assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000954175.1_ASM95417v1	NZ_CP010973	Burkholderia pseudomallei strain vgh07 isolate human chromosome 1, complete sequence	1	608449-608571	1	PILER-CR	no	RT	RT,DEDDh,DinG,csa3,cas3,WYL	Unclear	GCGGCGGCGGTGGCGGCGGCG	21	0	0	NA	NA	NA	2	2	Orphan	RT,DEDDh,DinG,csa3,cas3,WYL	NA,NA|84aa|down_2|NZ_CP010973.1_611578_611830_-,NA|106aa|down_3|NZ_CP010973.1_612002_612320_-,NA|463aa|down_6|NZ_CP010973.1_616797_618186_-,NA|108aa|down_7|NZ_CP010973.1_618208_618532_-,NA|156aa|down_8|NZ_CP010973.1_618553_619021_-,NA|234aa|down_9|NZ_CP010973.1_619683_620385_+	NA|180aa|up_9|NZ_CP010973.1_595275_595815_-	COG1778, COG1778, Low specificity phosphatase (HAD superfamily) [General function prediction only]	NA|328aa|up_8|NZ_CP010973.1_595814_596798_-	PRK10892, PRK10892, arabinose-5-phosphate isomerase KdsD	NA|670aa|up_7|NZ_CP010973.1_596925_598935_+	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|188aa|up_6|NZ_CP010973.1_599018_599582_+	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|205aa|up_5|NZ_CP010973.1_599675_600290_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|286aa|up_4|NZ_CP010973.1_600302_601160_+	cd03676, Nudix_hydrolase_3, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|294aa|up_3|NZ_CP010973.1_601211_602093_+	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed	NA|362aa|up_2|NZ_CP010973.1_602392_603478_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|956aa|up_1|NZ_CP010973.1_603696_606564_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|396aa|up_0|NZ_CP010973.1_606777_607965_+	cd17472, MFS_YajR_like, Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily	NA|244aa|down_0|NZ_CP010973.1_608762_609494_-	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|527aa|down_1|NZ_CP010973.1_609836_611417_+	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain	NA|84aa|down_2|NZ_CP010973.1_611578_611830_-	NA	NA|106aa|down_3|NZ_CP010973.1_612002_612320_-	NA	RT|676aa|down_4|NZ_CP010973.1_612807_614835_-	cd01646, RT_Bac_retron_I, RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons	RT|449aa|down_5|NZ_CP010973.1_614872_616219_-	cd01646, RT_Bac_retron_I, RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons	NA|463aa|down_6|NZ_CP010973.1_616797_618186_-	NA	NA|108aa|down_7|NZ_CP010973.1_618208_618532_-	NA	NA|156aa|down_8|NZ_CP010973.1_618553_619021_-	NA	NA|234aa|down_9|NZ_CP010973.1_619683_620385_+	NA
GCF_000954175.1_ASM95417v1	NZ_CP010973	Burkholderia pseudomallei strain vgh07 isolate human chromosome 1, complete sequence	2	1392760-1392901	1	CRISPRCasFinder	no		RT,DEDDh,DinG,csa3,cas3,WYL	Orphan	CGCGTATGCGGCGAACGCCGGCGCGACAAGCGTTGCAGCGCGGCGG	46	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,DinG,csa3,cas3,WYL	NA|40aa|up_9|NZ_CP010973.1_1375370_1375490_+,NA|60aa|up_8|NZ_CP010973.1_1375486_1375666_+,NA|64aa|up_6|NZ_CP010973.1_1377168_1377360_-,NA|75aa|down_1|NZ_CP010973.1_1394305_1394530_-	NA|40aa|up_9|NZ_CP010973.1_1375370_1375490_+	NA	NA|60aa|up_8|NZ_CP010973.1_1375486_1375666_+	NA	NA|455aa|up_7|NZ_CP010973.1_1375807_1377172_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|64aa|up_6|NZ_CP010973.1_1377168_1377360_-	NA	NA|759aa|up_5|NZ_CP010973.1_1377356_1379633_-	pfam12805, FUSC-like, FUSC-like inner membrane protein yccS	NA|1115aa|up_4|NZ_CP010973.1_1380215_1383560_+	pfam04257, Exonuc_V_gamma, Exodeoxyribonuclease V, gamma subunit	NA|1271aa|up_3|NZ_CP010973.1_1383556_1387369_+	PRK10876, recB, exonuclease V subunit beta; Provisional	NA|899aa|up_2|NZ_CP010973.1_1387365_1390062_+	