assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001018685.2_ASM101868v2	NZ_CP026076	Staphylococcus aureus strain FDAARGOS_4 chromosome, complete genome	1	57995-58073	1	CRISPRCasFinder	no	DEDDh	DEDDh,csa3,WYL,cas3,DinG	Unclear	TGTTGGGGCCCCGCCAACCTGCA	23	1	6	58018-58050|58018-58050|58018-58050|58018-58050|58018-58050|58018-58050	NZ_CP026076.1_693111-693143|NZ_CP026076.1_1687676-1687708|NZ_CP026076.1_2011722-2011690|NZ_CP026076.1_2219873-2219841|NZ_CP026076.1_2534585-2534617|NZ_CP026076.1_2309118-2309150	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG	NA|92aa|up_6|NZ_CP026076.1_52189_52465_+,NA|129aa|up_1|NZ_CP026076.1_56450_56837_-,NA|138aa|down_1|NZ_CP026076.1_59815_60229_-,NA|37aa|down_2|NZ_CP026076.1_60257_60368_-,NA|31aa|down_6|NZ_CP026076.1_63373_63466_-	NA|419aa|up_9|NZ_CP026076.1_50112_51369_-	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29)	NA|67aa|up_8|NZ_CP026076.1_51371_51572_-	COG4840, COG4840, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_7|NZ_CP026076.1_51718_52183_+	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|92aa|up_6|NZ_CP026076.1_52189_52465_+	NA	NA|406aa|up_5|NZ_CP026076.1_52742_53960_+	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair]	NA|210aa|up_4|NZ_CP026076.1_54075_54705_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|348aa|up_3|NZ_CP026076.1_54694_55738_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|234aa|up_2|NZ_CP026076.1_55734_56436_-	COG4758, COG4758, Predicted membrane protein [Function unknown]	NA|129aa|up_1|NZ_CP026076.1_56450_56837_-	NA	NA|253aa|up_0|NZ_CP026076.1_57053_57812_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|329aa|down_0|NZ_CP026076.1_58339_59326_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|138aa|down_1|NZ_CP026076.1_59815_60229_-	NA	NA|37aa|down_2|NZ_CP026076.1_60257_60368_-	NA	NA|244aa|down_3|NZ_CP026076.1_60453_61185_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|438aa|down_4|NZ_CP026076.1_61186_62500_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|167aa|down_5|NZ_CP026076.1_62791_63292_+	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]	NA|31aa|down_6|NZ_CP026076.1_63373_63466_-	NA	DEDDh|185aa|down_7|NZ_CP026076.1_63680_64235_+	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|357aa|down_8|NZ_CP026076.1_64302_65373_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|177aa|down_9|NZ_CP026076.1_65619_66150_-	pfam11667, DUF3267, Putative zincin peptidase
GCF_001018685.2_ASM101868v2	NZ_CP026076	Staphylococcus aureus strain FDAARGOS_4 chromosome, complete genome	2	292846-292996	2	CRISPRCasFinder	no	csa3	DEDDh,csa3,WYL,cas3,DinG	Type I-A	AACTTTAGTTGTTAGGGGCTCTTATGCA	28	0	0	NA	NA	NA	2	2	Orphan	DEDDh,csa3,WYL,cas3,DinG	NA|77aa|up_5|NZ_CP026076.1_287717_287948_-,NA|364aa|up_0|NZ_CP026076.1_291736_292828_+,NA|35aa|down_0|NZ_CP026076.1_293327_293432_-,NA|31aa|down_2|NZ_CP026076.1_295543_295636_+	NA|237aa|up_9|NZ_CP026076.1_283327_284038_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NZ_CP026076.1_284158_284602_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NZ_CP026076.1_284801_285215_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NZ_CP026076.1_285672_287046_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NZ_CP026076.1_287717_287948_-	NA	NA|313aa|up_4|NZ_CP026076.1_287978_288917_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NZ_CP026076.1_289351_290017_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NZ_CP026076.1_290168_290489_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|NZ_CP026076.1_290490_291471_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NZ_CP026076.1_291736_292828_+	NA	NA|35aa|down_0|NZ_CP026076.1_293327_293432_-	NA	NA|379aa|down_1|NZ_CP026076.1_294118_295255_-	pfam02037, SAP, SAP domain	NA|31aa|down_2|NZ_CP026076.1_295543_295636_+	NA	NA|286aa|down_3|NZ_CP026076.1_296340_297198_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_4|NZ_CP026076.1_297265_298048_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_5|NZ_CP026076.1_298279_300085_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_6|NZ_CP026076.1_300765_302304_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_7|NZ_CP026076.1_302338_304471_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_8|NZ_CP026076.1_304482_304917_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_9|NZ_CP026076.1_304916_306023_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional
GCF_001018685.2_ASM101868v2	NZ_CP026076	Staphylococcus aureus strain FDAARGOS_4 chromosome, complete genome	3	416762-416955	1	CRT	no		DEDDh,csa3,WYL,cas3,DinG	Orphan	TGTTGGGGCCCCGCCAACTTGCA	23	3	14	416785-416817|416785-416817|416785-416817|416785-416817|416785-416817|416841-416876|416841-416876|416841-416876|416841-416876|416900-416932|416900-416932|416900-416932|416900-416932|416900-416932	NZ_CP026076.1_693111-693143|NZ_CP026076.1_1687676-1687708|NZ_CP026076.1_2011722-2011690|NZ_CP026076.1_2219873-2219841|NZ_CP026076.1_2309118-2309150|NZ_CP026076.1_2011669-2011634|NZ_CP026076.1_2713073-2713038|NZ_CP026076.1_68821-68856|NZ_CP026076.1_2534524-2534559|NZ_CP026076.1_693111-693143|NZ_CP026076.1_1687620-1687652|NZ_CP026076.1_1687676-1687708|NZ_CP026076.1_2011722-2011690|NZ_CP026076.1_2219873-2219841	NA	3	3	Orphan	DEDDh,csa3,WYL,cas3,DinG	NA|55aa|up_8|NZ_CP026076.1_407290_407455_+,NA|106aa|up_7|NZ_CP026076.1_407699_408017_+,NA|84aa|up_4|NZ_CP026076.1_413141_413393_+,NA|57aa|up_0|NZ_CP026076.1_416531_416702_+,NA	NA|303aa|up_9|NZ_CP026076.1_406249_407158_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|55aa|up_8|NZ_CP026076.1_407290_407455_+	NA	NA|106aa|up_7|NZ_CP026076.1_407699_408017_+	NA	NA|1056aa|up_6|NZ_CP026076.1_408203_411371_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_5|NZ_CP026076.1_411487_412753_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_4|NZ_CP026076.1_413141_413393_+	NA	NA|147aa|up_3|NZ_CP026076.1_414309_414750_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_2|NZ_CP026076.1_414742_415954_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_1|NZ_CP026076.1_416055_416406_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|57aa|up_0|NZ_CP026076.1_416531_416702_+	NA	NA|341aa|down_0|NZ_CP026076.1_417096_418119_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|NZ_CP026076.1_418138_418738_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|NZ_CP026076.1_418744_418978_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|NZ_CP026076.1_418983_419430_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|NZ_CP026076.1_419443_419929_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|NZ_CP026076.1_419925_421185_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|NZ_CP026076.1_421247_421742_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|NZ_CP026076.1_421743_422250_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|NZ_CP026076.1_422280_423285_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|NZ_CP026076.1_423454_424060_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
GCF_001018685.2_ASM101868v2	NZ_CP026076	Staphylococcus aureus strain FDAARGOS_4 chromosome, complete genome	4	1280737-1280837	3	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG	Orphan	TTATGAATTGAGTATTAAATTTG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG	NA|70aa|up_9|NZ_CP026076.1_1272309_1272519_-,NA|128aa|up_7|NZ_CP026076.1_1273343_1273727_-,NA|98aa|up_5|NZ_CP026076.1_1274680_1274974_-,NA|34aa|up_0|NZ_CP026076.1_1279961_1280063_+,NA|221aa|down_1|NZ_CP026076.1_1281927_1282590_-,NA|179aa|down_7|NZ_CP026076.1_1288681_1289218_-	NA|70aa|up_9|NZ_CP026076.1_1272309_1272519_-	NA	NA|194aa|up_8|NZ_CP026076.1_1272696_1273278_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|128aa|up_7|NZ_CP026076.1_1273343_1273727_-	