bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164302|33|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	801230	801198	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	801198-801230	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	2
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164302|33|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	801289	801257	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	801257-801289	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	2
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164302|33|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	1415671	1415639	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1415639-1415671	ATTGGGAATACAATTTCTCTTTGTTGGGGTCCA	2
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795664|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	100.00	31	0	0	1	31	287504	287474	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	9e-09	50.7	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	287474-287504	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	0
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795664|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	287449	287419	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	8e-08	47.5	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	287419-287449	GGTAATGCAAGTTGGCGGGGCCCCAACACAG	1
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795664|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	1631603	1631633	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	8e-08	47.5	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	1631603-1631633	CTGTGTTGGGGCCCCGCCAACTTCCATTGCC	1
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	7.1|1597147|33|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.97	33	1	0	1	33	801198	801230	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	1e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	801198-801230	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	1
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	7.1|1597147|33|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.97	33	1	0	1	33	801257	801289	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	1e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	801257-801289	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	1
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808442	808472	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808442-808472	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808498	808528	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808498-808528	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808554	808584	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808554-808584	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	65765	65795	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	65765-65795	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	363289	363259	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	363259-363289	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	629379	629349	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	629349-629379	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	808609	808639	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808609-808639	CACATTATCGTAAGCTGACTTTCCGTCAGCT	2
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	852966	852996	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	852966-852996	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1121321	1121291	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1121291-1121321	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1327363	1327333	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1327333-1327363	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1415683	1415713	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1415683-1415713	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1611815	1611785	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1611785-1611815	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1929135	1929165	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1929135-1929165	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	2265653	2265683	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2265653-2265683	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020529	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276454|31|NC_020529|CRISPRCasFinder	NC_020529.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	2440970	2441000	164276-164360|403522-403623|754693-754775|795640-795718|852631-852712|1327342-1327431|1597121-1597205|2156065-2156145|2168386-2168471|2276429-2276509	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2440970-2441000	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
