The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	0	9671	2878505	transposase	Streptomyces_phage(100.0%)	6	NA	NA
WP_000717561.1|41_1010_-	6-phosphofructokinase	NA	NA	NA	NA	NA
WP_001557163.1|1249_2569_+|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
WP_000883648.1|2798_3743_-	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
WP_000471571.1|3742_4600_-	acetyl-CoA carboxylase carboxyltransferase subunit beta	NA	NA	NA	NA	NA
WP_000058389.1|4794_6024_-	NAD-dependent malic enzyme 4	NA	NA	NA	NA	NA
WP_000226919.1|6473_9671_-	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	30.5	4.2e-135
>prophage 2
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	28783	32916	2878505		Paramecium_bursaria_Chlorella_virus(50.0%)	4	NA	NA
WP_000174284.1|28783_29527_-	glycerophosphoryl diester phosphodiesterase	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	30.4	1.7e-18
WP_000553924.1|29606_30053_+	OsmC family protein	NA	NA	NA	NA	NA
WP_000291420.1|30167_31325_+	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_000808849.1|31311_32916_+	phosphoglycerate dehydrogenase	NA	A0A2H4PQU8	Staphylococcus_phage	100.0	1.2e-114
>prophage 3
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	36685	39316	2878505	tRNA	uncultured_Mediterranean_phage(50.0%)	2	NA	NA
WP_001279338.1|36685_37960_+	trypsin-like peptidase domain-containing protein	NA	A0A1B1IRD3	uncultured_Mediterranean_phage	29.0	1.7e-10
WP_000186029.1|38053_39316_-|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.1	2.7e-85
>prophage 4
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	45920	47627	2878505		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000862102.1|45920_47627_-	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	99.8	2.1e-274
>prophage 5
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	56367	61695	2878505		Mycobacterium_phage(50.0%)	3	NA	NA
WP_000118314.1|56367_60192_-	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.0	2.6e-83
WP_001048368.1|60212_60809_-	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_001091387.1|60837_61695_-	DUF1444 domain-containing protein	NA	A0A2H4PQY3	Staphylococcus_phage	100.0	6.8e-72
>prophage 6
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	65082	138724	2878505	tRNA,protease	Staphylococcus_phage(95.56%)	65	NA	NA
WP_001266161.1|65082_65727_-|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_000434765.1|65741_66533_-	phosphotransferase family protein	NA	NA	NA	NA	NA
WP_000411084.1|67082_67931_-	D-amino-acid transaminase	NA	NA	NA	NA	NA
WP_000265417.1|67934_69344_-	Mn(2+)-dependent dipeptidase Sapep	NA	NA	NA	NA	NA
WP_001051856.1|69901_70324_-	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_001217125.1|70340_71036_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000004335.1|71032_72694_-	polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_000836461.1|81251_81563_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
WP_001557386.1|81584_84002_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_001025067.1|84289_85471_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
WP_000526539.1|85580_86534_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|86530_87094_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|87216_87618_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|88187_89015_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|89017_89137_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196362.1|89248_90250_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
WP_001008549.1|90371_90836_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001159037.1|90848_92030_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_000493887.1|92040_92673_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
WP_000077358.1|92679_93723_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	5.3e-196
WP_001261668.1|94203_95706_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000221177.1|96228_96543_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_000989121.1|96542_97835_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_001032830.1|97921_98776_-	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	1.3e-38
WP_000384171.1|99051_99276_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671057.1|99474_99945_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_001153742.1|100057_100501_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030469.1|100487_100931_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001168903.1|101226_101862_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096495.1|102301_103015_-	transaldolase	NA	M1PR54	Cyanophage	35.3	9.4e-19
WP_000091442.1|103274_103577_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|103832_104198_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623470.1|104194_104548_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_000453306.1|106544_107378_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000366163.1|107589_108498_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933820.1|108619_109816_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000109906.1|110187_111780_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_001822900.1|112157_112904_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.4e-142
WP_000672013.1|112908_113382_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_000718107.1|113447_113705_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778528.1|113701_114703_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
WP_000348364.1|114707_116186_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
WP_012840523.1|116344_116800_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
WP_001795210.1|117102_117753_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	94.0	2.9e-51
WP_000070642.1|117833_118829_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
WP_000669024.1|118903_119530_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
WP_000627540.1|119570_119912_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
WP_000414216.1|120012_120585_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
WP_001801861.1|121939_122035_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001792025.1|122157_122259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072626.1|123334_124564_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	6.8e-134
WP_000028669.1|124556_126113_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	1.6e-289
WP_001791797.1|126276_126411_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038752.1|126473_127193_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
WP_011447030.1|127294_127402_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038704.1|127350_128070_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
WP_001038872.1|128190_128910_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
WP_001039454.1|128967_129690_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
WP_001039427.1|129814_130522_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
WP_001092780.1|131484_132066_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.8	9.6e-54
WP_000550252.1|133012_133486_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000543854.1|133490_134282_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000782463.1|134651_135635_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
WP_000473596.1|135636_136572_-	bi-component leukocidin LukED subunit E	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
WP_000206343.1|137935_138724_+	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	98.5	3.6e-144
>prophage 7
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	142773	147038	2878505		Staphylococcus_phage(100.0%)	4	NA	NA
WP_001236362.1|142773_143529_-	staphylococcal enterotoxin type N	NA	A0A075M4C7	Staphylococcus_phage	41.4	6.0e-40
WP_000713847.1|144492_145221_-	staphylococcal enterotoxin type I	NA	A0A1X9H080	Staphylococcus_phage	39.2	1.1e-27
WP_000821658.1|145255_145975_-	staphylococcal enterotoxin type M	NA	A0A1X9H080	Staphylococcus_phage	35.8	2.3e-25
WP_010922839.1|146255_147038_-	staphylococcal enterotoxin type O	NA	A0A1X9H080	Staphylococcus_phage	36.7	1.1e-31
>prophage 8
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	154822	155563	2878505		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000216874.1|154822_155563_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
>prophage 9
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	165193	165538	2878505		Streptococcus_phage(100.0%)	1	NA	NA
WP_000290301.1|165193_165538_-	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
>prophage 10
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	176135	176858	2878505		Planktothrix_phage(100.0%)	1	NA	NA
WP_000590809.1|176135_176858_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.3e-36
>prophage 11
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	194929	196666	2878505		Bacillus_phage(100.0%)	1	NA	NA
WP_000597238.1|194929_196666_-	SAV1866 family putative multidrug efflux ABC transporter	NA	W8CYL7	Bacillus_phage	30.4	1.7e-53
>prophage 12
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	212146	212776	2878505		Bacillus_phage(100.0%)	1	NA	NA
WP_000153535.1|212146_212776_-	two-component system response regulator VraR	NA	W8CYM9	Bacillus_phage	30.8	8.1e-06
>prophage 13
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	217830	218244	2878505		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001557448.1|217830_218244_-	hypothetical protein	NA	A0A1Q1PVU5	Staphylococcus_phage	38.3	6.7e-17
>prophage 14
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	221696	226725	2878505		Staphylococcus_phage(33.33%)	5	NA	NA
WP_000613738.1|221696_222251_+	3'-5' exonuclease	NA	B5WZL1	Staphylococcus_phage	35.7	1.2e-29
WP_000140172.1|222318_223389_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_000548781.1|223635_224166_-	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_001147865.1|224335_225697_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	43.6	1.4e-103
WP_001231451.1|225777_226725_-	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.8	1.2e-16
>prophage 15
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	230391	342840	2878505	portal,protease,head,capsid,tRNA,coat,terminase,tail,integrase,holin	Staphylococcus_phage(84.04%)	137	226889:226915	349246:349272
226889:226915	attL	CCAACTTGCACATTATTGTAAGCTGAC	NA	NA	NA	NA
WP_000170162.1|230391_230694_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957020.1|231060_232599_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831700.1|232687_233887_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774556.1|233899_235903_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.2e-114
WP_000992924.1|235906_238099_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272054.1|238095_238788_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|238959_239262_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572878.1|239370_240666_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_000827746.1|241525_242692_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434933.1|242722_243049_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669862.1|243340_243514_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|243494_244097_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040866.1|244367_245189_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_047211852.1|245181_246651_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.3	9.1e-109
WP_000897635.1|246834_247911_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177828.1|247930_248725_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|248796_248904_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323161.1|248914_250477_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275727.1|250681_251779_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	3.3e-47