NA	NA|209aa|up_6|NZ_CP026076.1_1273981_1274608_-	NF033193, lipo_NDxxF, NDxxF motif lipoprotein	NA|98aa|up_5|NZ_CP026076.1_1274680_1274974_-	NA	NA|508aa|up_4|NZ_CP026076.1_1275052_1276576_-	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|190aa|up_3|NZ_CP026076.1_1276591_1277161_-	TIGR03137, AhpC, peroxiredoxin	NA|252aa|up_2|NZ_CP026076.1_1277652_1278408_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|463aa|up_1|NZ_CP026076.1_1278488_1279877_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|34aa|up_0|NZ_CP026076.1_1279961_1280063_+	NA	NA|319aa|down_0|NZ_CP026076.1_1280853_1281810_-	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|221aa|down_1|NZ_CP026076.1_1281927_1282590_-	NA	NA|136aa|down_2|NZ_CP026076.1_1282732_1283140_-	pfam11181, YflT, Heat induced stress protein YflT	NA|193aa|down_3|NZ_CP026076.1_1283652_1284231_+	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|423aa|down_4|NZ_CP026076.1_1284230_1285499_+	TIGR03173, pbuX, xanthine permease	NA|489aa|down_5|NZ_CP026076.1_1285536_1287003_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|514aa|down_6|NZ_CP026076.1_1287027_1288569_+	PRK00074, guaA, GMP synthase; Reviewed	NA|179aa|down_7|NZ_CP026076.1_1288681_1289218_-	NA	NA|235aa|down_8|NZ_CP026076.1_1289610_1290315_-	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|91aa|down_9|NZ_CP026076.1_1290713_1290986_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_001018685.2_ASM101868v2	NZ_CP026076	Staphylococcus aureus strain FDAARGOS_4 chromosome, complete genome	5	1525013-1525105	4	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG	Orphan	CTAAAGGTGAAGAGGAACGCAGTTGGATGCTA	32	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG	NA|36aa|up_3|NZ_CP026076.1_1521497_1521605_+,NA|169aa|down_4|NZ_CP026076.1_1528852_1529359_+,NA|239aa|down_5|NZ_CP026076.1_1529520_1530237_+	NA|313aa|up_9|NZ_CP026076.1_1515699_1516638_+	cd19083, AKR_AKR11A1_11D1, AKR11A and  AKR11D families of aldo-keto reductase (AKR)	NA|179aa|up_8|NZ_CP026076.1_1516848_1517385_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|159aa|up_7|NZ_CP026076.1_1517553_1518030_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|432aa|up_6|NZ_CP026076.1_1518069_1519365_+	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|174aa|up_5|NZ_CP026076.1_1519392_1519914_+	pfam08741, YwhD, YwhD family	NA|337aa|up_4|NZ_CP026076.1_1520412_1521423_+	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional	NA|36aa|up_3|NZ_CP026076.1_1521497_1521605_+	NA	NA|128aa|up_2|NZ_CP026076.1_1521730_1522114_+	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown]	NA|554aa|up_1|NZ_CP026076.1_1522110_1523772_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|212aa|up_0|NZ_CP026076.1_1524159_1524795_+	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|276aa|down_0|NZ_CP026076.1_1525233_1526061_+	cd01143, YvrC, Periplasmic binding protein YvrC	NA|317aa|down_1|NZ_CP026076.1_1526208_1527159_+	pfam01032, FecCD, FecCD transport family	NA|240aa|down_2|NZ_CP026076.1_1527213_1527933_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|267aa|down_3|NZ_CP026076.1_1527916_1528717_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|169aa|down_4|NZ_CP026076.1_1528852_1529359_+	NA	NA|239aa|down_5|NZ_CP026076.1_1529520_1530237_+	NA	NA|263aa|down_6|NZ_CP026076.1_1530405_1531194_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|125aa|down_7|NZ_CP026076.1_1531444_1531819_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|310aa|down_8|NZ_CP026076.1_1532766_1533696_-	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown]	NA|75aa|down_9|NZ_CP026076.1_1533890_1534115_-	pfam11148, DUF2922, Protein of unknown function (DUF2922)
