assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000963575.1_ASM96357v1	NZ_CP011077	Klebsiella michiganensis strain RC10 chromosome, complete genome	1	881603-881690	1	CRISPRCasFinder	no		cas3,DEDDh,RT,WYL,csa3,DinG	Orphan	GAAAGTAAGGCAGACAAAGAAGATCC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,RT,WYL,csa3,DinG	NA,NA|175aa|down_7|NZ_CP011077.1_890458_890983_+	NA|528aa|up_9|NZ_CP011077.1_869147_870731_-	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|280aa|up_8|NZ_CP011077.1_870853_871693_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|414aa|up_7|NZ_CP011077.1_871879_873121_+	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]	NA|419aa|up_6|NZ_CP011077.1_873120_874377_+	PRK09290, PRK09290, allantoate amidohydrolase; Reviewed	NA|256aa|up_5|NZ_CP011077.1_874538_875306_-	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional	NA|815aa|up_4|NZ_CP011077.1_875402_877847_-	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed	NA|194aa|up_3|NZ_CP011077.1_878076_878658_+	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase	NA|256aa|up_2|NZ_CP011077.1_878714_879482_+	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|247aa|up_1|NZ_CP011077.1_879452_880193_-	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|352aa|up_0|NZ_CP011077.1_880486_881542_+	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|486aa|down_0|NZ_CP011077.1_881730_883188_-	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|153aa|down_1|NZ_CP011077.1_883443_883902_+	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|416aa|down_2|NZ_CP011077.1_884175_885423_+	PRK05077, frsA, esterase FrsA	NA|134aa|down_3|NZ_CP011077.1_885480_885882_+	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|370aa|down_4|NZ_CP011077.1_885937_887047_-	PRK10159, PRK10159, phosphoporin PhoE	NA|368aa|down_5|NZ_CP011077.1_887345_888449_+	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|418aa|down_6|NZ_CP011077.1_888460_889714_+	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|175aa|down_7|NZ_CP011077.1_890458_890983_+	NA	NA|331aa|down_8|NZ_CP011077.1_892258_893251_+	pfam13391, HNH_2, HNH endonuclease	NA|159aa|down_9|NZ_CP011077.1_894594_895071_+	TIGR04366, hypothetical_protein, cupin fold metalloprotein, WbuC family
GCF_000963575.1_ASM96357v1	NZ_CP011077	Klebsiella michiganensis strain RC10 chromosome, complete genome	2	1940709-1940845	2	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,RT,WYL,csa3,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,RT,WYL,csa3,DinG	NA|47aa|up_0|NZ_CP011077.1_1940339_1940480_-,NA|30aa|down_7|NZ_CP011077.1_1950107_1950197_+	NA|407aa|up_9|NZ_CP011077.1_1931336_1932557_+	PRK09295, PRK09295, cysteine desulfurase SufS	NA|139aa|up_8|NZ_CP011077.1_1932568_1932985_+	PRK09296, PRK09296, cysteine desulfuration protein SufE	NA|333aa|up_7|NZ_CP011077.1_1933094_1934093_+	PRK10190, PRK10190, L,D-transpeptidase; Provisional	NA|79aa|up_6|NZ_CP011077.1_1934159_1934396_-	PRK15396, PRK15396, major outer membrane lipoprotein	NA|471aa|up_5|NZ_CP011077.1_1934705_1936118_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|370aa|up_4|NZ_CP011077.1_1936782_1937892_+	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]	NA|308aa|up_3|NZ_CP011077.1_1937919_1938843_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|311aa|up_2|NZ_CP011077.1_1938915_1939848_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|133aa|up_1|NZ_CP011077.1_1939905_1940304_+	cd02198, YjgH_like, YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|47aa|up_0|NZ_CP011077.1_1940339_1940480_-	NA	NA|458aa|down_0|NZ_CP011077.1_1941006_1942380_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|215aa|down_1|NZ_CP011077.1_1942616_1943261_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|464aa|down_2|NZ_CP011077.1_1943472_1944864_-	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|383aa|down_3|NZ_CP011077.1_1945091_1946240_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|401aa|down_4|NZ_CP011077.1_1946537_1947740_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|313aa|down_5|NZ_CP011077.1_1947854_1948793_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP011077.1_1948789_1949815_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP011077.1_1950107_1950197_+	NA	NA|194aa|down_8|NZ_CP011077.1_1950287_1950869_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|282aa|down_9|NZ_CP011077.1_1951202_1952048_-	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]