WP_000149686.1|252147_252708_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|252760_253690_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001792184.1|253882_254056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021210.1|254107_255487_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181315.1|255606_256635_-	lactonase family protein	NA	NA	NA	NA	NA
WP_000205106.1|256904_257306_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000267034.1|257878_258052_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188043.1|258502_259543_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713072.1|259599_260442_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|260438_260996_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|261055_261580_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|261700_262264_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221651.1|262329_263070_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763043.1|263069_263942_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
WP_000645727.1|263938_264619_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991306.1|264619_265516_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
WP_000691584.1|265512_265893_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|266150_266327_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|266569_266668_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068542.1|266867_268154_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000671712.1|268432_268723_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001557458.1|268737_270168_-	extracellular adherence protein Eap/Map	NA	NA	NA	NA	NA
WP_000669791.1|271124_271304_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	98.3	1.4e-24
WP_001791826.1|271614_271875_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702263.1|271926_272277_-	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_000920038.1|273773_274265_-	staphylokinase	NA	A0A1W6JQ12	Staphylococcus_phage	99.4	4.7e-86
WP_000861035.1|274479_275211_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	99.2	1.8e-145
WP_000611512.1|275222_275477_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_031762631.1|275528_275636_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011447039.1|275688_275865_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_000750412.1|275973_276747_-	staphylococcal enterotoxin type A	NA	A0A1X9H080	Staphylococcus_phage	100.0	1.1e-145
WP_000340977.1|277119_277494_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_001262621.1|277549_277837_-	hypothetical protein	NA	A0A1X9H0N7	Staphylococcus_phage	100.0	7.6e-44
WP_001000058.1|277882_278035_-	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
WP_000582139.1|278027_281810_-	hypothetical protein	NA	A0A1X9H096	Staphylococcus_phage	99.5	0.0e+00
WP_000567408.1|281825_283310_-|tail	phage tail family protein	tail	A0A2I6PDJ0	Staphylococcus_phage	100.0	1.2e-297
WP_001795393.1|283306_287836_-|tail	phage tail tape measure protein	tail	A0A1X9H084	Staphylococcus_phage	100.0	0.0e+00
WP_001549167.1|287892_288030_-	hypothetical protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	3.4e-18
WP_001096355.1|288080_288431_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_072050172.1|288480_288705_-	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	98.6	8.8e-32
WP_000268741.1|288746_289391_-|tail	phage tail protein	tail	W5R9H4	Staphylococcus_phage	100.0	6.5e-120
WP_000565498.1|289391_289799_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114227.1|289795_290200_-	HK97 gp10 family phage protein	NA	G4KNQ5	Staphylococcus_phage	99.3	2.1e-68
WP_000755150.1|290196_290559_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000150936.1|290542_290827_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238236.1|290816_291101_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000154559.1|291120_292266_-|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000642728.1|292289_293027_-|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000025274.1|293010_294198_-|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000625088.1|294213_295875_-|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000402904.1|295871_296216_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988330.1|296345_296645_-	HNH endonuclease	NA	G4KNP8	Staphylococcus_phage	100.0	4.6e-52
WP_000590122.1|296876_297293_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000265043.1|297320_297521_-	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
WP_000195778.1|297668_297875_-	DUF1381 domain-containing protein	NA	S4V684	Staphylococcus_phage	82.4	2.8e-24
WP_001209219.1|297891_298065_-	hypothetical protein	NA	S4SVD5	Staphylococcus_phage	100.0	3.6e-25
WP_000181819.1|298101_298635_-	dUTP pyrophosphatase	NA	A0A0H3U2T1	Staphylococcus_phage	100.0	1.6e-95
WP_000700108.1|298627_298870_-	hypothetical protein	NA	A0A2I6PF40	Staphylococcus_phage	100.0	3.7e-36
WP_001065101.1|298859_299096_-	DUF1024 family protein	NA	A0A0H3U313	Staphylococcus_phage	100.0	5.3e-35
WP_001793991.1|299088_299460_-	hypothetical protein	NA	A0ZS31	Staphylococcus_virus	96.7	3.6e-62
WP_000131382.1|299468_299711_-	hypothetical protein	NA	A0A0H3U4B0	Staphylococcus_phage	98.8	1.6e-39
WP_000101288.1|299714_300083_-	hypothetical protein	NA	A0A0H3U2T3	Staphylococcus_phage	100.0	2.0e-49
WP_000401977.1|300095_300500_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A0H3U2W2	Staphylococcus_phage	100.0	1.4e-72
WP_000338530.1|300508_300727_-	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	100.0	1.0e-37
WP_000148333.1|300733_301627_-	DnaD domain-containing protein	NA	A0A1P8L6F0	Staphylococcus_phage	100.0	3.2e-141
WP_000934760.1|301656_302127_-	single-stranded DNA-binding protein	NA	A0EWX3	Staphylococcus_phage	99.4	7.4e-81
WP_071621397.1|302127_302745_-	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	100.0	9.1e-87
WP_000138475.1|302825_303746_-	recombinase RecT	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
WP_000700557.1|303747_305691_-	AAA family ATPase	NA	A0A2I6PDH3	Staphylococcus_phage	98.0	0.0e+00
WP_001205732.1|305699_305963_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000291483.1|305971_306232_-	DUF1108 family protein	NA	A0A2I6PEM2	Staphylococcus_phage	93.0	1.2e-40
WP_000165366.1|306236_306539_-	DUF2482 family protein	NA	A0A0F6N3N3	Staphylococcus_phage	62.0	8.0e-28
WP_000066023.1|306628_306790_-	DUF1270 family protein	NA	C8CGY5	Staphylococcus_phage	88.7	2.0e-17
WP_001120197.1|306786_307107_-	DUF771 domain-containing protein	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
WP_000275058.1|307161_307794_+	hypothetical protein	NA	A7TW95	Staphylococcus_phage	100.0	1.5e-113
WP_000939496.1|307808_307949_-	hypothetical protein	NA	A0A2I6PDG0	Staphylococcus_phage	100.0	1.9e-16
WP_001148861.1|307979_308177_-	hypothetical protein	NA	A0A1W6JPV3	Staphylococcus_phage	100.0	1.2e-24
WP_001148341.1|308192_308948_-	phage antirepressor KilAC domain-containing protein	NA	A0A1P8L6G2	Staphylococcus_phage	100.0	3.3e-139
WP_000351243.1|309004_309544_+	hypothetical protein	NA	A7TW92	Staphylococcus_phage	100.0	1.7e-97
WP_000435341.1|309567_309828_-	transcriptional regulator	NA	A7TW91	Staphylococcus_phage	100.0	2.7e-40
WP_000639927.1|309841_310084_-	DUF739 family protein	NA	Q9G038	Staphylococcus_virus	100.0	2.8e-39
WP_001083967.1|310247_310964_+	helix-turn-helix domain-containing protein	NA	R9QTP6	Staphylococcus_phage	100.0	9.2e-131
WP_000804507.1|310975_311833_+	HIRAN domain-containing protein	NA	R9QTP0	Staphylococcus_phage	99.6	3.5e-161
WP_000705248.1|311877_312060_+	hypothetical protein	NA	M9NSW6	Staphylococcus_phage	100.0	4.1e-27
WP_000825947.1|312159_312624_+	hypothetical protein	NA	A0EWV3	Staphylococcus_phage	100.0	1.1e-28
WP_000857191.1|312682_313720_+|integrase	site-specific integrase	integrase	A0EWV2	Staphylococcus_phage	100.0	9.1e-180
WP_000595392.1|314838_315855_-	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
WP_000791413.1|315876_316932_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.6	7.4e-36
WP_000206624.1|317367_318570_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_001045082.1|318877_320185_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000746599.1|321201_321924_+	staphylococcal enterotoxin type L	NA	A0A1X9H080	Staphylococcus_phage	34.9	2.1e-26
WP_000278088.1|322092_322893_-	staphylococcal enterotoxin type C3	NA	A0A097PAT7	Streptococcus_pyogenes_phage	47.5	6.1e-51
WP_001035616.1|323679_324240_+	DUF4888 domain-containing protein	NA	Q4ZBG8	Staphylococcus_virus	68.1	5.4e-62
WP_001035599.1|325118_325823_+	toxic shock syndrome toxin TSST-1	NA	NA	NA	NA	NA
WP_001293088.1|325977_326547_-|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	97.4	7.9e-101
WP_000358774.1|326543_326885_-	hypothetical protein	NA	A0A1W6JQM3	Staphylococcus_phage	99.1	1.4e-57
WP_000771368.1|326887_327415_-|coat	spore coat protein	coat	A0A1W6JQH7	Staphylococcus_phage	97.1	3.5e-87
WP_000448770.1|327465_327684_-|capsid	capsid morphogenesis B protein	capsid	NA	NA	NA	NA
WP_000846280.1|327701_328280_-	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.9	4.8e-29
WP_001190615.1|328291_328633_-	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	99.1	1.4e-57
WP_001019810.1|329082_329724_-	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	87.8	2.3e-104
WP_000998179.1|329720_330005_-	hypothetical protein	NA	A0A1W6JQE4	Staphylococcus_phage	100.0	1.2e-49
WP_001039169.1|330006_330369_-	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	98.3	5.8e-65
WP_001668899.1|330654_332124_-	hypothetical protein	NA	A0A1W6JQD6	Staphylococcus_phage	99.6	3.4e-289
WP_001002695.1|332140_333010_-	primase C-terminal domain-containing protein	NA	A0A1W6JQL5	Staphylococcus_phage	96.9	3.2e-162
WP_001103933.1|333076_333394_-	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	48.1	1.2e-18
WP_001058487.1|333396_333606_-	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	92.8	2.2e-29
WP_000784893.1|333598_333745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000164237.1|333741_333969_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001060953.1|334004_334211_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072474260.1|334368_335016_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000121223.1|335021_336128_+|integrase	site-specific integrase	integrase	H0UST3	Bacillus_phage	44.2	5.9e-76
WP_001085183.1|336690_337155_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	98.7	1.6e-80
WP_001050048.1|337176_339549_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	38.8	4.3e-92
WP_001165959.1|339582_340323_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000556760.1|340438_340672_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_000785252.1|340738_341197_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001121760.1|341535_342840_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	80.7	6.7e-196
349246:349272	attR	GTCAGCTTACAATAATGTGCAAGTTGG	NA	NA	NA	NA
>prophage 16
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	352179	358169	2878505		Streptococcus_phage(40.0%)	5	NA	NA
WP_001049165.1|352179_352767_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.3	8.2e-53
WP_000006551.1|353330_354275_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.6	3.1e-54
WP_001248939.1|354385_355381_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	41.9	4.8e-53
WP_000369722.1|355377_356289_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	36.1	1.1e-08
WP_000134963.1|357233_358169_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.2	2.9e-84
>prophage 17
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	362616	365463	2878505		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000662676.1|362616_365463_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.1	0.0e+00