GCF_001018685.2_ASM101868v2	NZ_CP026076	Staphylococcus aureus strain FDAARGOS_4 chromosome, complete genome	6	1730939-1731020	5	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG	Orphan	CCCCAACTTGCATTGTCTGTAGAA	24	1	2	1730963-1730996|1730963-1730996	NZ_CP026076.1_2219919-2219886|NZ_CP026076.1_2309072-2309105	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG	NA|38aa|up_1|NZ_CP026076.1_1729841_1729955_+,NA	NA|206aa|up_9|NZ_CP026076.1_1724696_1725314_-	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|165aa|up_8|NZ_CP026076.1_1725468_1725963_-	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|141aa|up_7|NZ_CP026076.1_1726361_1726784_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|239aa|up_6|NZ_CP026076.1_1726931_1727648_+	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|180aa|up_5|NZ_CP026076.1_1727730_1728270_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_4|NZ_CP026076.1_1728419_1728740_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_3|NZ_CP026076.1_1728883_1729240_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_2|NZ_CP026076.1_1729397_1729778_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|38aa|up_1|NZ_CP026076.1_1729841_1729955_+	NA	NA|293aa|up_0|NZ_CP026076.1_1729956_1730835_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|129aa|down_0|NZ_CP026076.1_1731576_1731963_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|down_1|NZ_CP026076.1_1731955_1732252_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|down_2|NZ_CP026076.1_1732501_1733527_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|down_3|NZ_CP026076.1_1733519_1734215_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|down_4|NZ_CP026076.1_1734232_1735054_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|407aa|down_5|NZ_CP026076.1_1735196_1736417_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|243aa|down_6|NZ_CP026076.1_1736504_1737233_-	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain	NA|243aa|down_7|NZ_CP026076.1_1737256_1737985_-	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain	NA|153aa|down_8|NZ_CP026076.1_1738001_1738460_-	pfam06114, Peptidase_M78, IrrE N-terminal-like domain	NA|111aa|down_9|NZ_CP026076.1_1738471_1738804_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCF_001018685.2_ASM101868v2	NZ_CP026076	Staphylococcus aureus strain FDAARGOS_4 chromosome, complete genome	7	1927359-1927446	6	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,DinG	Orphan	CCCCTAACAACTAAAAGTTGTAAGG	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,DinG	NA|40aa|up_0|NZ_CP026076.1_1927235_1927355_+,NA|45aa|down_0|NZ_CP026076.1_1927455_1927590_-,NA|432aa|down_1|NZ_CP026076.1_1927741_1929037_+	NA|730aa|up_9|NZ_CP026076.1_1915813_1918003_+	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|495aa|up_8|NZ_CP026076.1_1917981_1919466_+	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional	NA|343aa|up_7|NZ_CP026076.1_1919458_1920487_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|189aa|up_6|NZ_CP026076.1_1920489_1921056_+	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]	NA|493aa|up_5|NZ_CP026076.1_1921070_1922549_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|416aa|up_4|NZ_CP026076.1_1922570_1923818_+	PRK13790, PRK13790, phosphoribosylamine--glycine ligase; Provisional	NA|269aa|up_3|NZ_CP026076.1_1924082_1924889_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|467aa|up_2|NZ_CP026076.1_1924881_1926282_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|192aa|up_1|NZ_CP026076.1_1926296_1926872_-	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]	NA|40aa|up_0|NZ_CP026076.1_1927235_1927355_+	NA	NA|45aa|down_0|NZ_CP026076.1_1927455_1927590_-	NA	NA|432aa|down_1|NZ_CP026076.1_1927741_1929037_+	NA	NA|391aa|down_2|NZ_CP026076.1_1929461_1930634_+	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|181aa|down_3|NZ_CP026076.1_1930687_1931230_+	pfam05128, DUF697, Domain of unknown function (DUF697)	NA|89aa|down_4|NZ_CP026076.1_1931383_1931650_+	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional	NA|573aa|down_5|NZ_CP026076.1_1931652_1933371_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|78aa|down_6|NZ_CP026076.1_1933607_1933841_-	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|454aa|down_7|NZ_CP026076.1_1934038_1935400_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|340aa|down_8|NZ_CP026076.1_1935396_1936416_+	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]	NA|221aa|down_9|NZ_CP026076.1_1936548_1937211_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