PRK10875, recD, exodeoxyribonuclease V subunit alpha	NA|135aa|up_1|NZ_CP010973.1_1390058_1390463_+	PRK09256, PRK09256, aminoacyl-tRNA hydrolase	NA|428aa|up_0|NZ_CP010973.1_1390876_1392160_-	cd01948, EAL, EAL domain	NA|311aa|down_0|NZ_CP010973.1_1393123_1394056_-	pfam00892, EamA, EamA-like transporter family	NA|75aa|down_1|NZ_CP010973.1_1394305_1394530_-	NA	NA|71aa|down_2|NZ_CP010973.1_1394781_1394994_-	PRK10540, PRK10540, osmotically-inducible lipoprotein OsmB	NA|644aa|down_3|NZ_CP010973.1_1395217_1397149_-	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|102aa|down_4|NZ_CP010973.1_1397788_1398094_+	TIGR02953, conserved_hypothetical_protein, pentapeptide MXKDX repeat protein	NA|275aa|down_5|NZ_CP010973.1_1398254_1399079_+	pfam06764, DUF1223, Protein of unknown function (DUF1223)	NA|379aa|down_6|NZ_CP010973.1_1399069_1400206_+	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion]	NA|264aa|down_7|NZ_CP010973.1_1400221_1401013_+	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains	NA|312aa|down_8|NZ_CP010973.1_1401445_1402381_+	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional	NA|399aa|down_9|NZ_CP010973.1_1402756_1403953_-	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily
GCF_000954175.1_ASM95417v1	NZ_CP010974	Burkholderia pseudomallei strain vgh07 isolate human chromosome 2, complete sequence	1	106032-106096	1	CRISPRCasFinder	no		cas3,DinG,csa3	Orphan	GGGCAGGATGCCACCGCGTCGGG	23	1	4	106055-106073|106055-106073|106055-106073|106055-106073	NZ_CP010974.1_105467-105485|NZ_CP010974.1_105551-105569|NZ_CP010974.1_105089-105107|NZ_CP010974.1_105887-105905	NA	1	1	Orphan	RT,DEDDh,DinG,csa3,cas3,WYL	NA|231aa|up_5|NZ_CP010974.1_97072_97765_+,NA|193aa|up_2|NZ_CP010974.1_100971_101550_+,NA|486aa|up_1|NZ_CP010974.1_101824_103282_-,NA|120aa|up_0|NZ_CP010974.1_103626_103986_-,NA|72aa|down_1|NZ_CP010974.1_108361_108577_+	NA|553aa|up_9|NZ_CP010974.1_93489_95148_+	pfam11394, DUF2875, Protein of unknown function (DUF2875)	NA|88aa|up_8|NZ_CP010974.1_95157_95421_+	cd14744, PAAR_CT_2, proline-alanine-alanine-arginine (PAAR) domain with uncharacterized C-terminal extension	NA|140aa|up_7|NZ_CP010974.1_95835_96255_-	COG0432, COG0432, Uncharacterized conserved protein [Function unknown]	NA|109aa|up_6|NZ_CP010974.1_96274_96601_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|231aa|up_5|NZ_CP010974.1_97072_97765_+	NA	NA|244aa|up_4|NZ_CP010974.1_98350_99082_-	pfam10003, DUF2244, Integral membrane protein (DUF2244)	NA|532aa|up_3|NZ_CP010974.1_99078_100674_-	cd01663, Cyt_c_Oxidase_I, Cytochrome C oxidase subunit I	NA|193aa|up_2|NZ_CP010974.1_100971_101550_+	NA	NA|486aa|up_1|NZ_CP010974.1_101824_103282_-	NA	NA|120aa|up_0|NZ_CP010974.1_103626_103986_-	NA	NA|484aa|down_0|NZ_CP010974.1_106838_108290_-	COG4287, PqaA, PhoPQ-activated pathogenicity-related protein [General function prediction only]	NA|72aa|down_1|NZ_CP010974.1_108361_108577_+	NA	NA|185aa|down_2|NZ_CP010974.1_108587_109142_-	pfam07437, YfaZ, YfaZ precursor	NA|182aa|down_3|NZ_CP010974.1_109726_110272_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|241aa|down_4|NZ_CP010974.1_110351_111074_+	PRK09926, PRK09926, fimbrial chaperone	NA|915aa|down_5|NZ_CP010974.1_111186_113931_+	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|191aa|down_6|NZ_CP010974.1_113923_114496_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|230aa|down_7|NZ_CP010974.1_114527_115217_+	pfam09850, DotU, Type VI secretion system protein DotU	NA|559aa|down_8|NZ_CP010974.1_115219_116896_+	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|180aa|down_9|NZ_CP010974.1_117249_117789_+	COG3516, COG3516, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]