>prophage 18
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	368781	369621	2878505		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000753319.1|368781_369621_-	CHAP domain-containing protein	NA	A0A2H4J675	uncultured_Caudovirales_phage	42.2	3.5e-12
>prophage 19
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	375699	381405	2878505		Streptococcus_phage(66.67%)	5	NA	NA
WP_001557172.1|375699_376782_-	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	35.2	9.9e-44
WP_000686344.1|377145_378012_-	DegV family protein	NA	NA	NA	NA	NA
WP_000192949.1|378155_378797_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	47.7	5.3e-37
WP_000258150.1|378961_380017_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_000460983.1|380334_381405_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	1.3e-16
>prophage 20
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	390684	414101	2878505		uncultured_Caudovirales_phage(35.71%)	19	NA	NA
WP_000616840.1|390684_391446_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
WP_001245577.1|391442_392399_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000876318.1|392385_393357_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_000499195.1|393395_393551_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000562498.1|393731_394703_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855514.1|394820_396926_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000692521.1|396888_397287_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068501.1|398087_398954_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|398973_399474_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193751.1|399814_401320_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_031760357.1|401397_401499_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429006.1|401589_402507_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_000197262.1|403329_403872_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663030.1|404210_405269_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000180991.1|405508_407023_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_000589248.1|407015_407993_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	7.1e-25
WP_000983677.1|408214_409996_-	DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	37.0	6.5e-77
WP_000525106.1|410007_411891_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.6	2.0e-55
WP_000098285.1|412160_414101_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	39.5	1.3e-110
>prophage 21
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	417240	427087	2878505		Pandoravirus(12.5%)	12	NA	NA
WP_001217796.1|417240_418392_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.7	6.0e-23
WP_000604514.1|418375_418969_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_000446724.1|419319_419988_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000941336.1|419989_420409_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062972.1|420412_421126_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000604990.1|421224_421809_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093562.1|422088_422529_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|422871_423345_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|423319_424006_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244415.1|424005_425061_+	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000702778.1|425132_426116_-	lipoteichoic acid-specific glycosylation protein CsbB	NA	A0A192Y8W7	Salmonella_phage	43.3	1.1e-62
WP_000931238.1|426247_427087_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	41.5	9.6e-55
>prophage 22
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	438699	440073	2878505		Powai_lake_megavirus(100.0%)	1	NA	NA
WP_000952038.1|438699_440073_-	deoxyribodipyrimidine photo-lyase	NA	A0A167RC11	Powai_lake_megavirus	33.6	2.3e-45
>prophage 23
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	445050	451330	2878505		Bacillus_phage(33.33%)	6	NA	NA
WP_000857598.1|445050_446724_-	amino acid ABC transporter ATP-binding/permease protein	NA	W8CYL7	Bacillus_phage	23.2	3.4e-11
WP_000737160.1|446720_448352_-	ABC transporter ATP-binding protein/permease	NA	W5SAS9	Pithovirus	27.8	6.7e-12
WP_000469894.1|448570_449446_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000358498.1|449617_450301_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000148826.1|450303_450762_+	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_000820897.1|450763_451330_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	36.9	4.7e-21
>prophage 24
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	458120	458594	2878505		Pandoravirus(100.0%)	1	NA	NA
WP_000833486.1|458120_458594_-	cupin domain-containing protein	NA	A0A291AU44	Pandoravirus	39.4	1.6e-14
>prophage 25
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	463856	464654	2878505		Bacillus_phage(100.0%)	1	NA	NA
WP_000731644.1|463856_464654_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A223LD43	Bacillus_phage	30.2	1.2e-06
>prophage 26
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	469483	470245	2878505		Planktothrix_phage(100.0%)	1	NA	NA
WP_000985996.1|469483_470245_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	7.2e-33
>prophage 27
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	474619	475663	2878505		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_001030775.1|474619_475663_-	alpha/beta hydrolase	NA	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	26.6	2.0e-17
>prophage 28
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	482186	482984	2878505		Planktothrix_phage(100.0%)	1	NA	NA
WP_001080809.1|482186_482984_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.7	1.1e-18
>prophage 29
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	486209	490168	2878505		Bacillus_phage(33.33%)	3	NA	NA
WP_000817954.1|486209_487937_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	43.3	9.7e-110
WP_000793067.1|488357_489653_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	26.9	2.0e-14
WP_000832260.1|489769_490168_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	39.9	3.2e-16
>prophage 30
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	497102	497846	2878505		Indivirus(100.0%)	1	NA	NA
WP_000894464.1|497102_497846_+	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	1.2e-11
>prophage 31
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	510384	510945	2878505	integrase	Streptococcus_phage(100.0%)	1	504538:504552	514535:514549
504538:504552	attL	TTTTGATACCATTTC	NA	NA	NA	NA
WP_001044915.1|510384_510945_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
WP_001044915.1|510384_510945_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
514535:514549	attR	TTTTGATACCATTTC	NA	NA	NA	NA
>prophage 32
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	523773	527127	2878505		Tupanvirus(50.0%)	3	NA	NA
WP_001200747.1|523773_524784_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.6	1.9e-33
WP_001792725.1|525282_525804_-	YwhD family protein	NA	NA	NA	NA	NA
WP_000180234.1|525831_527127_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.9	1.2e-24
>prophage 33
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	534699	536022	2878505		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000860592.1|534699_536022_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	46.8	2.6e-107
>prophage 34
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	547326	547983	2878505		Elephant_endotheliotropic_herpesvirus(100.0%)	1	NA	NA
WP_000455256.1|547326_547983_-	uracil-DNA glycosylase	NA	U5U4C1	Elephant_endotheliotropic_herpesvirus	46.4	1.1e-45
>prophage 35
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	551624	554945	2878505		Staphylococcus_phage(50.0%)	2	NA	NA
WP_001100835.1|551624_553001_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	24.5	3.9e-21
WP_000347061.1|553544_554945_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	32.8	9.4e-55
>prophage 36
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	578306	578969	2878505		Enterococcus_phage(100.0%)	1	NA	NA
WP_001067261.1|578306_578969_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	37.4	1.4e-24
>prophage 37
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	585552	586740	2878505		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_000250823.1|585552_586740_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	30.6	4.4e-45
>prophage 38
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	589768	600722	2878505		Streptococcus_phage(33.33%)	6	NA	NA
WP_000090315.1|589768_591850_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.3	2.7e-66
WP_001137495.1|591972_592443_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_001142337.1|592508_592922_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000031892.1|593019_593274_-	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	NA	NA	NA	NA	NA
WP_001788197.1|593410_597007_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.6	3.3e-67
WP_000918672.1|597170_600722_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.6	2.7e-50
>prophage 39
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	604405	609188	2878505	tRNA	Bacillus_virus(50.0%)	8	NA	NA
WP_001288302.1|604405_604954_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	33.5	8.6e-12
WP_001074473.1|604966_605149_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_001788193.1|605204_605348_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000872882.1|605462_606032_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000664737.1|606112_606637_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_000390332.1|606636_607383_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000370182.1|607390_607795_-	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_000631969.1|607787_609188_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	31.8	1.2e-54
>prophage 40
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	615199	617656	2878505	protease	Escherichia_phage(100.0%)	1	NA	NA
WP_000897132.1|615199_617656_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A1C3S747	Escherichia_phage	41.2	1.4e-133
>prophage 41
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	631282	641553	2878505	tRNA,protease	Catovirus(16.67%)	10	NA	NA
WP_001288202.1|631282_632770_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	41.1	2.1e-92
WP_001790128.1|632822_632915_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000613722.1|633308_633785_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_001154302.1|633781_634147_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_000167944.1|634124_634928_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	29.0	3.0e-21
WP_000057594.1|635143_636076_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	65.7	3.7e-108
WP_000148598.1|636254_637136_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_001167888.1|637363_639457_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	E5EQ50	Micromonas_sp._RCC1109_virus	42.7	4.0e-110
WP_000551283.1|639713_640253_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.8	6.5e-12
WP_001176709.1|640257_641553_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A1V0SI91	Klosneuvirus	24.5	4.8e-13
>prophage 42
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	650809	653274	2878505		Hokovirus(50.0%)	2	NA	NA
WP_000933774.1|650809_651775_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.4	6.1e-45
WP_001252543.1|651921_653274_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	30.4	8.3e-24
>prophage 43
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	659221	662319	2878505	tRNA	Klosneuvirus(50.0%)	2	NA	NA
WP_001051129.1|659221_661195_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	36.2	1.5e-93
WP_000279926.1|661479_662319_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	45.8	2.7e-57
>prophage 44
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	666225	666843	2878505		Streptococcus_phage(100.0%)	1	NA	NA
WP_001272126.1|666225_666843_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	48.3	9.2e-47
>prophage 45
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	675982	677680	2878505		Streptococcus_virus(100.0%)	1	NA	NA
WP_001109040.1|675982_677680_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	42.3	1.9e-54
>prophage 46
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	694328	700366	2878505		Lactobacillus_phage(33.33%)	6	NA	NA
WP_001170257.1|694328_695132_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0A7NU10	Lactobacillus_phage	44.4	2.9e-16
WP_000825530.1|695463_696306_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA	NA
WP_000467994.1|696342_697002_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569281.1|697005_698031_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	3.7e-32
WP_001036648.1|698325_699468_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA	NA
WP_000634098.1|699460_700366_-	cysteine synthase family protein	NA	A0A1W6JIM2	Lactococcus_phage	39.7	3.8e-49
>prophage 47
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	726311	729072	2878505		Staphylococcus_phage(100.0%)	2	NA	NA
WP_000072584.1|726311_727523_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	35.2	2.2e-44
WP_000028662.1|727515_729072_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.0	9.8e-287
>prophage 48
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	740367	741743	2878505	transposase	Paenibacillus_phage(50.0%)	2	NA	NA
WP_000159787.1|740367_740640_+|transposase	transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	50.6	1.3e-13
WP_000041880.1|741038_741743_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	U5U4R0	Staphylococcus_phage	37.1	5.8e-29
>prophage 49
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	746674	771618	2878505	integrase	Streptococcus_phage(78.95%)	25	759769:759783	775697:775711
WP_000181735.1|746674_748468_+	ATP-dependent helicase	NA	E3T5J8	Cafeteria_roenbergensis_virus	23.8	6.9e-26
WP_000421279.1|748667_748982_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	77.7	1.2e-42
WP_001234191.1|749002_749380_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	76.4	9.6e-47
WP_000185761.1|749389_750163_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001130244.1|750184_751588_+	DUF87 domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	66.5	2.2e-176
WP_000426689.1|751769_752954_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	68.1	6.3e-161
WP_000055376.1|752950_753241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001009054.1|753237_753459_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	93.2	3.1e-29
WP_000675717.1|753500_754280_+	abortive infection family protein	NA	NA	NA	NA	NA
WP_000870467.1|754346_754841_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	63.4	2.8e-54
WP_000248477.1|754896_755535_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000723887.1|755606_756002_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	72.6	5.9e-47
WP_000331165.1|755985_758439_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	78.9	0.0e+00
WP_000192393.1|758435_760463_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	65.3	5.1e-195
759769:759783	attL	GTCAAATGATGAATC	NA	NA	NA	NA
WP_000768373.1|760459_761482_+	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	75.5	2.4e-132
WP_000584387.1|761498_762428_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	56.6	1.1e-83
WP_001791010.1|762672_762789_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_000691737.1|762804_764724_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	97.2	0.0e+00
WP_001227350.1|765066_765420_-	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	89.7	2.2e-53
WP_000804879.1|765950_766373_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	68.6	7.5e-48
WP_000845143.1|766369_766600_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	78.9	1.0e-27
WP_000633907.1|767097_767298_+	DUF3173 domain-containing protein	NA	NA	NA	NA	NA
WP_000237797.1|767324_768518_+|integrase	site-specific integrase	integrase	A0A0S2MV79	Bacillus_phage	34.2	8.3e-44
WP_000424963.1|768585_770127_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
WP_000264071.1|770151_771618_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
775697:775711	attR	GTCAAATGATGAATC	NA	NA	NA	NA
>prophage 50
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	782098	783622	2878505		Enterococcus_phage(100.0%)	1	NA	NA
WP_000930514.1|782098_783622_+	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.6	1.4e-40
>prophage 51
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	791936	798265	2878505		Staphylococcus_phage(50.0%)	8	NA	NA
WP_000934799.1|791936_792440_-	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
WP_001261460.1|792460_792757_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_001052484.1|793000_793192_+	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	1.1e-22
WP_001218732.1|793277_794375_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_000157348.1|794386_794590_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_000373073.1|794619_795501_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_001557587.1|795654_796500_-	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHW0	Gordonia_phage	34.4	1.6e-12
WP_000655692.1|797161_798265_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	28.0	3.9e-11
>prophage 52
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	808203	809046	2878505		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_000209551.1|808203_809046_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.2	3.8e-11
>prophage 53
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	830353	833088	2878505		Bodo_saltans_virus(50.0%)	3	NA	NA
WP_000280799.1|830353_831376_-	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	30.4	6.7e-10
WP_001191954.1|831353_832298_-	NAD-dependent deacetylase	NA	NA	NA	NA	NA
WP_000449069.1|832287_833088_-	protein-ADP-ribose hydrolase	NA	A0A2K9L8X2	Tupanvirus	43.4	5.8e-41
>prophage 54
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	851325	852003	2878505		Planktothrix_phage(100.0%)	1	NA	NA
WP_000911017.1|851325_852003_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	1.6e-31
>prophage 55
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	867673	872113	2878505		Mycobacterium_phage(100.0%)	1	NA	NA
WP_000549287.1|867673_872113_-	type VII secretion protein EssC	NA	V5UPA0	Mycobacterium_phage	25.6	6.3e-28
>prophage 56
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	882718	884380	2878505		Amsacta_moorei_entomopoxvirus(50.0%)	2	NA	NA
WP_000570070.1|882718_883378_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	37.2	7.6e-23
WP_000736784.1|883429_884380_-	glycine-glycine endopeptidase LytM	NA	V5R8R0	Arthrobacter_phage	42.7	1.5e-16
>prophage 57
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	893178	894615	2878505		Pandoravirus(100.0%)	1	NA	NA
WP_000164003.1|893178_894615_-	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	25.7	1.1e-29
>prophage 58
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	898375	902914	2878505		Enterobacteria_phage(50.0%)	3	NA	NA
WP_000950281.1|898375_900130_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	31.5	9.0e-63
WP_000608818.1|900374_901049_-	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA	NA
WP_000975351.1|901192_902914_-	poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase	NA	A0A1V0SAH6	Catovirus	37.4	2.1e-11
>prophage 59
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	912241	913285	2878505		Synechococcus_phage(100.0%)	1	NA	NA
WP_000645608.1|912241_913285_-	galactitol-1-phosphate 5-dehydrogenase	NA	E3SJ82	Synechococcus_phage	24.9	3.5e-14
>prophage 60
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	920498	922028	2878505		Vibrio_phage(100.0%)	1	NA	NA
WP_000838205.1|920498_922028_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	50.7	4.5e-10
>prophage 61
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	930903	932409	2878505		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001008400.1|930903_932409_+	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.9	6.0e-39
>prophage 62
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	943516	948875	2878505		Tetraselmis_virus(50.0%)	3	NA	NA
WP_000894660.1|943516_945766_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	45.1	1.7e-186
WP_000837116.1|946353_947322_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_000127990.1|947318_948875_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	27.2	5.8e-13
>prophage 63
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	959085	961145	2878505		Planktothrix_phage(50.0%)	2	NA	NA
WP_000818915.1|959085_960183_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.6	1.4e-24
WP_000166920.1|960566_961145_-	M23 family metallopeptidase	NA	A0A2K9VGT1	Pontimonas_phage	39.1	9.7e-14
>prophage 64
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	969694	972882	2878505		Planktothrix_phage(33.33%)	3	NA	NA
WP_000067352.1|969694_971287_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	4.1e-22
WP_000794565.1|971796_971994_-	helix-turn-helix transcriptional regulator	NA	A0A1V0E021	Clostridioides_phage	43.3	2.1e-05
WP_000960712.1|972159_972882_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.8	4.1e-22
>prophage 65
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	976754	977435	2878505		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571407.1|976754_977435_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	2.9e-33
>prophage 66
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	994240	995425	2878505		Klosneuvirus(100.0%)	1	NA	NA
WP_001084442.1|994240_995425_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	2.0e-34
>prophage 67
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1000261	1010545	2878505		Tupanvirus(50.0%)	3	NA	NA
WP_000605281.1|1000261_1007437_-	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	29.7	4.5e-68
WP_000826862.1|1007883_1009134_-	MFS transporter	NA	NA	NA	NA	NA
WP_000706135.1|1009519_1010545_-	NAD-dependent formate dehydrogenase	NA	A0A1V0SBV6	Catovirus	33.5	8.5e-29
>prophage 68
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1014081	1017312	2878505		Bacillus_virus(50.0%)	4	NA	NA
WP_000590854.1|1014081_1014822_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.1	2.5e-38
WP_000171919.1|1015163_1015676_-	DUF4242 domain-containing protein	NA	NA	NA	NA	NA
WP_000356963.1|1015854_1016058_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001013485.1|1016352_1017312_-	cation transporter	NA	A0A1V0SED0	Indivirus	34.2	1.2e-11
>prophage 69
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1020653	1023138	2878505		Catovirus(50.0%)	2	NA	NA
WP_000723436.1|1020653_1021799_-	type 8 capsular polysaccharide synthesis protein Cap8P	NA	A0A1V0SAG5	Catovirus	25.9	4.6e-23
WP_000779504.1|1021875_1023138_-	type 8 capsular polysaccharide synthesis protein Cap8O	NA	A0A127AXI2	Bacillus_phage	25.5	4.3e-22
>prophage 70
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1029973	1036538	2878505		Catovirus(50.0%)	6	NA	NA
WP_000413171.1|1029973_1031098_-	type 8 capsular polysaccharide synthesis protein Cap8G	NA	A0A1V0SJE0	Klosneuvirus	59.6	6.7e-128
WP_001028283.1|1031101_1032211_-	type 8 capsular polysaccharide synthesis protein Cap8F	NA	NA	NA	NA	NA
WP_000459062.1|1032223_1033252_-	type 8 capsular polysaccharide synthesis protein Cap8E	NA	A0A1V0SAI8	Catovirus	35.3	1.1e-41
WP_000940790.1|1033241_1035065_-	type 8 capsular polysaccharide synthesis protein Cap8D	NA	A0A1V0SAI8	Catovirus	29.1	5.2e-29
WP_000565304.1|1035084_1035849_-	type 8 capsular polysaccharide synthesis protein Cap8C	NA	NA	NA	NA	NA
