bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164297|33|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	801224	801192	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	801192-801224	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	2
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164297|33|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	801283	801251	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	801251-801283	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	2
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164297|33|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	1415663	1415631	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1415631-1415663	ATTGGGAATACAATTTCTCTTTGTTGGGGTCCA	2
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795658|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	100.00	31	0	0	1	31	287499	287469	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	9e-09	50.7	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	287469-287499	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	0
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795658|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	287444	287414	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	8e-08	47.5	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	287414-287444	GGTAATGCAAGTTGGCGGGGCCCCAACACAG	1
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795658|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	1631592	1631622	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	8e-08	47.5	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	1631592-1631622	CTGTGTTGGGGCCCCGCCAACTTCCATTGCC	1
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	7.1|1597136|33|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.97	33	1	0	1	33	801192	801224	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	1e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	801192-801224	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	1
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	7.1|1597136|33|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.97	33	1	0	1	33	801251	801283	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	1e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	801251-801283	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	1
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808436	808466	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808436-808466	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808492	808522	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808492-808522	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808548	808578	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808548-808578	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	65761	65791	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	65761-65791	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	363284	363254	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	363254-363284	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	629373	629343	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	629343-629373	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	808603	808633	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808603-808633	CACATTATCGTAAGCTGACTTTCCGTCAGCT	2
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	852960	852990	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	852960-852990	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1121313	1121283	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1121283-1121313	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1327355	1327325	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1327325-1327355	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1415675	1415705	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1415675-1415705	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1611804	1611774	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1611774-1611804	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1929122	1929152	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1929122-1929152	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	2265638	2265668	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2265638-2265668	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020564	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276439|31|NC_020564|CRISPRCasFinder	NC_020564.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	2440955	2440985	164271-164355|403517-403618|754687-754769|795634-795712|852625-852706|1327334-1327423|1597110-1597194|2156052-2156132|2168373-2168458|2276414-2276494	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2440955-2440985	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
