272850.1|2880896_2882582_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
WP_001240416.1|2882804_2883536_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
WP_001261696.1|2883595_2883703_+	protein YohO	NA	NA	NA	NA	NA
WP_000824854.1|2883683_2884415_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569166.1|2884398_2885346_-	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	3.7e-10