GCF_000954175.1_ASM95417v1	NZ_CP010974	Burkholderia pseudomallei strain vgh07 isolate human chromosome 2, complete sequence	2	1314024-1314188	1	PILER-CR	no		cas3,DinG,csa3	Orphan	GCGAGCGCGGCGAGCGCGGCCGCG	24	0	0	NA	NA	NA	2	2	Orphan	RT,DEDDh,DinG,csa3,cas3,WYL	NA|76aa|up_4|NZ_CP010974.1_1307735_1307963_+,NA|166aa|down_2|NZ_CP010974.1_1317700_1318198_+,NA|84aa|down_4|NZ_CP010974.1_1319370_1319622_-,NA|83aa|down_7|NZ_CP010974.1_1323130_1323379_-	NA|332aa|up_9|NZ_CP010974.1_1303070_1304066_-	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|174aa|up_8|NZ_CP010974.1_1304953_1305475_+	PRK12511, PRK12511, RNA polymerase sigma factor; Provisional	NA|275aa|up_7|NZ_CP010974.1_1305471_1306296_+	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription]	NA|329aa|up_6|NZ_CP010974.1_1306353_1307340_+	pfam04264, YceI, YceI-like domain	NA|120aa|up_5|NZ_CP010974.1_1307379_1307739_+	COG4315, COG4315, Uncharacterized protein conserved in bacteria [Function unknown]	NA|76aa|up_4|NZ_CP010974.1_1307735_1307963_+	NA	NA|170aa|up_3|NZ_CP010974.1_1308236_1308746_+	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional	NA|335aa|up_2|NZ_CP010974.1_1308742_1309747_+	PRK09774, PRK09774, fec operon regulator FecR; Reviewed	NA|892aa|up_1|NZ_CP010974.1_1309873_1312549_+	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|327aa|up_0|NZ_CP010974.1_1312767_1313748_-	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins	NA|603aa|down_0|NZ_CP010974.1_1314822_1316631_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|337aa|down_1|NZ_CP010974.1_1316627_1317638_-	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily	NA|166aa|down_2|NZ_CP010974.1_1317700_1318198_+	NA	NA|231aa|down_3|NZ_CP010974.1_1318356_1319049_+	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|84aa|down_4|NZ_CP010974.1_1319370_1319622_-	NA	NA|420aa|down_5|NZ_CP010974.1_1319784_1321044_-	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C	NA|490aa|down_6|NZ_CP010974.1_1321263_1322733_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|83aa|down_7|NZ_CP010974.1_1323130_1323379_-	NA	NA|91aa|down_8|NZ_CP010974.1_1324032_1324305_+	pfam13663, DUF4148, Domain of unknown function (DUF4148)	NA|465aa|down_9|NZ_CP010974.1_1324399_1325794_-	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase
GCF_000954175.1_ASM95417v1	NZ_CP010974	Burkholderia pseudomallei strain vgh07 isolate human chromosome 2, complete sequence	3	2510935-2511027	2	CRISPRCasFinder	no		cas3,DinG,csa3	Orphan	GCGCGTCGGCGCGCGCGGCGGCGA	24	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,DinG,csa3,cas3,WYL	NA|170aa|up_4|NZ_CP010974.1_2505250_2505760_+,NA|168aa|up_3|NZ_CP010974.1_2505817_2506321_-,NA|86aa|down_6|NZ_CP010974.1_2515016_2515274_+	NA|358aa|up_9|NZ_CP010974.1_2495394_2496468_+	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional	NA|1079aa|up_8|NZ_CP010974.1_2496464_2499701_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|375aa|up_7|NZ_CP010974.1_2499703_2500828_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|612aa|up_6|NZ_CP010974.1_2500977_2502813_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|522aa|up_5|NZ_CP010974.1_2503144_2504710_-	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|170aa|up_4|NZ_CP010974.1_2505250_2505760_+	NA	NA|168aa|up_3|NZ_CP010974.1_2505817_2506321_-	NA	NA|342aa|up_2|NZ_CP010974.1_2506397_2507423_-	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)	