bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	6.1|2180927|36|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	94.44	36	2	0	1	36	757262	757227	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	7e-09	52.3	1.0	GAATGCCGATCCTTAGAGAGGCATTTGCTGAGTTTT	757227-757262	AAAACTCAGCGAATGCCTCTCTAAGGATTGGCATTC	2
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	6.1|2180927|36|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	94.44	36	2	0	1	36	2229386	2229351	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	7e-09	52.3	1.0	GAATGCCGATCCTTAGAGAGGCATTTGCTGAGTTTT	2229351-2229386	AAAACTCAGTGAATGCCTCTCTAAGGATCGGCATTC	2
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	6.1|2180927|36|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	94.44	36	2	0	1	36	2279090	2279055	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	7e-09	52.3	1.0	GAATGCCGATCCTTAGAGAGGCATTTGCTGAGTTTT	2279055-2279090	AAAACTCAGCAAATGGCTCTCTAAGGATTGGCATTC	2
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	6.1|2180927|36|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	94.44	36	2	0	1	36	2516859	2516894	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	7e-09	52.3	1.0	GAATGCCGATCCTTAGAGAGGCATTTGCTGAGTTTT	2516859-2516894	GAATGCCAATCCTTAGAGAGGCATTCGCTGAGTTTT	2
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	6.1|2180927|36|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	94.44	36	2	0	1	36	3230215	3230180	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	7e-09	52.3	1.0	GAATGCCGATCCTTAGAGAGGCATTTGCTGAGTTTT	3230180-3230215	AAAACTCAGCGAATGCCTCTCTAAAGATCGGCATTC	2
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	6.1|2180927|36|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	94.44	36	2	0	1	36	3826560	3826595	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	7e-09	52.3	1.0	GAATGCCGATCCTTAGAGAGGCATTTGCTGAGTTTT	3826560-3826595	GAATGCCGATCCTTAAAGAGGCATTCGCTGAGTTTT	2
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	9.2|3203049|37|NZ_CP006723|PILER-CR,CRISPRCasFinder,CRT	NZ_CP006725.1	Leptospira interrogans serovar Linhai str. 56609 plasmid lcp1, complete sequence	97.30	37	1	0	1	37	34197	34233	no crispr array in hit genome!	7e-12	57.1	1.0	GATCAAGGGCGAAAACTTCCGGCGGAAATTACGACGG	34197-34233	GATCAAGAGCGAAAACTTCCGGCGGAAATTACGACGG	1
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	9.14|3203908|34|NZ_CP006723|PILER-CR,CRISPRCasFinder,CRT	NZ_CP006725.1	Leptospira interrogans serovar Linhai str. 56609 plasmid lcp1, complete sequence	100.00	34	0	0	1	34	31227	31260	no crispr array in hit genome!	2e-11	55.5	1.0	GAATACAACCTCTTCAAAAAAGAGGAACCGGCGT	31227-31260	GAATACAACCTCTTCAAAAAAGAGGAACCGGCGT	0
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	16.1|3414495|46|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	100.00	46	0	0	1	46	1691986	1692031	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	3e-15	74.5	1.0	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	1691986-1692031	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	0
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	16.1|3414495|46|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	100.00	46	0	0	1	46	1692057	1692102	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	3e-15	74.5	1.0	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	1692057-1692102	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	0
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	16.1|3414495|46|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	100.00	46	0	0	1	46	1692128	1692173	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	3e-15	74.5	1.0	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	1692128-1692173	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	0
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	16.1|3414495|46|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	100.00	46	0	0	1	46	1692199	1692244	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	3e-15	74.5	1.0	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	1692199-1692244	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	0
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	16.1|3414495|46|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	100.00	46	0	0	1	46	1692270	1692315	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	3e-15	74.5	1.0	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	1692270-1692315	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	0
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	16.1|3414495|46|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	100.00	46	0	0	1	46	1692341	1692386	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	3e-15	74.5	1.0	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	1692341-1692386	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	0
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	16.1|3414495|46|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	100.00	46	0	0	1	46	3186547	3186592	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	3e-15	74.5	1.0	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	3186547-3186592	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	0
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	16.1|3414495|46|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	100.00	46	0	0	1	46	4043652	4043697	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	3e-15	74.5	1.0	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	4043652-4043697	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	0
NZ_CP006723	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	16.1|3414495|46|NZ_CP006723|CRISPRCasFinder	NZ_CP006723.1	Leptospira interrogans serovar Linhai str. 56609 chromosome 1, complete sequence	100.00	46	0	0	1	46	4043722	4043767	1229257-1229359|1480232-1480345|1765159-1765259|1939284-1939383|2086560-2086650|2180892-2180997|2877477-2877643|2877753-2878056|3202940-3204122|3204280-3204387|3204542-3204791|3204948-3205340|3205823-3206003|3206161-3206482|3206638-3206887|3414470-3414565|3511815-3511909	3e-15	74.5	1.0	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	4043722-4043767	AACGCGACCTGCAGAGCGACCCTTAGGGAGCGATGCATTGAGTTTG	0