GCF_000963575.1_ASM96357v1	NZ_CP011077	Klebsiella michiganensis strain RC10 chromosome, complete genome	3	2036074-2036156	3	CRISPRCasFinder	no		cas3,DEDDh,RT,WYL,csa3,DinG	Orphan	AATTCCATCTCCCCTCAGGGGAG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,RT,WYL,csa3,DinG	NA,NA	NA|448aa|up_9|NZ_CP011077.1_2024922_2026266_+	cd16348, VOC_YdcJ_like, uncharacterized metal-dependent enzyme similar to Shigella flexneri YdcJ	NA|501aa|up_8|NZ_CP011077.1_2026307_2027810_+	COG2272, PnbA, Carboxylesterase type B [Lipid metabolism]	NA|285aa|up_7|NZ_CP011077.1_2027796_2028651_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|390aa|up_6|NZ_CP011077.1_2028769_2029939_+	PRK12414, PRK12414, putative aminotransferase; Provisional	NA|259aa|up_5|NZ_CP011077.1_2029951_2030728_+	cd13703, PBP2_HisJ_LAO, Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold	NA|552aa|up_4|NZ_CP011077.1_2030982_2032638_+	COG3131, MdoG, Periplasmic glucans biosynthesis protein [Inorganic ion transport and metabolism]	NA|185aa|up_3|NZ_CP011077.1_2032833_2033388_+	PRK10151, PRK10151, 50S ribosomal protein L7/L12-serine acetyltransferase	NA|309aa|up_2|NZ_CP011077.1_2033384_2034311_-	cd00208, LbetaH, Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X)	NA|331aa|up_1|NZ_CP011077.1_2034424_2035417_+	PRK10764, PRK10764, potassium-tellurite ethidium and proflavin transporter; Provisional	NA|198aa|up_0|NZ_CP011077.1_2035413_2036007_+	PRK11207, PRK11207, tellurite resistance methyltransferase TehB	NA|410aa|down_0|NZ_CP011077.1_2036177_2037407_-	PRK13381, PRK13381, peptidase T; Provisional	NA|532aa|down_1|NZ_CP011077.1_2037526_2039122_+	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|456aa|down_2|NZ_CP011077.1_2039239_2040607_-	TIGR00359, NN'-diacetylchitobiose_permease_IIC_component, phosphotransferase system, cellobiose specific, IIC component	NA|434aa|down_3|NZ_CP011077.1_2040699_2042001_-	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase	NA|102aa|down_4|NZ_CP011077.1_2042017_2042323_-	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|372aa|down_5|NZ_CP011077.1_2042572_2043688_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|223aa|down_6|NZ_CP011077.1_2043776_2044445_+	pfam11769, DUF3313, Protein of unknown function (DUF3313)	NA|300aa|down_7|NZ_CP011077.1_2044495_2045395_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|291aa|down_8|NZ_CP011077.1_2045567_2046440_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|403aa|down_9|NZ_CP011077.1_2046419_2047628_-	TIGR00843, Benzoate_membrane_transport_protein, benzoate transporter
GCF_000963575.1_ASM96357v1	NZ_CP011077	Klebsiella michiganensis strain RC10 chromosome, complete genome	4	3250015-3250093	4	CRISPRCasFinder	no		cas3,DEDDh,RT,WYL,csa3,DinG	Orphan	GAGGGAGAGGGTGCAAAACAATCGAAC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,RT,WYL,csa3,DinG	NA|95aa|up_4|NZ_CP011077.1_3244957_3245242_+,NA	NA|139aa|up_9|NZ_CP011077.1_3239833_3240250_-	pfam03928, Haem_degrading, Haem-degrading	NA|408aa|up_8|NZ_CP011077.1_3240260_3241484_-	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|334aa|up_7|NZ_CP011077.1_3241551_3242553_-	cd19148, AKR_AKR11B1, Bacillus subtilis aldo-keto reductase YhdN and similar proteins	NA|304aa|up_6|NZ_CP011077.1_3242642_3243554_+	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|337aa|up_5|NZ_CP011077.1_3243721_3244732_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|95aa|up_4|NZ_CP011077.1_3244957_3245242_+	NA	NA|158aa|up_3|NZ_CP011077.1_3245293_3245767_-	COG4807, COG4807, Uncharacterized protein conserved in bacteria [Function unknown]	NA|142aa|up_2|NZ_CP011077.1_3245935_3246361_+	PRK10562, PRK10562, putative acetyltransferase; Provisional	NA|371aa|up_1|NZ_CP011077.1_3246471_3247584_-	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC	NA|679aa|up_0|NZ_CP011077.1_3247746_3249783_+	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|411aa|down_0|NZ_CP011077.1_3250199_3251432_-	PRK15402, PRK15402, MdfA family multidrug efflux MFS transporter	NA|241aa|down_1|NZ_CP011077.1_3251625_3252348_+	COG3907, COG3907, PAP2 (acid phosphatase) superfamily protein [General function prediction only]	NA|203aa|down_2|NZ_CP011077.1_3252344_3252953_+	PRK11837, PRK11837, undecaprenyl pyrophosphate phosphatase; Provisional	NA|255aa|down_3|NZ_CP011077.1_3253046_3253811_+	PRK10681, PRK10681, DNA-binding transcriptional repressor DeoR; Provisional	NA|397aa|down_4|NZ_CP011077.1_3253815_3255006_-	PRK10001, PRK10001, serine-type D-Ala-D-Ala carboxypeptidase	NA|209aa|down_5|NZ_CP011077.1_3255269_3255896_+	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|374aa|down_6|NZ_CP011077.1_3255897_3257019_-	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase	NA|128aa|down_7|NZ_CP011077.1_3257130_3257514_-	PRK12302, bssR, biofilm formation regulator BssR	NA|442aa|down_8|NZ_CP011077.1_3257758_3259084_+	PRK14862, rimO, 30S ribosomal protein S12 methylthiotransferase RimO	NA|247aa|down_9|NZ_CP011077.1_3259765_3260506_-	pfam06629, MipA, MltA-interacting protein MipA