GCF_001018685.2_ASM101868v2	NZ_CP026076	Staphylococcus aureus strain FDAARGOS_4 chromosome, complete genome	8	2713118-2713328	2	CRT	no		DEDDh,csa3,WYL,cas3,DinG	Orphan	CAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGANNN	41	3	28	2713156-2713176|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713215-2713234|2713273-2713290	NZ_CP026076.1_2713097-2713117|NZ_CP026076.1_59444-59425|NZ_CP026076.1_608303-608322|NZ_CP026076.1_858476-858457|NZ_CP026076.1_1017073-1017092|NZ_CP026076.1_1160271-1160290|NZ_CP026076.1_1242146-1242165|NZ_CP026076.1_1242201-1242220|NZ_CP026076.1_1242256-1242275|NZ_CP026076.1_1682214-1682195|NZ_CP026076.1_1682269-1682250|NZ_CP026076.1_1687818-1687799|NZ_CP026076.1_1687876-1687857|NZ_CP026076.1_1731036-1731017|NZ_CP026076.1_1813387-1813368|NZ_CP026076.1_1937361-1937342|NZ_CP026076.1_2219787-2219806|NZ_CP026076.1_2309204-2309185|NZ_CP026076.1_2534555-2534536|NZ_CP026076.1_2713042-2713061|NZ_CP026076.1_68852-68833|NZ_CP026076.1_1160326-1160345|NZ_CP026076.1_1695084-1695065|NZ_CP026076.1_2011638-2011657|NZ_CP026076.1_2269132-2269113|NZ_CP026076.1_2568521-2568502|NZ_CP026076.1_1655177-1655196|NZ_CP026076.1_2713100-2713117	NA	3	3	Orphan	DEDDh,csa3,WYL,cas3,DinG	NA,NA	NA|199aa|up_9|NZ_CP026076.1_2703637_2704234_-	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|286aa|up_8|NZ_CP026076.1_2704262_2705120_-	PRK13668, PRK13668, hypothetical protein; Provisional	NA|104aa|up_7|NZ_CP026076.1_2705219_2705531_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|359aa|up_6|NZ_CP026076.1_2705595_2706672_-	cd05656, M42_Frv, M42 Peptidase, endoglucanases	NA|104aa|up_5|NZ_CP026076.1_2706758_2707070_+	COG5584, COG5584, Predicted small secreted protein [Function unknown]	NA|281aa|up_4|NZ_CP026076.1_2707194_2708037_-	cd07728, YtnP-like_MBL-fold, Bacillus subtilis YtnP and related proteins; MBL-fold metallo hydrolase domain	NA|215aa|up_3|NZ_CP026076.1_2708506_2709151_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|264aa|up_2|NZ_CP026076.1_2709165_2709957_-	COG0510, ycfN, Thiamine kinase and related kinases [Coenzyme transport and metabolism]	NA|283aa|up_1|NZ_CP026076.1_2710506_2711355_-	TIGR01121, D-alanine_aminotransferase, D-amino acid aminotransferase	NA|470aa|up_0|NZ_CP026076.1_2711358_2712768_-	PRK07318, PRK07318, dipeptidase PepV; Reviewed	NA|141aa|down_0|NZ_CP026076.1_2713631_2714054_-	pfam12732, YtxH, YtxH-like protein	NA|232aa|down_1|NZ_CP026076.1_2714070_2714766_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|554aa|down_2|NZ_CP026076.1_2714762_2716424_-	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins	NA|423aa|down_3|NZ_CP026076.1_2716830_2718099_+	pfam03486, HI0933_like, HI0933-like protein	NA|2187aa|down_4|NZ_CP026076.1_2718215_2724776_-	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain	NA|104aa|down_5|NZ_CP026076.1_2725101_2725413_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|805aa|down_6|NZ_CP026076.1_2725434_2727849_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|394aa|down_7|NZ_CP026076.1_2728139_2729321_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|318aa|down_8|NZ_CP026076.1_2729430_2730384_+	COG1242, COG1242, Predicted Fe-S oxidoreductase [General function prediction only]	NA|188aa|down_9|NZ_CP026076.1_2730380_2730944_+	pfam06962, rRNA_methylase, Putative rRNA methylase