NA|283aa|up_1|NZ_CP010974.1_2507653_2508502_-	pfam00231, ATP-synt, ATP synthase	NA|667aa|up_0|NZ_CP010974.1_2508498_2510499_-	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional	NA|83aa|down_0|NZ_CP010974.1_2511245_2511494_-	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional	NA|234aa|down_1|NZ_CP010974.1_2511490_2512192_-	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional	NA|103aa|down_2|NZ_CP010974.1_2512188_2512497_-	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2	NA|164aa|down_3|NZ_CP010974.1_2512489_2512981_-	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter	NA|152aa|down_4|NZ_CP010974.1_2512977_2513433_-	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional	NA|541aa|down_5|NZ_CP010974.1_2513422_2515045_-	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional	NA|86aa|down_6|NZ_CP010974.1_2515016_2515274_+	NA	NA|598aa|down_7|NZ_CP010974.1_2515405_2517199_+	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I	NA|468aa|down_8|NZ_CP010974.1_2517209_2518613_+	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated	NA|393aa|down_9|NZ_CP010974.1_2518609_2519788_+	PRK07058, PRK07058, acetate/propionate family kinase
GCF_000954175.1_ASM95417v1	NZ_CP010974	Burkholderia pseudomallei strain vgh07 isolate human chromosome 2, complete sequence	4	2931320-2931405	3	CRISPRCasFinder	no		cas3,DinG,csa3	Orphan	CGGAATGCCCGATCATCGGGATGC	24	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,DinG,csa3,cas3,WYL	NA|197aa|up_3|NZ_CP010974.1_2925003_2925594_+,NA|115aa|down_5|NZ_CP010974.1_2940746_2941091_-	NA|484aa|up_9|NZ_CP010974.1_2916909_2918361_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|348aa|up_8|NZ_CP010974.1_2918362_2919406_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|411aa|up_7|NZ_CP010974.1_2919411_2920644_-	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	NA|147aa|up_6|NZ_CP010974.1_2921897_2922338_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|372aa|up_5|NZ_CP010974.1_2922639_2923755_-	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|312aa|up_4|NZ_CP010974.1_2924052_2924988_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|197aa|up_3|NZ_CP010974.1_2925003_2925594_+	NA	NA|633aa|up_2|NZ_CP010974.1_2925653_2927552_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|758aa|up_1|NZ_CP010974.1_2927835_2930109_-	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|132aa|up_0|NZ_CP010974.1_2930241_2930637_-	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms]	NA|424aa|down_0|NZ_CP010974.1_2931982_2933254_+	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular	NA|614aa|down_1|NZ_CP010974.1_2933468_2935310_+	PRK06948, PRK06948, ribonucleotide reductase-like protein; Provisional	NA|604aa|down_2|NZ_CP010974.1_2935384_2937196_+	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown]	NA|344aa|down_3|NZ_CP010974.1_2937757_2938789_+	PRK07877, PRK07877, Rv1355c family protein	NA|611aa|down_4|NZ_CP010974.1_2938785_2940618_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|115aa|down_5|NZ_CP010974.1_2940746_2941091_-	NA	NA|150aa|down_6|NZ_CP010974.1_2941094_2941544_-	cd17775, CBS_pair_bact_arch, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains  present in bacteria and archaea	NA|218aa|down_7|NZ_CP010974.1_2941997_2942651_+	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC	NA|145aa|down_8|NZ_CP010974.1_2942718_2943153_-	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|377aa|down_9|NZ_CP010974.1_2943558_2944689_-	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane
