The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010999	Streptococcus thermophilus strain MN-BM-A02 chromosome, complete genome	1850434	593225	606274	1850434		Streptococcus_phage(77.78%)	12	NA	NA
WP_004197422.1|593225_594227_+	catabolite control protein A	NA	C6ZCU4	Enterobacteria_phage	27.3	3.7e-21
WP_014608125.1|594285_594483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011680937.1|595365_596481_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	99.6	5.2e-157
WP_011680938.1|596527_596983_-	YueI family protein	NA	W6LLD2	Streptococcus_phage	98.0	2.2e-77
WP_011680939.1|597191_598496_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	99.5	1.4e-246
WP_011680940.1|598647_598833_-	hypothetical protein	NA	W6LMT3	Streptococcus_phage	96.7	3.0e-25
WP_002947233.1|598994_601181_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	99.2	0.0e+00
WP_046891875.1|601342_602506_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	99.0	8.5e-219
WP_002947238.1|602502_603180_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	100.0	1.9e-122
WP_011680943.1|603169_604027_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_011680944.1|604039_605107_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_011225712.1|605107_606274_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	34.9	1.6e-39
>prophage 2
NZ_CP010999	Streptococcus thermophilus strain MN-BM-A02 chromosome, complete genome	1850434	718356	727281	1850434		Bacillus_phage(50.0%)	8	NA	NA
WP_002948474.1|718356_718962_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	33.7	8.0e-19
WP_011227085.1|719056_720307_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	52.1	2.0e-96
WP_014608183.1|720313_721291_+	nucleoid-associated protein	NA	NA	NA	NA	NA
WP_014621429.1|721292_721904_+	lysozyme family protein	NA	A0A223LKM8	Bacillus_phage	41.0	4.6e-22
WP_011681019.1|721936_723676_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.2	2.6e-46
WP_011681020.1|723665_725414_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.9	7.1e-52
WP_002885174.1|725590_725722_+	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA	NA
WP_011681022.1|725730_727281_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9KZV5	Tupanvirus	29.3	2.0e-42
>prophage 3
NZ_CP010999	Streptococcus thermophilus strain MN-BM-A02 chromosome, complete genome	1850434	731643	804849	1850434	tRNA,transposase,integrase,bacteriocin	Streptococcus_phage(41.67%)	62	736306:736323	744101:744118
WP_014621434.1|731643_734280_-	calcium-translocating P-type ATPase, PMCA-type	NA	M1HK51	Paramecium_bursaria_Chlorella_virus	29.2	2.8e-84
WP_014608193.1|734456_736175_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	36.2	2.1e-27
736306:736323	attL	GATTTTAGAGGGAAATAT	NA	NA	NA	NA
WP_014727422.1|736594_736756_-	hypothetical protein	NA	A3F673	Streptococcus_phage	45.0	2.0e-06
WP_014727423.1|737239_737515_-	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	45.2	7.8e-14
WP_024704073.1|737531_737717_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024704074.1|738014_739520_-	DNA primase	NA	Q9AZI5	Lactococcus_phage	35.7	2.2e-62
WP_024704075.1|739509_740370_-	hypothetical protein	NA	A0A1X9I6L2	Streptococcus_phage	62.5	3.1e-101
WP_011227098.1|740384_740657_-	MerR family transcriptional regulator	NA	A0A1X9I5U9	Streptococcus_phage	50.6	1.4e-18
WP_024704076.1|740899_741136_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024704077.1|741149_741344_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024704078.1|741347_741641_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014608200.1|741879_742077_-	helix-turn-helix transcriptional regulator	NA	A0A1X9I5U5	Streptococcus_phage	67.7	1.9e-17
WP_014608201.1|742239_742752_+	helix-turn-helix transcriptional regulator	NA	A0A286QPK5	Streptococcus_phage	52.8	4.0e-19
WP_011227104.1|742834_744001_+|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	69.3	1.9e-154
WP_002948199.1|744116_744452_+	hypothetical protein	NA	NA	NA	NA	NA
744101:744118	attR	GATTTTAGAGGGAAATAT	NA	NA	NA	NA
WP_002950451.1|744780_747030_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_014621437.1|747218_748094_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_024704080.1|748233_749952_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	83.0	2.9e-271
WP_011681047.1|750034_750607_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_014608202.1|750634_751180_-	phosphopantothenoylcysteine decarboxylase	NA	A0A1V0S7W6	Shearwaterpox_virus	35.6	4.4e-24
WP_002948206.1|751172_751856_-	phosphopantothenate--cysteine ligase	NA	NA	NA	NA	NA
WP_024704082.1|752049_753720_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
WP_014621440.1|754569_754869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014621441.1|754946_755270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014621442.1|755292_755454_+	histidine kinase	NA	NA	NA	NA	NA
WP_014621443.1|755473_755989_+	sensor histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	29.8	1.1e-05
WP_087009847.1|756089_757659_+|transposase	IS3-like element ISSth1b family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.9	2.0e-53
WP_014621445.1|757850_759062_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	73.4	1.0e-166
WP_011681050.1|759420_760491_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011681051.1|760608_762147_+	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA	NA
WP_024704321.1|762971_767828_+	S8 family serine peptidase	NA	A0A217EQY2	Bacillus_phage	27.7	4.3e-06
WP_014621725.1|769649_770954_+|transposase	ISL3-like element ISSth1 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	71.0	1.3e-167
WP_002947597.1|771053_771290_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_002950487.1|771358_772279_-	type I pantothenate kinase	NA	A0A1B1ISL9	uncultured_Mediterranean_phage	36.6	3.8e-36
WP_002950490.1|772601_773192_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002950496.1|775143_775542_+	cytidine deaminase	NA	NA	NA	NA	NA
WP_002950498.1|775604_776675_+	BMP family ABC transporter substrate-binding protein	NA	A0A0A7DN02	Lactobacillus_phage	38.1	6.7e-53
WP_024704315.1|776788_778327_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.4	1.5e-16
WP_002950506.1|778319_779387_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011681056.1|779388_780345_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011681057.1|780448_781084_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	60.5	4.5e-73
WP_014608206.1|781178_783665_+	bifunctional DnaQ family exonuclease/ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	47.6	1.5e-212
WP_011681058.1|783809_784292_+	DUF5590 domain-containg protein	NA	NA	NA	NA	NA
WP_004197254.1|784296_785478_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_011681059.1|785514_786861_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	31.8	1.9e-57
WP_002950526.1|788376_788757_+	RidA family protein	NA	NA	NA	NA	NA
WP_024704316.1|788931_789585_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	55.9	9.7e-63
WP_014608213.1|789584_790028_+	6-carboxytetrahydropterin synthase QueD	NA	J9PV91	Bacillus_phage	56.3	3.5e-40
WP_014608214.1|790020_790737_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	46.9	3.4e-61
WP_014608215.1|790856_791348_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	56.7	1.8e-45
WP_014608216.1|792168_792357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014621466.1|792561_793332_+	DUF1003 domain-containing protein	NA	NA	NA	NA	NA
WP_011225838.1|793312_794203_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	28.9	3.3e-05
WP_014621467.1|794199_795174_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	73.8	4.0e-137
WP_002945081.1|795170_796082_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	64.7	7.1e-104
WP_081005008.1|797079_797304_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002944716.1|797392_797593_+	cold shock domain-containing protein	NA	A0A1X9IGI9	Lactococcus_phage	53.1	1.1e-12
WP_014621469.1|797872_798073_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	90.9	3.4e-27
WP_106693466.1|798331_799902_-|transposase	IS3-like element ISSth1b family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.9	2.0e-53
WP_038694590.1|800096_801272_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	28.0	4.8e-36
WP_024704322.1|801392_803483_-	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	32.7	2.3e-65
WP_046891876.1|803673_804849_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	28.0	7.0e-35
>prophage 4
NZ_CP010999	Streptococcus thermophilus strain MN-BM-A02 chromosome, complete genome	1850434	1056832	1111988	1850434	transposase,protease	Klosneuvirus(22.22%)	56	NA	NA
WP_014608400.1|1056832_1057552_-|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_014608401.1|1057671_1058454_-	esterase family protein	NA	NA	NA	NA	NA
WP_011681235.1|1058578_1060240_-	ribonuclease J	NA	NA	NA	NA	NA
WP_002946104.1|1060421_1061180_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	31.2	1.3e-13
WP_011681236.1|1061176_1062046_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_011681237.1|1062055_1063057_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_024704154.1|1063191_1063413_-	DUF4649 family protein	NA	NA	NA	NA	NA
WP_022096745.1|1063614_1063824_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014621725.1|1065997_1067302_+|transposase	ISL3-like element ISSth1 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	71.0	1.3e-167
WP_011681242.1|1067385_1068888_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_011681243.1|1068957_1069977_-	6-phosphofructokinase	NA	NA	NA	NA	NA
WP_011681244.1|1070069_1073180_-	DNA polymerase III subunit alpha	NA	A0A1C9LWZ5	Streptomyces_phage	28.5	3.8e-112
WP_024704250.1|1073332_1074118_-	translation factor Sua5	NA	NA	NA	NA	NA
WP_011226115.1|1074214_1074805_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_011681245.1|1074814_1076197_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_011681246.1|1076227_1076509_-	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
WP_011681247.1|1076513_1077551_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_011681248.1|1077563_1079126_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	31.2	1.1e-08
WP_011226119.1|1079473_1080166_-	phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_002950994.1|1080420_1081359_+	dihydroorotate oxidase	NA	A0A1V0SH91	Hokovirus	44.0	4.1e-62
WP_011681249.1|1081423_1081624_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002950996.1|1081682_1081958_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	69.7	4.9e-24
WP_011681250.1|1082094_1082664_-	YpmS family protein	NA	NA	NA	NA	NA
WP_014608413.1|1082656_1083532_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_011681251.1|1083524_1084361_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	38.0	2.6e-15
WP_002953185.1|1084431_1086102_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_014621702.1|1086110_1086557_-	ArgR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011226127.1|1086504_1087371_-	TlyA family RNA methyltransferase	NA	NA	NA	NA	NA
WP_024704251.1|1087363_1088236_-	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	24.2	2.0e-07
WP_002951008.1|1088235_1088451_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_011226129.1|1088428_1089769_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SIT1	Klosneuvirus	34.1	5.7e-41
WP_024704252.1|1089957_1090203_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681255.1|1090854_1091499_-	endonuclease III	NA	NA	NA	NA	NA
WP_002947201.1|1091498_1092197_-	DnaD domain-containing protein	NA	Q7Y4K5	Streptococcus_phage	40.0	2.8e-07
WP_011681256.1|1092268_1093213_-	homoserine O-succinyltransferase	NA	NA	NA	NA	NA
WP_002947203.1|1093383_1093902_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	47.6	7.8e-31
WP_011681257.1|1094016_1096227_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	30.4	1.0e-71
WP_011681258.1|1096239_1097007_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_011226135.1|1097006_1097936_-	ribonuclease Z	NA	NA	NA	NA	NA
WP_011681259.1|1097967_1098615_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_011681260.1|1098607_1099846_-	GTPase HflX	NA	NA	NA	NA	NA
WP_011681261.1|1100052_1101057_-|transposase	IS5-like element ISSth7 family transposase	transposase	NA	NA	NA	NA
WP_011681262.1|1101184_1102612_-	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA	NA
WP_011681263.1|1103104_1103419_-	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA	NA
WP_011681264.1|1103427_1103766_-	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA	NA
WP_011681265.1|1103762_1104521_-	imidazole glycerol phosphate synthase subunit HisF	NA	A0A1V0SIZ6	Klosneuvirus	22.7	5.2e-07
WP_011681266.1|1104522_1105242_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	A0A2H4UVM0	Bodo_saltans_virus	25.8	3.6e-10
WP_011681267.1|1105290_1105899_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
WP_011681268.1|1105895_1106480_-	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA	NA
WP_011681269.1|1106499_1107783_-	histidinol dehydrogenase	NA	NA	NA	NA	NA
WP_011681270.1|1107779_1108430_-	ATP phosphoribosyltransferase	NA	A0A1V0SIZ6	Klosneuvirus	22.8	9.2e-05
WP_011681271.1|1108422_1109403_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_011681272.1|1109399_1110452_-	histidinol-phosphate transaminase	NA	A0A1X7QHI1	Faustovirus	24.9	3.9e-21
WP_024704253.1|1111145_1111364_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	57.4	5.4e-10
WP_162487766.1|1111387_1111690_-|transposase	transposase family protein	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	53.8	4.0e-11
WP_024009948.1|1111649_1111988_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP010999	Streptococcus thermophilus strain MN-BM-A02 chromosome, complete genome	1850434	1255003	1318287	1850434	transposase,tRNA	Bacillus_phage(13.33%)	47	NA	NA
WP_037622988.1|1255003_1255816_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.5	9.0e-66
WP_162487767.1|1255833_1255995_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_024703933.1|1256887_1257520_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024703934.1|1257799_1260979_-	SMC family ATPase	NA	M4QHD2	Prochlorococcus_phage	24.1	1.4e-05
WP_014608518.1|1260975_1262184_-	exonuclease SbcCD subunit D	NA	D9J0R3	Brochothrix_phage	22.3	5.3e-06
WP_046891880.1|1263038_1266119_-	DUF4981 domain-containing protein	NA	L0N6M2	Herpes_simplex_virus	32.5	1.7e-144
WP_011681393.1|1266122_1268027_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_011226269.1|1268129_1269176_-	galactose-1-epimerase	NA	NA	NA	NA	NA
WP_011681394.1|1269245_1270247_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	37.0	8.0e-48
WP_014621782.1|1270276_1271758_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_024703935.1|1271777_1272944_-	galactokinase	NA	NA	NA	NA	NA
WP_011226273.1|1273085_1274081_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_087010049.1|1274560_1274650_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_014608522.1|1274662_1274854_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	50.0	1.3e-07
WP_004197624.1|1274875_1275064_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_002951370.1|1277206_1277488_+	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	31.7	7.2e-07
WP_014608527.1|1279083_1281348_+	bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB	NA	NA	NA	NA	NA
WP_024009995.1|1281936_1282770_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024009996.1|1282950_1283169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_128887977.1|1283218_1283911_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014608528.1|1284189_1286604_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	50.9	4.7e-86
WP_014608529.1|1286756_1287755_-	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	48.4	7.0e-28
WP_024703937.1|1287756_1288476_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_011226286.1|1288465_1288984_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_002951384.1|1289655_1290300_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011226288.1|1290289_1291300_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_011226289.1|1291296_1291995_-	cell wall-active antibiotics response protein	NA	NA	NA	NA	NA
WP_024703938.1|1293054_1294926_-	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	B5LWE2	Feldmannia_species_virus	29.9	1.4e-21
WP_002946881.1|1294925_1295663_-	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA	NA
WP_014608533.1|1295706_1297029_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_014608534.1|1297018_1297954_-|tRNA	methionyl-tRNA formyltransferase	tRNA	NA	NA	NA	NA
WP_024703939.1|1297971_1300368_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_002951415.1|1300509_1300824_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_014608537.1|1300845_1301475_-	guanylate kinase	NA	S4VT50	Pandoravirus	44.2	1.9e-10
WP_014608538.1|1301700_1303092_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_011226298.1|1303105_1303921_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_011681412.1|1303913_1304708_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_011681413.1|1304892_1305270_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023909821.1|1305274_1305973_+	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	26.2	8.1e-07
WP_002951425.1|1305984_1306770_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002951426.1|1306819_1307749_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	8.5e-20
WP_011226304.1|1307741_1308827_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.4	5.1e-16
WP_002946409.1|1308836_1309763_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011681416.1|1309762_1311256_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_024703940.1|1311317_1313285_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011681419.1|1314862_1316836_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_095559415.1|1317140_1318287_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	41.0	2.3e-46
>prophage 6
NZ_CP010999	Streptococcus thermophilus strain MN-BM-A02 chromosome, complete genome	1850434	1476967	1529489	1850434	tRNA,protease,bacteriocin,transposase	Bacillus_virus(23.08%)	56	NA	NA
WP_014608641.1|1476967_1478410_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_014608642.1|1478409_1479876_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_002884769.1|1479875_1480178_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_024010053.1|1480317_1480572_-	glycosyl transferase	NA	NA	NA	NA	NA
WP_080998437.1|1480584_1480794_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_024703984.1|1482703_1483213_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_024703985.1|1483224_1484073_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002946999.1|1484196_1484748_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	40.3	2.6e-24
WP_002951720.1|1484810_1485596_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_002951721.1|1485855_1487070_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002946987.1|1487424_1487877_+	universal stress protein	NA	NA	NA	NA	NA
WP_011681547.1|1488933_1489308_-	membrane protein	NA	NA	NA	NA	NA
WP_002946980.1|1489519_1490320_-	pyruvate formate lyase-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	31.8	2.9e-24
WP_157821721.1|1490507_1490636_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_024703987.1|1491315_1492647_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_024703988.1|1492760_1493543_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.0	7.7e-14
WP_011681548.1|1494164_1496231_-	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_011226461.1|1496239_1496482_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011226462.1|1496478_1497027_-	SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	44.1	3.5e-37
WP_011226463.1|1497023_1497968_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	48.3	8.6e-36
WP_014608650.1|1498052_1499090_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_011681550.1|1499106_1499604_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	28.8	1.1e-13
WP_081005005.1|1499637_1500186_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_011226467.1|1500327_1501248_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	52.0	4.7e-87
WP_014621911.1|1501313_1501538_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_014608652.1|1501752_1502496_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.5	1.2e-29
WP_011681552.1|1502495_1503419_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014608653.1|1503629_1504460_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002947030.1|1504919_1505153_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014608654.1|1505450_1506554_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_011226473.1|1506832_1509142_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	32.4	8.1e-112
WP_011681555.1|1509408_1510191_+	carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_014608655.1|1510241_1510694_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014621914.1|1511044_1511350_-	type I restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_011681558.1|1512327_1513083_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_024703990.1|1513079_1513730_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.0	3.7e-22
WP_024703991.1|1513932_1514889_-	serine hydrolase	NA	NA	NA	NA	NA
WP_011681560.1|1514888_1515644_-	peptidase	NA	NA	NA	NA	NA
WP_014608659.1|1515925_1516288_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002951781.1|1516374_1517238_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	34.4	3.9e-27
WP_011681561.1|1517358_1519626_+	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
WP_002951783.1|1519705_1520086_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002945924.1|1520210_1520474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004197070.1|1520795_1521092_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_011681562.1|1521256_1521463_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681563.1|1521493_1522183_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_106693466.1|1522376_1523946_+|transposase	IS3-like element ISSth1b family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.9	2.0e-53
WP_014608660.1|1524092_1524347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024703992.1|1524597_1524999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681567.1|1525592_1525808_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014608662.1|1526003_1526234_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011681569.1|1526589_1526790_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681570.1|1526808_1526985_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002948869.1|1527238_1527970_+	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	20.9	5.9e-08
WP_024703993.1|1527969_1529310_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_011681573.1|1529327_1529489_-|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	bacteriocin	NA	NA	NA	NA
>prophage 7
NZ_CP010999	Streptococcus thermophilus strain MN-BM-A02 chromosome, complete genome	1850434	1675208	1741408	1850434	integrase,tRNA,protease,transposase	Streptococcus_phage(28.57%)	60	1725709:1725723	1731006:1731020
WP_011681669.1|1675208_1675883_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_011681670.1|1675873_1676401_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_011681671.1|1676469_1677603_-	N-acetyldiaminopimelate deacetylase	NA	NA	NA	NA	NA
WP_002951996.1|1677681_1678380_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA	NA
WP_024704236.1|1679334_1680168_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_014608734.1|1680781_1681045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014608735.1|1681125_1681644_-	nucleoside deaminase	NA	NA	NA	NA	NA
WP_011226610.1|1682402_1682795_-	single-stranded DNA-binding protein	NA	A1EAD1	Streptococcus_phage	49.2	8.8e-27
WP_011226611.1|1683000_1683228_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_024704237.1|1683242_1684274_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_002952017.1|1684411_1685035_-|tRNA	DUF4479 and tRNA-binding domain-containing protein	tRNA	NA	NA	NA	NA
WP_011226613.1|1685044_1685359_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_011681678.1|1685355_1685640_-	DUF4651 domain-containing protein	NA	NA	NA	NA	NA
WP_002952022.1|1685739_1686807_+	glutamyl aminopeptidase	NA	NA	NA	NA	NA
WP_011226616.1|1686822_1687593_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	36.1	2.8e-32
WP_011681679.1|1687622_1688285_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011681680.1|1688381_1688825_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014608739.1|1688898_1689324_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011681681.1|1689280_1689556_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014608740.1|1690014_1691208_-	acetate kinase	NA	NA	NA	NA	NA
WP_011681684.1|1691263_1692220_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011681685.1|1692264_1692582_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681686.1|1692559_1692997_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_024704238.1|1692980_1693274_-	competence protein ComGE	NA	NA	NA	NA	NA
WP_011681687.1|1693245_1693608_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002946126.1|1693633_1693960_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_120764773.1|1693956_1695057_-	type II secretion system F family protein	NA	NA	NA	NA	NA
WP_022096896.1|1694938_1695880_-	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA	NA
WP_014622006.1|1695960_1696323_-	DUF1033 family protein	NA	NA	NA	NA	NA
WP_011681690.1|1696480_1700119_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	25.6	5.6e-67
WP_002947331.1|1700219_1703801_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	23.9	6.8e-49
WP_024704240.1|1704163_1706587_-	penicillin-binding protein	NA	NA	NA	NA	NA
WP_011681693.1|1706687_1707944_+|tRNA	tyrosine--tRNA ligase	tRNA	A0A1S6UA79	Serratia_phage	41.4	9.6e-75
WP_002952054.1|1708069_1709092_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_011226635.1|1709167_1709644_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_014622011.1|1709636_1711337_-	acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	33.3	2.6e-67
WP_024704241.1|1713361_1715029_-	DAK2 domain-containing protein	NA	NA	NA	NA	NA
WP_011681698.1|1715028_1715394_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_011681699.1|1715503_1716793_-	MATE family efflux transporter	NA	NA	NA	NA	NA
WP_014622015.1|1716850_1718335_-	threonine synthase	NA	NA	NA	NA	NA
WP_014622016.1|1718990_1719329_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_002952083.1|1719321_1719555_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_037623252.1|1719538_1719973_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_014608756.1|1719985_1720813_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_014608758.1|1721122_1721518_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_014608759.1|1721656_1723552_-	endopeptidase	NA	A0A1V0SHG2	Klosneuvirus	29.0	6.7e-72
1725709:1725723	attL	TTTAATAAAATAGTA	NA	NA	NA	NA
WP_002952104.1|1725933_1726092_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_100284920.1|1726095_1726644_+	UTRA domain-containing protein	NA	NA	NA	NA	NA
WP_011681702.1|1726699_1727260_-	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_002948269.1|1727272_1727611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002953561.1|1728034_1728160_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_024704243.1|1728351_1728807_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	33.8	3.9e-10
WP_024704245.1|1729170_1729692_-|integrase	tyrosine-type recombinase/integrase	integrase	D2XR58	Bacillus_phage	36.7	3.4e-18
WP_003331352.1|1729720_1730017_-	DUF4298 domain-containing protein	NA	NA	NA	NA	NA
WP_003726380.1|1730723_1731083_+	winged helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	48.2	5.4e-23
1731006:1731020	attR	TACTATTTTATTAAA	NA	NA	NA	NA
WP_001291323.1|1731079_1733197_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	62.7	3.1e-235
WP_024704246.1|1733562_1734789_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	27.3	5.2e-33
WP_024704247.1|1734778_1736374_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	49.6	2.4e-123
WP_099421058.1|1739461_1739713_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_038694463.1|1740232_1741408_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	28.0	4.8e-36
>prophage 8
NZ_CP010999	Streptococcus thermophilus strain MN-BM-A02 chromosome, complete genome	1850434	1828115	1836291	1850434		Staphylococcus_phage(16.67%)	9	NA	NA
WP_011681757.1|1828115_1828745_-	hypothetical protein	NA	Q4Z8Z7	Staphylococcus_phage	45.2	3.6e-22
WP_011226701.1|1828984_1829539_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0E3XCL7	Enterococcus_phage	42.2	3.1e-25
WP_002952279.1|1829842_1830637_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_002947774.1|1830629_1831472_-	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.2	2.1e-17
WP_002947776.1|1831447_1832278_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	31.3	4.5e-20
WP_024704275.1|1832290_1832833_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_011681760.1|1832845_1833703_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_024704276.1|1833761_1835039_-	insulinase family protein	NA	A0A167R9K4	Powai_lake_megavirus	28.1	1.3e-21
WP_024704277.1|1835040_1836291_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	39.9	5.0e-92
