assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000953355.1_XNC2	NZ_LN681227	Xenorhabdus nematophila AN6/1 chromosome I	1	1813975-1814065	1	CRISPRCasFinder	no	DEDDh	cas14j,DEDDh,DinG,WYL,PD-DExK,RT,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Unclear	CGGTTTATCCCCGTACTTACGGGGAACAC	29	1	1	1814004-1814035	NZ_LN681227.1_881837-881868	NA	1	1	Orphan	cas14j,DEDDh,DinG,WYL,PD-DExK,RT,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|212aa|down_3|NZ_LN681227.1_1821042_1821678_+	NA|127aa|up_9|NZ_LN681227.1_1802289_1802670_+	PRK10824, PRK10824, Grx4 family monothiol glutaredoxin	DEDDh|220aa|up_8|NZ_LN681227.1_1802743_1803403_-	PRK05168, PRK05168, ribonuclease T; Provisional	NA|136aa|up_7|NZ_LN681227.1_1803582_1803990_-	TIGR00068, Lactoylglutathione_lyase, lactoylglutathione lyase	NA|80aa|up_6|NZ_LN681227.1_1804304_1804544_+	COG3313, COG3313, Predicted Fe-S protein [General function prediction only]	NA|146aa|up_5|NZ_LN681227.1_1805222_1805660_+	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional	NA|158aa|up_4|NZ_LN681227.1_1805852_1806326_-	COG3133, SlyB, Outer membrane lipoprotein [Cell envelope biogenesis, outer membrane]	NA|370aa|up_3|NZ_LN681227.1_1806659_1807769_+	PRK09585, anmK, anhydro-N-acetylmuramic acid kinase; Reviewed	NA|218aa|up_2|NZ_LN681227.1_1807843_1808497_+	PRK05679, PRK05679, pyridoxal 5'-phosphate synthase	NA|424aa|up_1|NZ_LN681227.1_1808859_1810131_+	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|293aa|up_0|NZ_LN681227.1_1810280_1811159_+	PRK05756, PRK05756, pyridoxal kinase PdxY	NA|323aa|down_0|NZ_LN681227.1_1817243_1818212_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|341aa|down_1|NZ_LN681227.1_1818485_1819508_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|158aa|down_2|NZ_LN681227.1_1820542_1821016_-	pfam13551, HTH_29, Winged helix-turn helix	NA|212aa|down_3|NZ_LN681227.1_1821042_1821678_+	NA	NA|349aa|down_4|NZ_LN681227.1_1821803_1822850_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|143aa|down_5|NZ_LN681227.1_1822797_1823226_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|192aa|down_6|NZ_LN681227.1_1823296_1823872_-	PRK08118, PRK08118, DNA topology modulation protein	NA|118aa|down_7|NZ_LN681227.1_1827335_1827689_-	pfam10709, DUF2511, Protein of unknown function (DUF2511)	NA|333aa|down_8|NZ_LN681227.1_1827773_1828772_-	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism]	NA|129aa|down_9|NZ_LN681227.1_1828771_1829158_-	COG2372, CopC, Uncharacterized protein, homolog of Cu resistance protein CopC [General function prediction only]
GCF_000953355.1_XNC2	NZ_LN681227	Xenorhabdus nematophila AN6/1 chromosome I	2	1814199-1815691	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	DEDDh	cas14j,DEDDh,DinG,WYL,PD-DExK,RT,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Unclear	CGGTTTATCCCCGTACTTACGGGGAACAC,CGGTTTATCCCCGTACTTACGGGGAACAC,GGTTTATCCCCGTACTTACGGGGAACAC	29,29,28	2	2	1815509-1815540|1815509-1815541	NZ_LN681227.1_3544163-3544194|NZ_LN681227.1_3544163-3544195	NA:NA:NA	24,24,23	24	Orphan	cas14j,DEDDh,DinG,WYL,PD-DExK,RT,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|212aa|down_3|NZ_LN681227.1_1821042_1821678_+	NA|127aa|up_9|NZ_LN681227.1_1802289_1802670_+	PRK10824, PRK10824, Grx4 family monothiol glutaredoxin	DEDDh|220aa|up_8|NZ_LN681227.1_1802743_1803403_-	PRK05168, PRK05168, ribonuclease T; Provisional	NA|136aa|up_7|NZ_LN681227.1_1803582_1803990_-	TIGR00068, Lactoylglutathione_lyase, lactoylglutathione lyase	NA|80aa|up_6|NZ_LN681227.1_1804304_1804544_+	