WP_000037332.1|1035851_1036538_-	type 8 capsular polysaccharide synthesis protein Cap8B	NA	A0A1X9I5D6	Streptococcus_phage	36.1	3.7e-28
>prophage 71
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1040558	1041734	2878505		Clostridium_phage(100.0%)	1	NA	NA
WP_000469833.1|1040558_1041734_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0A7RTT7	Clostridium_phage	27.6	2.0e-29
>prophage 72
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1047173	1047947	2878505		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000078092.1|1047173_1047947_+	phosphonate ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	3.8e-13
>prophage 73
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1055978	1056578	2878505		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_000874681.1|1055978_1056578_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	50.2	7.6e-54
>prophage 74
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1061515	1066611	2878505		Catovirus(50.0%)	6	NA	NA
WP_001793242.1|1061515_1062496_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SAI6	Catovirus	37.0	1.0e-47
WP_001789407.1|1062564_1062687_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000183771.1|1062830_1063607_-	(S)-acetoin forming diacetyl reductase	NA	NA	NA	NA	NA
WP_000414629.1|1063818_1064445_-	MFS transporter	NA	NA	NA	NA	NA
WP_001015551.1|1064640_1065405_-	bifunctional transcriptional regulator/O-phospho-L-serine synthase SbnI	NA	NA	NA	NA	NA
WP_001223713.1|1065408_1066611_-	staphyloferrin B biosynthesis decarboxylase SbnH	NA	A0A2K9L4I2	Tupanvirus	21.1	3.9e-09
>prophage 75
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1074877	1079087	2878505		Lactococcus_phage(50.0%)	4	NA	NA
WP_000570808.1|1074877_1075858_-	2,3-diaminopropionate biosynthesis protein SbnA	NA	A0A1W6JHY1	Lactococcus_phage	35.6	2.1e-40
WP_001045111.1|1076088_1077081_+	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA	NA
WP_000924990.1|1077096_1078092_+	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA	NA
WP_000136633.1|1078088_1079087_+	staphyloferrin B ABC transporter permease subunit SirC	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.8	5.2e-15
>prophage 76
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1112044	1113109	2878505		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000816124.1|1112044_1113109_-	persulfide response sulfurtransferase CstA	NA	A0A2H4PQR9	Staphylococcus_phage	42.5	7.7e-09
>prophage 77
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1123797	1125819	2878505		Streptococcus_phage(100.0%)	1	NA	NA
WP_000852430.1|1123797_1125819_-	K(+)-transporting ATPase subunit B	NA	E4ZFI9	Streptococcus_phage	29.0	6.6e-41
>prophage 78
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1138233	1144565	2878505	integrase	Bacillus_phage(66.67%)	7	1134802:1134816	1144880:1144894
1134802:1134816	attL	AGGATACTTTAAATC	NA	NA	NA	NA
WP_000815646.1|1138233_1139583_+	recombinase family protein	NA	Q9T200	Bacillus_phage	25.1	1.4e-18
WP_001186602.1|1139604_1141233_+	recombinase family protein	NA	A0A0S2SXR4	Bacillus_phage	31.4	2.4e-46
WP_000859153.1|1141750_1142101_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000700853.1|1142187_1142499_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001092169.1|1142516_1143023_+	DUF1643 domain-containing protein	NA	NA	NA	NA	NA
WP_000659050.1|1143043_1143361_+	RadC family protein	NA	NA	NA	NA	NA
WP_000868132.1|1143479_1144565_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
1144880:1144894	attR	GATTTAAAGTATCCT	NA	NA	NA	NA
>prophage 79
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1147896	1148628	2878505		Streptococcus_phage(100.0%)	1	NA	NA
WP_001072201.1|1147896_1148628_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
>prophage 80
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1162134	1162809	2878505	transposase	Staphylococcus_phage(100.0%)	1	NA	NA
WP_001106057.1|1162134_1162809_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
>prophage 81
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1167192	1168155	2878505	transposase	Streptococcus_phage(50.0%)	2	NA	NA
WP_001817892.1|1167192_1167390_+	protein rep	NA	A0A286QS97	Streptococcus_phage	62.0	1.2e-08
WP_001106057.1|1167480_1168155_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
>prophage 82
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1173810	1183820	2878505		Bacillus_phage(40.0%)	7	NA	NA
WP_000088649.1|1173810_1174611_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	35.9	1.0e-37
WP_001104165.1|1174999_1175788_-	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_001060140.1|1175788_1177123_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000871607.1|1177115_1178942_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	31.3	1.6e-30
WP_000101976.1|1178954_1179656_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.2	3.5e-42
WP_000095328.1|1180858_1182142_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.6	1.8e-68
WP_000375647.1|1182419_1183820_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.1	5.4e-111
>prophage 83
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1190511	1199557	2878505	tRNA	Bacillus_virus(50.0%)	5	NA	NA
WP_000884332.1|1190511_1191798_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	50.9	4.5e-88
WP_000177465.1|1192176_1193691_-	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	38.4	1.2e-90
WP_000449218.1|1194016_1194829_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_000819068.1|1194916_1197586_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	35.9	4.6e-119
WP_000255578.1|1197622_1199557_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.9	5.7e-143
>prophage 84
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1209657	1216214	2878505		Faecalibacterium_phage(25.0%)	8	NA	NA
WP_000742837.1|1209657_1210497_+	nucleoid occlusion protein	NA	A0A2K9V477	Faecalibacterium_phage	23.8	2.2e-06
WP_000491382.1|1210947_1211301_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_000779134.1|1211368_1211764_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_001054128.1|1212023_1212593_+	helix-turn-helix transcriptional regulator	NA	D2XQ11	Bacillus_virus	33.3	6.2e-05
WP_001059079.1|1212710_1212911_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	69.8	3.4e-19
WP_000672033.1|1213302_1213494_-	peptide resistance ABC transporter activity modulator VraH	NA	NA	NA	NA	NA
WP_000143647.1|1213585_1215466_-	peptide resistance ABC transporter permease subunit VraE	NA	NA	NA	NA	NA
WP_000154162.1|1215455_1216214_-	peptide resistance ABC transporter ATP-binding subunit VraD	NA	G9BWD6	Planktothrix_phage	39.5	9.0e-36
>prophage 85
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1230466	1232179	2878505		Planktothrix_phage(100.0%)	1	NA	NA
WP_000138654.1|1230466_1232179_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	1.4e-20
>prophage 86
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1237807	1238821	2878505		Faustovirus(100.0%)	1	NA	NA
WP_000639184.1|1237807_1238821_+	histidinol-phosphate aminotransferase family protein	NA	A0A1X7QHI1	Faustovirus	25.9	9.6e-09
>prophage 87
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1251160	1251853	2878505		Streptococcus_phage(100.0%)	1	NA	NA
WP_000185863.1|1251160_1251853_+	polysaccharide biosynthesis tyrosine autokinase	NA	A0A1X9I5D6	Streptococcus_phage	38.0	2.2e-28
>prophage 88
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1277951	1279811	2878505		Enterococcus_phage(100.0%)	1	NA	NA
WP_001125628.1|1277951_1279811_-	amidase domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	37.3	9.7e-15
>prophage 89
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1305494	1307245	2878505		Ectocarpus_siliculosus_virus(50.0%)	2	NA	NA
WP_000143425.1|1305494_1306382_+	nisin susceptibility-associated two-component system sensor histidine kinase NsaS	NA	Q8QNA2	Ectocarpus_siliculosus_virus	22.5	2.5e-05
WP_000923760.1|1306489_1307245_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	3.0e-31
>prophage 90
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1310665	1311163	2878505		Canarypox_virus(100.0%)	1	NA	NA
WP_001065268.1|1310665_1311163_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	33.1	1.8e-21
>prophage 91
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1316157	1318541	2878505		Enterococcus_phage(100.0%)	2	NA	NA
WP_001071729.1|1316157_1318008_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	64.3	9.3e-236
WP_000173331.1|1318004_1318541_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	48.0	3.9e-41
>prophage 92
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1323419	1333533	2878505	holin	Klosneuvirus(50.0%)	9	NA	NA
WP_000066521.1|1323419_1325129_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	32.3	3.8e-58
WP_000011688.1|1325406_1325619_+	sterile alpha motif-like domain-containing protein	NA	NA	NA	NA	NA
WP_001028775.1|1325898_1326342_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_001172341.1|1326535_1328134_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	36.8	5.3e-78
WP_001791980.1|1328193_1328523_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001130051.1|1328818_1330315_+	malate dehydrogenase (quinone)	NA	NA	NA	NA	NA
WP_001031409.1|1330508_1331399_-	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	29.2	1.2e-07
WP_001237629.1|1331521_1331938_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000030072.1|1332195_1333533_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	26.7	1.0e-18
>prophage 93
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1363866	1367656	2878505		Staphylococcus_phage(50.0%)	3	NA	NA
WP_000751263.1|1363866_1364568_+	lytic transglycosylase IsaA	NA	Q4Z8Z7	Staphylococcus_phage	46.4	5.2e-38
WP_000996739.1|1364843_1365332_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000379821.1|1365844_1367656_+	acetyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	31.5	1.3e-35
>prophage 94
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1376090	1380332	2878505		Acanthocystis_turfacea_Chlorella_virus(50.0%)	3	NA	NA
WP_000161369.1|1376090_1377089_+	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	30.2	1.0e-34
WP_000076661.1|1377179_1377386_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_000024139.1|1377923_1380332_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	40.8	3.2e-127
>prophage 95
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1389573	1392609	2878505	protease	Enterobacteria_phage(50.0%)	2	NA	NA
WP_001058993.1|1389573_1391679_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpL	protease	H6X3M6	Enterobacteria_phage	38.5	3.1e-118
WP_000455988.1|1392087_1392609_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	41.1	2.0e-26
>prophage 96
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1399035	1405419	2878505		Yellowstone_lake_phycodnavirus(33.33%)	5	NA	NA
WP_001062663.1|1399035_1400775_+	pyruvate oxidase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.1	6.0e-35
WP_000473678.1|1401075_1403142_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	43.3	8.3e-07
WP_000206031.1|1403521_1403932_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_000240663.1|1403973_1404330_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001228167.1|1404450_1405419_+	alpha/beta hydrolase	NA	A0A167RJ59	Powai_lake_megavirus	26.5	4.0e-12
>prophage 97
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1414708	1415701	2878505		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_000161545.1|1414708_1415701_-	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	32.7	3.7e-37
>prophage 98
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1424979	1425675	2878505		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000538625.1|1424979_1425675_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	37.6	3.0e-38
>prophage 99
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1446071	1446938	2878505		Bacillus_phage(100.0%)	1	NA	NA
WP_000721336.1|1446071_1446938_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	52.6	1.3e-78
>prophage 100
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1455123	1456932	2878505		Streptococcus_phage(100.0%)	1	NA	NA
WP_001835549.1|1455123_1456932_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	37.3	3.9e-93
>prophage 101
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1468161	1468857	2878505		Bacillus_phage(100.0%)	1	NA	NA
WP_000217456.1|1468161_1468857_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	35.6	4.3e-08
>prophage 102
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1473411	1474230	2878505		Acanthamoeba_polyphaga_moumouvirus(100.0%)	1	NA	NA
WP_000824948.1|1473411_1474230_+	SDR family oxidoreductase	NA	L7RG25	Acanthamoeba_polyphaga_moumouvirus	27.2	1.3e-08
>prophage 103
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1482282	1483840	2878505		Planktothrix_phage(50.0%)	2	NA	NA
WP_000173871.1|1482282_1483098_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.8	8.8e-13
WP_000598772.1|1483090_1483840_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.7	9.0e-20
>prophage 104
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1491111	1495540	2878505		Organic_Lake_phycodnavirus(50.0%)	4	NA	NA
WP_000923526.1|1491111_1491774_+	ATP-binding cassette domain-containing protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	30.8	5.5e-21
WP_000072149.1|1491766_1492543_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_000026189.1|1492938_1494126_+	MFS transporter	NA	NA	NA	NA	NA
WP_000700925.1|1494187_1495540_-	carboxylesterase/lipase family protein	NA	A0A0B5J865	Pandoravirus	34.2	2.5e-12
>prophage 105
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1498934	1500793	2878505		Mycoplasma_phage(50.0%)	2	NA	NA
WP_000948974.1|1498934_1500161_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	50.5	6.6e-20
WP_000569120.1|1500157_1500793_+	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	26.2	9.0e-05
>prophage 106
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1518521	1524783	2878505		Bacillus_phage(66.67%)	5	NA	NA
WP_001176863.1|1518521_1519664_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	44.3	5.3e-56
WP_000779360.1|1519931_1520318_+	flippase GtxA	NA	NA	NA	NA	NA
WP_000482652.1|1520451_1520559_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_001064825.1|1521261_1523025_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.7	2.5e-36
WP_000486487.1|1523049_1524783_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.7	9.0e-31
>prophage 107
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1528244	1534015	2878505		Staphylococcus_phage(75.0%)	6	NA	NA
WP_000971550.1|1528244_1529360_+	pyridoxal phosphate-dependent aminotransferase family protein	NA	V5LQ39	Emiliania_huxleyi_virus	24.7	1.6e-20
WP_000286875.1|1529370_1530063_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA	NA
WP_000200956.1|1530073_1530541_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000783428.1|1530592_1531570_-	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	A0A2H4PQH7	Staphylococcus_phage	76.2	7.1e-142
WP_000916704.1|1531571_1532519_-	bi-component gamma-hemolysin HlgCB subunit C	NA	A0A2I6PER8	Staphylococcus_phage	77.5	3.2e-139
WP_000594519.1|1533085_1534015_-	bi-component gamma-hemolysin HlgAB subunit A	NA	A0A2H4PQI5	Staphylococcus_phage	71.1	3.2e-120
>prophage 108
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1541997	1542729	2878505		Bacillus_virus(100.0%)	1	NA	NA
WP_000615461.1|1541997_1542729_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	4.1e-25
>prophage 109
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1559378	1560938	2878505		Escherichia_phage(100.0%)	1	NA	NA
WP_000692648.1|1559378_1560938_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	46.8	4.4e-21
>prophage 110
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1583786	1584821	2878505		Bacillus_virus(100.0%)	1	NA	NA
WP_000655971.1|1583786_1584821_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	26.6	5.8e-17
>prophage 111
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1594666	1598563	2878505		Hokovirus(33.33%)	4	NA	NA
WP_000477338.1|1594666_1596040_-	heme sensor histidine kinase HssS	NA	A0A1V0SGX0	Hokovirus	29.8	2.3e-13
WP_000249497.1|1596032_1596707_-	DNA-binding heme response regulator HssR	NA	W8CYM9	Bacillus_phage	45.2	3.6e-52
WP_000761395.1|1596842_1597898_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001229920.1|1597897_1598563_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.8	1.6e-36
>prophage 112
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1602302	1603511	2878505		Salmonella_phage(100.0%)	1	NA	NA
WP_000999131.1|1602302_1603511_+	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	26.3	3.9e-33
>prophage 113
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1615601	1616501	2878505		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000524823.1|1615601_1616501_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.7	2.1e-15
>prophage 114
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1623873	1624293	2878505		Bacillus_phage(100.0%)	1	NA	NA
WP_000920239.1|1623873_1624293_-	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	NA	Q2LI91	Bacillus_phage	61.9	2.6e-37
>prophage 115
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1629985	1630867	2878505		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_000235289.1|1629985_1630867_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	46.3	3.8e-62
>prophage 116
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1638745	1639381	2878505		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000285450.1|1638745_1639381_+	HAD family hydrolase	NA	A7J6N1	Paramecium_bursaria_Chlorella_virus	27.1	1.6e-09
>prophage 117
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1652186	1656304	2878505		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000739224.1|1652186_1652963_+	glucosaminidase domain-containing protein	NA	H9A0P7	Staphylococcus_phage	41.0	3.8e-37
WP_000684147.1|1653273_1654398_+	FAD-dependent monooxygenase	NA	A0A2K9L3K5	Tupanvirus	22.8	9.3e-13
WP_000417018.1|1654489_1655443_-	2-hydroxyacid dehydrogenase family protein	NA	A0A1V0SBV6	Catovirus	28.9	6.4e-31
WP_000737705.1|1655803_1656304_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	39.3	2.0e-07
>prophage 118
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1660221	1661025	2878505		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000717381.1|1660221_1661025_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	41.3	9.3e-07
>prophage 119
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1680005	1680611	2878505		Pithovirus(100.0%)	1	NA	NA
WP_000913024.1|1680005_1680611_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	30.1	4.3e-12
>prophage 120
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1692581	1695749	2878505		Leptospira_phage(100.0%)	1	NA	NA
WP_000592307.1|1692581_1695749_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.8	1.1e-61
>prophage 121
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1719432	1721099	2878505		Anomala_cuprea_entomopoxvirus(50.0%)	2	NA	NA
WP_000389658.1|1719432_1720242_+	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.0	1.7e-19
WP_000155386.1|1720238_1721099_+	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	23.9	9.7e-10
>prophage 122
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1729883	1737539	2878505		Enterobacteria_phage(33.33%)	7	NA	NA
WP_000411031.1|1729883_1730900_+	RNA-directed DNA polymerase	NA	Q7M2A9	Enterobacteria_phage	29.7	1.0e-18
WP_000655241.1|1731473_1731656_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000130149.1|1732149_1733814_+	acetolactate synthase AlsS	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	25.9	8.0e-45
WP_000186134.1|1733850_1734555_+	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_000769705.1|1734938_1735364_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000044362.1|1735658_1736474_+	HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_001044441.1|1736684_1737539_+	M23 family metallopeptidase	NA	E5G070	Clostridium_phage	37.9	4.9e-06
>prophage 123
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1740921	1743231	2878505		Staphylococcus_phage(50.0%)	4	NA	NA
WP_001015500.1|1740921_1741770_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	39.2	2.0e-44
WP_000875476.1|1742002_1742206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001791678.1|1742292_1742454_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001557494.1|1742490_1743231_-	NAD-dependent protein deacylase	NA	A0A2I2L319	Orpheovirus	29.9	1.5e-14
>prophage 124
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1749551	1750964	2878505		Pandoravirus(100.0%)	1	NA	NA
WP_000169224.1|1749551_1750964_+	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	28.9	3.0e-48
>prophage 125
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1754927	1756490	2878505		Vibrio_phage(100.0%)	1	NA	NA
WP_000792408.1|1754927_1756490_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.6	1.2e-18
>prophage 126
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1766692	1767661	2878505		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000989088.1|1766692_1767661_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.8	1.0e-15
>prophage 127
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1783310	1784219	2878505		Klosneuvirus(100.0%)	1	NA	NA
WP_000167867.1|1783310_1784219_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	32.0	3.2e-27
>prophage 128
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1787810	1795256	2878505		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001048266.1|1787810_1795256_+	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	31.5	3.9e-22
>prophage 129
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1801512	1804332	2878505		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_000334463.1|1801512_1803318_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	38.8	5.2e-98
WP_000908182.1|1803549_1804332_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.1	3.3e-09
>prophage 130
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1815512	1819343	2878505		Clostridium_phage(50.0%)	4	NA	NA
WP_000070866.1|1815512_1815956_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	53.7	5.6e-38
WP_000160304.1|1816076_1816787_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_001083318.1|1817100_1817763_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_001242311.1|1818041_1819343_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.9	3.6e-133
>prophage 131
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1827283	1828894	2878505		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_000159960.1|1827283_1828894_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.6	2.7e-146
>prophage 132
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1836697	1844447	2878505		Bacillus_virus(25.0%)	9	NA	NA
WP_000273358.1|1836697_1837297_+	thymidine kinase	NA	G3MBK1	Bacillus_virus	42.9	6.2e-32
WP_000460242.1|1837297_1838374_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_000248732.1|1838360_1839197_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_000379895.1|1839280_1840327_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	35.3	2.2e-40
WP_000697334.1|1840323_1840743_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA	NA
WP_000654184.1|1840849_1841374_+	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_000120494.1|1841400_1842639_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	8.2e-103
WP_000048712.1|1842666_1843296_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000723418.1|1843319_1844447_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	29.9	1.0e-27