COG3313, COG3313, Predicted Fe-S protein [General function prediction only]	NA|146aa|up_5|NZ_LN681227.1_1805222_1805660_+	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional	NA|158aa|up_4|NZ_LN681227.1_1805852_1806326_-	COG3133, SlyB, Outer membrane lipoprotein [Cell envelope biogenesis, outer membrane]	NA|370aa|up_3|NZ_LN681227.1_1806659_1807769_+	PRK09585, anmK, anhydro-N-acetylmuramic acid kinase; Reviewed	NA|218aa|up_2|NZ_LN681227.1_1807843_1808497_+	PRK05679, PRK05679, pyridoxal 5'-phosphate synthase	NA|424aa|up_1|NZ_LN681227.1_1808859_1810131_+	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|293aa|up_0|NZ_LN681227.1_1810280_1811159_+	PRK05756, PRK05756, pyridoxal kinase PdxY	NA|323aa|down_0|NZ_LN681227.1_1817243_1818212_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|341aa|down_1|NZ_LN681227.1_1818485_1819508_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|158aa|down_2|NZ_LN681227.1_1820542_1821016_-	pfam13551, HTH_29, Winged helix-turn helix	NA|212aa|down_3|NZ_LN681227.1_1821042_1821678_+	NA	NA|349aa|down_4|NZ_LN681227.1_1821803_1822850_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|143aa|down_5|NZ_LN681227.1_1822797_1823226_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|192aa|down_6|NZ_LN681227.1_1823296_1823872_-	PRK08118, PRK08118, DNA topology modulation protein	NA|118aa|down_7|NZ_LN681227.1_1827335_1827689_-	pfam10709, DUF2511, Protein of unknown function (DUF2511)	NA|333aa|down_8|NZ_LN681227.1_1827773_1828772_-	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism]	NA|129aa|down_9|NZ_LN681227.1_1828771_1829158_-	COG2372, CopC, Uncharacterized protein, homolog of Cu resistance protein CopC [General function prediction only]
GCF_000953355.1_XNC2	NZ_LN681227	Xenorhabdus nematophila AN6/1 chromosome I	3	3577581-3578770	2,3,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	RT,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas14j,DEDDh,DinG,WYL,PD-DExK,RT,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	CGGTTTATCCCCGTACTTACGGGGAACACT,CGGTTTATCCCCGTACTTACGGGGAACAC,CGGTTTATCCCCGTACTTACGGGGAACAC,CGGTTTATCCCCGTACTTACGGGGAACAC	30,29,29,29	1	1	3577793-3577825	NZ_LN681227.1_2521314-2521346	NA:NA:NA:NA	17,19,19,17	19	TypeI-E	cas14j,DEDDh,DinG,WYL,PD-DExK,RT,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|97aa|up_8|NZ_LN681227.1_3569485_3569776_-,NA	NA|351aa|up_9|NZ_LN681227.1_3568512_3569565_-	PRK09501, potD, spermidine/putrescine ABC transporter periplasmic substrate-binding protein; Reviewed	NA|97aa|up_8|NZ_LN681227.1_3569485_3569776_-	NA	NA|260aa|up_7|NZ_LN681227.1_3569796_3570576_-	PRK09500, potC, spermidine/putrescine ABC transporter membrane protein; Reviewed	NA|287aa|up_6|NZ_LN681227.1_3570572_3571433_-	PRK09497, potB, spermidine/putrescine ABC transporter membrane protein; Reviewed	NA|372aa|up_5|NZ_LN681227.1_3571416_3572532_-	PRK09452, potA, spermidine/putrescine ABC transporter ATP-binding protein PotA	NA|444aa|up_4|NZ_LN681227.1_3572980_3574312_-	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional	NA|252aa|up_3|NZ_LN681227.1_3574384_3575140_-	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase	NA|247aa|up_2|NZ_LN681227.1_3575191_3575932_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|157aa|up_1|NZ_LN681227.1_3575928_3576399_-	PRK00203, rnhA, ribonuclease H; Reviewed	DEDDh|250aa|up_0|NZ_LN681227.1_3576462_3577212_+	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional	NA|100aa|down_0|NZ_LN681227.1_3579334_3579634_+	pfam01527, HTH_Tnp_1, Transposase	NA|133aa|down_1|NZ_LN681227.1_3579863_3580262_+	cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins	cas3|917aa|down_2|NZ_LN681227.1_3580314_3583065_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|539aa|down_3|NZ_LN681227.1_3583064_3584681_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|184aa|down_4|NZ_LN681227.1_3584673_3585225_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|346aa|down_5|NZ_LN681227.1_3585274_3586312_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|255aa|down_6|NZ_LN681227.1_3586325_3587090_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|226aa|down_7|NZ_LN681227.1_3587076_3587754_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|307aa|down_8|NZ_LN681227.1_3587753_3588674_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|down_9|NZ_LN681227.1_3588676_3588970_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional
GCF_000953355.1_XNC2	NZ_LN681227	Xenorhabdus nematophila AN6/1 chromosome I	4	3589054-3589936	4,3,4	CRISPRCasFinder,CRT,PILER-CR	no	DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas14j,DEDDh,DinG,WYL,PD-DExK,RT,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GAGGTCTCCGTAGGTACGGAGATAAACC,GAGGTCTCCGTAGGTACGGAGATAAACCG,GAGGTCTCCGTAGGTACGGAGATAAACC	28,29,28	0	0	NA	NA	NA:NA:NA	14,14,9	14	TypeI-E	cas14j,DEDDh,DinG,WYL,PD-DExK,RT,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|332aa|down_0|NZ_LN681227.1_3590425_3591421_+,NA|82aa|down_5|NZ_LN681227.1_3595254_3595500_-,NA|57aa|down_8|NZ_LN681227.1_3598720_3598891_-	NA|100aa|up_9|NZ_LN681227.1_3579334_3579634_+	pfam01527, HTH_Tnp_1, Transposase	NA|133aa|up_8|NZ_LN681227.1_3579863_3580262_+	cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins	cas3|917aa|up_7|NZ_LN681227.1_3580314_3583065_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|539aa|up_6|NZ_LN681227.1_3583064_3584681_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|184aa|up_5|NZ_LN681227.1_3584673_3585225_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|346aa|up_4|NZ_LN681227.1_3585274_3586312_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|255aa|up_3|NZ_LN681227.1_3586325_3587090_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|226aa|up_2|NZ_LN681227.1_3587076_3587754_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|307aa|up_1|NZ_LN681227.1_3587753_3588674_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_LN681227.1_3588676_3588970_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|332aa|down_0|NZ_LN681227.1_3590425_3591421_+	NA	NA|384aa|down_1|NZ_LN681227.1_3591420_3592572_+	COG4775, COG4775, Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane]	NA|374aa|down_2|NZ_LN681227.1_3592580_3593702_+	pfam13265, DUF4056, Protein of unknown function (DUF4056)	NA|157aa|down_3|NZ_LN681227.1_3593806_3594277_-	COG1846, MarR, Transcriptional regulators [Transcription]	NA|88aa|down_4|NZ_LN681227.1_3594590_3594854_-	cd14744, PAAR_CT_2, proline-alanine-alanine-arginine (PAAR) domain with uncharacterized C-terminal extension	NA|82aa|down_5|NZ_LN681227.1_3595254_3595500_-	NA	NA|193aa|down_6|NZ_LN681227.1_3596321_3596900_-	PRK15240, PRK15240, resistance to complement killing; Provisional	NA|425aa|down_7|NZ_LN681227.1_3597360_3598635_+	PRK06084, PRK06084, bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA|57aa|down_8|NZ_LN681227.1_3598720_3598891_-	NA	NA|174aa|down_9|NZ_LN681227.1_3598984_3599506_+	PRK09651, PRK09651, RNA polymerase sigma factor FecI; Provisional