>prophage 133
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1854851	1855247	2878505		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000932694.1|1854851_1855247_+	single-stranded DNA-binding protein	NA	A0A1J0MFK5	Staphylococcus_phage	38.5	1.3e-14
>prophage 134
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1861418	1862066	2878505		Moumouvirus(100.0%)	1	NA	NA
WP_001187630.1|1861418_1862066_-	HD domain-containing protein	NA	H2ED17	Moumouvirus	27.0	8.0e-09
>prophage 135
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1869266	1870787	2878505		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_001178942.1|1869266_1870787_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	2.0e-58
>prophage 136
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1877977	1880005	2878505		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000546611.1|1877977_1880005_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	23.5	2.3e-25
>prophage 137
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1885154	1888538	2878505		Clostridium_botulinum_C_phage(50.0%)	5	NA	NA
WP_000621175.1|1885154_1885517_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	32.8	4.2e-07
WP_000390829.1|1885865_1886867_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_001052491.1|1886985_1887312_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_001190829.1|1887313_1887793_+	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_001041106.1|1887767_1888538_+	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	34.5	1.9e-20
>prophage 138
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1902656	1907380	2878505		Micromonas_sp._RCC1109_virus(50.0%)	4	NA	NA
WP_000094583.1|1902656_1904186_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	28.1	5.5e-08
WP_072399972.1|1904215_1905235_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_000196911.1|1905356_1905611_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_000047811.1|1905610_1907380_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.6	7.0e-63
>prophage 139
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1911140	1925204	2878505	tRNA	Moraxella_phage(16.67%)	12	NA	NA
WP_000159041.1|1911140_1912166_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.6	3.4e-62
WP_000106332.1|1912480_1914091_-	MutS family DNA mismatch repair protein	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	28.1	1.9e-19
WP_001792272.1|1914179_1914308_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000602057.1|1914452_1916381_-	ABC-F type ribosomal protection protein	NA	A0A2K9L0W2	Tupanvirus	30.2	9.3e-53
WP_001283612.1|1916633_1917269_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_000266889.1|1917572_1918652_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_000581076.1|1918711_1918936_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_001052270.1|1919143_1920394_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	31.2	4.5e-40
WP_000790331.1|1920576_1921527_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000141432.1|1921675_1923160_+	glycoside hydrolase family 32 protein	NA	S6ATV4	Bacillus_phage	26.5	2.3e-19
WP_001253315.1|1923156_1924116_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_000688493.1|1924487_1925204_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	33.5	1.4e-25
>prophage 140
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1932373	1946420	2878505	coat,integrase,capsid,terminase	Staphylococcus_phage(60.0%)	22	1932410:1932425	1950586:1950601
WP_000917289.1|1932373_1932658_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
1932410:1932425	attL	AAAAAAGAACAAGAAC	NA	NA	NA	NA
WP_000240642.1|1932733_1934350_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000179343.1|1934418_1935591_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1W6JQD3	Staphylococcus_phage	96.2	5.8e-215
WP_000620857.1|1935604_1936279_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JGT9	uncultured_Caudovirales_phage	45.8	1.6e-39
WP_000153640.1|1936451_1936670_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JB11	uncultured_Caudovirales_phage	66.7	1.3e-19
WP_000481967.1|1936674_1936992_+	helix-turn-helix domain-containing protein	NA	A0A1W6JQE0	Staphylococcus_phage	98.1	9.2e-51
WP_000784885.1|1936988_1937135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001058495.1|1937127_1937337_+	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	94.2	2.9e-29
WP_001078344.1|1937339_1937666_+	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	89.8	1.5e-48
WP_001002689.1|1937730_1938600_+	primase C-terminal domain-containing protein	NA	Q4ZE74	Staphylococcus_phage	96.2	1.5e-164
WP_000447473.1|1938613_1940323_+	DUF927 domain-containing protein	NA	Q4ZE73	Staphylococcus_phage	92.8	1.4e-302
WP_000356942.1|1940632_1941013_+	hypothetical protein	NA	Q4ZE71	Staphylococcus_phage	96.8	1.7e-67
WP_001047698.1|1941009_1941651_+	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	93.0	7.2e-111
WP_001190615.1|1942100_1942442_+	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	99.1	1.4e-57
WP_000846280.1|1942453_1943032_+	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.9	4.8e-29
WP_000448770.1|1943049_1943268_+|capsid	capsid morphogenesis B protein	capsid	NA	NA	NA	NA
WP_000771368.1|1943318_1943846_+|coat	spore coat protein	coat	A0A1W6JQH7	Staphylococcus_phage	97.1	3.5e-87
WP_000358774.1|1943848_1944190_+	hypothetical protein	NA	A0A1W6JQM3	Staphylococcus_phage	99.1	1.4e-57
WP_001293076.1|1944186_1944756_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	98.9	9.3e-102
WP_000801979.1|1945032_1946001_+	Abi family protein	NA	A0A0H4U080	Erysipelothrix_phage	27.3	5.9e-24
WP_106901598.1|1946142_1946241_+	hypothetical protein	NA	A0A2H4JAH5	uncultured_Caudovirales_phage	90.6	5.4e-10
WP_047211745.1|1946270_1946420_+	hypothetical protein	NA	A0A2H4JAH5	uncultured_Caudovirales_phage	52.1	3.5e-08
1950586:1950601	attR	GTTCTTGTTCTTTTTT	NA	NA	NA	NA
>prophage 141
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1950526	1951255	2878505		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000757397.1|1950526_1951255_-	DUF5067 domain-containing protein	NA	H9A0X8	Staphylococcus_phage	37.5	1.3e-18
>prophage 142
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1960407	1961651	2878505		Bacillus_phage(50.0%)	2	NA	NA
WP_000141557.1|1960407_1961094_+	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	54.2	1.7e-33
WP_001059082.1|1961450_1961651_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	70.8	1.4e-20
>prophage 143
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1965030	1970229	2878505		Streptococcus_phage(50.0%)	8	NA	NA
WP_001140693.1|1965030_1965612_+	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	40.9	5.5e-33
WP_000255551.1|1965684_1966302_-	amino acid transporter	NA	NA	NA	NA	NA
WP_000569884.1|1966456_1966951_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000974460.1|1967349_1967772_-	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_000150011.1|1967919_1968636_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	30.1	1.5e-16
WP_000422908.1|1968718_1969258_+	nitroreductase	NA	NA	NA	NA	NA
WP_001147952.1|1969408_1969729_-	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	36.4	3.1e-06
WP_000589549.1|1969872_1970229_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	46.6	4.7e-19
>prophage 144
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1973545	1974571	2878505		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571207.1|1973545_1974571_+	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	9.4e-28
>prophage 145
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	1978058	2037652	2878505	portal,head,capsid,transposase,plate,terminase,tail,integrase,holin	Staphylococcus_phage(76.06%)	86	1982151:1982167	1991151:1991167
WP_000168845.1|1978058_1978820_+	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
WP_000205567.1|1978917_1980225_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_001006450.1|1980330_1981581_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	1.1e-110
WP_001010508.1|1981570_1982035_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
1982151:1982167	attL	CGCCGTTGTAAATATAT	NA	NA	NA	NA
WP_001074405.1|1982185_1983583_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_001145728.1|1983650_1984700_-|integrase	site-specific integrase	integrase	A1KWY3	Staphylococcus_virus	100.0	1.6e-203
WP_000337826.1|1984811_1984991_+	hypothetical protein	NA	A0EWN7	Staphylococcus_virus	100.0	8.3e-25
WP_000392186.1|1984970_1985903_-	hypothetical protein	NA	A0EWN8	Staphylococcus_virus	100.0	3.9e-174
WP_000524998.1|1985934_1986399_-	hypothetical protein	NA	A0A2I6PEK4	Staphylococcus_phage	94.1	3.6e-80
WP_000429766.1|1986411_1986741_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PEN2	Staphylococcus_phage	100.0	3.2e-54
WP_001115060.1|1986901_1987093_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PEL6	Staphylococcus_phage	100.0	2.3e-28
WP_000939498.1|1987181_1987325_+	hypothetical protein	NA	W5R8I6	Staphylococcus_phage	100.0	2.5e-16
WP_000642492.1|1987314_1987524_-	hypothetical protein	NA	W5R9J5	Staphylococcus_phage	100.0	1.2e-30
WP_001148557.1|1987580_1988360_+	phage antirepressor KilAC domain-containing protein	NA	M1RZB2	Staphylococcus_phage	92.6	4.1e-132
WP_000187184.1|1988360_1988585_+	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	100.0	3.2e-34
WP_000939498.1|1988624_1988768_+	hypothetical protein	NA	W5R8I6	Staphylococcus_phage	100.0	2.5e-16
WP_001838167.1|1988789_1989437_-	hypothetical protein	NA	S4V9K2	Staphylococcus_phage	100.0	2.0e-113
WP_000977378.1|1989507_1989729_+	hypothetical protein	NA	E0Y3P2	Staphylococcus_virus	100.0	1.5e-31
WP_000066007.1|1989721_1989883_+	DUF1270 domain-containing protein	NA	A0A0E3XBK7	Staphylococcus_phage	96.2	4.3e-20
WP_000165363.1|1989975_1990278_+	DUF2482 family protein	NA	A0A0F6N3N3	Staphylococcus_phage	100.0	1.4e-48
WP_000291068.1|1990282_1990543_+	DUF1108 family protein	NA	C8CGY6	Staphylococcus_phage	100.0	8.9e-44
WP_000815401.1|1990552_1990774_+	DUF2483 family protein	NA	A7TWM6	Staphylococcus_phage	100.0	3.2e-34
WP_000934774.1|1991390_1991816_+	single-stranded DNA-binding protein	NA	B7T0A5	Staphylococcus_virus	88.7	2.1e-58
1991151:1991167	attR	ATATATTTACAACGGCG	NA	NA	NA	NA
WP_001004505.1|1991826_1992378_+	HNH endonuclease	NA	A0A2H4PQR4	Staphylococcus_phage	98.9	5.1e-105
WP_001121803.1|1992378_1993053_+	hypothetical protein	NA	R4IH15	Staphylococcus_phage	97.8	1.5e-127
WP_000414755.1|1993192_1993474_-	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_000132051.1|1993538_1994270_+	helix-turn-helix domain-containing protein	NA	A0A1J0MGB2	Staphylococcus_phage	78.8	9.8e-80
WP_000443353.1|1994282_1995068_+	ATP-binding protein	NA	A0A0H4J332	Staphylococcus_phage	100.0	1.9e-145
WP_000628836.1|1995064_1995223_+	hypothetical protein	NA	A0A2I6PDX0	Staphylococcus_phage	94.2	1.1e-20
WP_001123695.1|1995235_1995457_+	DUF3269 family protein	NA	A0A0H3U2V4	Staphylococcus_phage	100.0	2.2e-35
WP_000049784.1|1995466_1995871_+	DUF1064 domain-containing protein	NA	A7TWN5	Staphylococcus_phage	100.0	7.1e-72
WP_001187242.1|1995875_1996061_+	DUF3113 family protein	NA	W5R8N4	Staphylococcus_phage	100.0	1.4e-27
WP_001140289.1|1996061_1996433_+	hypothetical protein	NA	A7TWN6	Staphylococcus_phage	95.9	4.0e-53
WP_001126846.1|1996433_1996682_+	hypothetical protein	NA	S4V683	Staphylococcus_phage	97.6	8.8e-41
WP_001065109.1|1996696_1996945_+	DUF1024 family protein	NA	A0A2H4PQK1	Staphylococcus_phage	93.9	1.7e-36
WP_000185680.1|1996937_1997474_+	dUTP diphosphatase	NA	A0A1P8L6E0	Staphylococcus_phage	100.0	2.1e-95
WP_000195779.1|1997510_1997717_+	DUF1381 domain-containing protein	NA	A0A1W6JPM8	Staphylococcus_phage	100.0	4.9e-21
WP_000132920.1|1997713_1997908_+	hypothetical protein	NA	S4SX95	Staphylococcus_phage	100.0	7.9e-29
WP_001072795.1|1997904_1998108_+	hypothetical protein	NA	A0A0N9BAX5	Staphylococcus_phage	100.0	5.2e-31
WP_000608273.1|1998100_1998337_+	hypothetical protein	NA	S4SWB7	Staphylococcus_phage	100.0	1.6e-36
WP_010924755.1|1998326_1998713_+	hypothetical protein	NA	Q4ZBS3	Staphylococcus_virus	99.2	1.5e-63
WP_000595245.1|1998712_1998886_+	transcriptional activator RinB	NA	S4SVE4	Staphylococcus_phage	98.2	1.1e-21
WP_000990006.1|1998886_1999033_+	hypothetical protein	NA	Q4ZDN7	Staphylococcus_virus	100.0	1.3e-15
WP_000058632.1|1999047_1999467_+	transcriptional regulator	NA	I1W651	Staphylococcus_phage	100.0	8.1e-71
WP_001838172.1|1999653_2000094_+|terminase	terminase small subunit	terminase	I1W650	Staphylococcus_phage	99.3	2.4e-73
WP_000169948.1|2000080_2001358_+|terminase	PBSX family phage terminase large subunit	terminase	A0EWS5	Staphylococcus_virus	99.8	5.1e-249
WP_000921892.1|2001368_2002904_+|portal	phage portal protein	portal	Q4ZDV9	Staphylococcus_virus	99.4	9.3e-290
WP_001133043.1|2002910_2003906_+|capsid	minor capsid protein	capsid	E0Y3K7	Staphylococcus_virus	100.0	3.4e-184
WP_000072207.1|2003978_2004149_+	hypothetical protein	NA	Q4ZDF2	Staphylococcus_virus	100.0	3.3e-23
WP_000354307.1|2004283_2004898_+	DUF4355 domain-containing protein	NA	A0EWS9	Staphylococcus_virus	100.0	4.9e-40
WP_001114085.1|2005906_2006194_+	hypothetical protein	NA	S4V6D9	Staphylococcus_phage	100.0	4.7e-46
WP_000208960.1|2006202_2006535_+|head,tail	phage head-tail connector protein	head,tail	A0A0F6N3F4	Staphylococcus_phage	100.0	5.5e-54
WP_001268314.1|2006531_2006834_+	hypothetical protein	NA	S4V7K8	Staphylococcus_phage	100.0	1.1e-50
WP_001017814.1|2006833_2007181_+	HK97 gp10 family phage protein	NA	S4V987	Staphylococcus_phage	100.0	3.1e-60
WP_000188649.1|2007192_2007576_+	hypothetical protein	NA	A0A0F6N3L1	Staphylococcus_phage	100.0	1.5e-68
WP_000002577.1|2007594_2008176_+|tail	phage major tail protein, TP901-1 family	tail	A0A0F6N3L8	Staphylococcus_phage	100.0	4.9e-106
WP_001100167.1|2008237_2008603_+|tail	tail assembly chaperone	tail	S4V9M6	Staphylococcus_phage	100.0	2.8e-59
WP_000105584.1|2008632_2008977_+	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
WP_000141453.1|2008993_2012458_+	hypothetical protein	NA	S4V989	Staphylococcus_phage	100.0	5.8e-271
WP_000350686.1|2012470_2013418_+|tail	phage tail family protein	tail	S4V688	Staphylococcus_phage	100.0	3.6e-183
WP_000156404.1|2013426_2015328_+|tail	phage tail protein	tail	Q4ZDD8	Staphylococcus_virus	100.0	0.0e+00
WP_000369014.1|2015342_2017253_+	hypothetical protein	NA	A1KX41	Staphylococcus_virus	99.8	0.0e+00
WP_000259629.1|2017252_2019076_+|plate	BppU family phage baseplate upper protein	plate	W5R8J5	Staphylococcus_phage	99.2	7.4e-294
WP_000705911.1|2019075_2019453_+	DUF2977 domain-containing protein	NA	Q9FZY7	Staphylococcus_virus	99.2	3.4e-60
WP_000782200.1|2019456_2019630_+	XkdX family protein	NA	A0A0F6N3L7	Staphylococcus_phage	100.0	6.6e-27
WP_000466784.1|2019670_2019970_+	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_000524006.1|2020106_2022005_+	glucosaminidase domain-containing protein	NA	Q8SDT1	Staphylococcus_phage	99.8	0.0e+00
WP_000276646.1|2022017_2023256_+|plate	BppU family phage baseplate upper protein	plate	A0A0F6N3G7	Staphylococcus_phage	98.1	2.7e-207
WP_000398870.1|2023261_2023657_+	hypothetical protein	NA	A0A0E3XBL9	Staphylococcus_phage	97.7	1.4e-67
WP_000354127.1|2023712_2024150_+|holin	phage holin	holin	Q8SDS8	Staphylococcus_phage	99.3	6.9e-73
WP_001148136.1|2024130_2025576_+	SH3 domain-containing protein	NA	Q08JW9	Staphylococcus_phage	99.8	1.8e-295
WP_001788502.1|2025818_2025971_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	3.1e-20
WP_001838173.1|2026041_2026152_+	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	97.2	4.9e-12
WP_001286805.1|2026153_2026339_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	100.0	2.7e-26
WP_000221922.1|2026671_2027304_+	DUF4065 domain-containing protein	NA	NA	NA	NA	NA
WP_000543718.1|2027296_2027728_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000274029.1|2028393_2028708_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000582326.1|2029072_2030113_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_000267238.1|2030126_2031194_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_016170465.1|2031447_2031531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000608129.1|2031578_2032427_+	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_000927632.1|2032439_2033267_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_001241246.1|2033293_2034613_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000201875.1|2034696_2035614_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_000598444.1|2035743_2036127_+	YutD family protein	NA	NA	NA	NA	NA
WP_001557163.1|2036332_2037652_+|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
>prophage 146
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2040874	2043543	2878505		Tupanvirus(50.0%)	2	NA	NA
WP_000129659.1|2040874_2042332_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9L3I8	Tupanvirus	28.5	2.6e-39
WP_000613541.1|2042328_2043543_+	PG:teichoic acid D-alanyltransferase DltB	NA	A0A125RNP0	Pseudomonas_phage	26.1	8.5e-20
>prophage 147
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2047586	2051214	2878505		Lake_Baikal_phage(50.0%)	3	NA	NA
WP_001143495.1|2047586_2047946_+	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	38.6	2.7e-14
WP_000046076.1|2048399_2049608_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_001009692.1|2049738_2051214_+	M17 family metallopeptidase	NA	Q6GYZ8	Mycoplasma_phage	34.9	4.5e-47
>prophage 148
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2061134	2068126	2878505		Aureococcus_anophage(33.33%)	6	NA	NA
WP_000035058.1|2061134_2061728_+	peptidylprolyl isomerase	NA	A0A076FI46	Aureococcus_anophage	41.3	1.1e-25
WP_001067294.1|2062142_2062520_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000838029.1|2062881_2064009_+	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_000167314.1|2064316_2065507_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.7	1.3e-33
WP_000138487.1|2065615_2066860_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_000185319.1|2067196_2068126_-	glycerophosphodiester phosphodiesterase	NA	A0A220BYK6	Staphylococcus_phage	37.9	3.7e-39
>prophage 149
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2078280	2081934	2878505		Bacillus_phage(100.0%)	1	NA	NA
WP_000154921.1|2078280_2081934_+	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	24.5	2.0e-24
>prophage 150
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2087053	2093863	2878505		Pseudomonas_phage(33.33%)	4	NA	NA
WP_001044230.1|2087053_2088868_+	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	33.9	6.7e-37
WP_000353954.1|2089070_2091680_+	ATP-dependent chaperone ClpB	NA	A0A223W0B1	Agrobacterium_phage	34.3	5.5e-117
WP_001047069.1|2091738_2092608_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000619360.1|2092717_2093863_+	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	26.0	1.5e-05
>prophage 151
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2102454	2104468	2878505		Planktothrix_phage(50.0%)	2	NA	NA
WP_000140050.1|2102454_2103537_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.8	8.4e-19
WP_000786734.1|2103526_2104468_+	ATP-binding cassette domain-containing protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	26.9	1.6e-05
>prophage 152
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2108119	2165102	2878505	tRNA,protease,bacteriocin	Bacillus_virus(22.22%)	57	NA	NA
WP_001067052.1|2108119_2109106_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.6	1.4e-15
WP_000427767.1|2109108_2110089_+	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	1.3e-15
WP_000915997.1|2110081_2111044_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001180280.1|2111055_2111937_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000448934.1|2111978_2112968_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|2113261_2113657_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217728.1|2114027_2114747_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000959282.1|2114867_2115854_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_000082725.1|2115901_2117710_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
WP_000896697.1|2118169_2118976_-|protease	protease adaptor protein YjbH	protease	NA	NA	NA	NA
WP_000214070.1|2118998_2119364_-	truncated hemoglobin	NA	NA	NA	NA	NA
WP_000224619.1|2119467_2120061_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_001242103.1|2120246_2120594_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077685.1|2120610_2121246_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|2121262_2122072_+	NAD kinase	NA	NA	NA	NA	NA
WP_000669923.1|2122068_2122923_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000062407.1|2122943_2124329_+	magnesium transporter	NA	NA	NA	NA	NA
WP_000395153.1|2124338_2126183_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_000933195.1|2126460_2127231_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933105.1|2127427_2128513_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000570687.1|2128854_2130423_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_001288675.1|2130567_2131326_+	esterase family protein	NA	NA	NA	NA	NA
WP_000600387.1|2131519_2132029_+	YjcG family protein	NA	NA	NA	NA	NA
WP_001154223.1|2132141_2133332_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258645.1|2133309_2134485_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_000340119.1|2134917_2136402_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_001795833.1|2136382_2136643_+	YueH family protein	NA	NA	NA	NA	NA
WP_001049950.1|2136642_2138205_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.7e-36
WP_000928413.1|2138506_2139310_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_001795272.1|2139528_2141853_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000021865.1|2141869_2143228_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414164.1|2143366_2144878_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|2145364_2145934_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876826.1|2146143_2146362_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668818.1|2146442_2147429_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|2147627_2147804_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033865.1|2147818_2148421_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001792055.1|2149336_2149438_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001797239.1|2149447_2149720_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000870831.1|2149763_2151728_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000668627.1|2151730_2152051_+	YxeA family protein	NA	NA	NA	NA	NA
WP_000571167.1|2152047_2152689_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.0	1.7e-19
WP_001795266.1|2152776_2153067_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001792054.1|2153207_2153345_+	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
WP_000766009.1|2153433_2153790_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001081351.1|2154277_2155237_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001790177.1|2155282_2155414_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000867357.1|2155477_2155693_-	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	49.1	1.5e-07
WP_000620949.1|2155857_2156409_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000070966.1|2156460_2157399_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_000190622.1|2157580_2158942_+	isochorismate synthase MenF	NA	NA	NA	NA	NA
WP_000526694.1|2158928_2160602_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_000150197.1|2160588_2161392_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
WP_000184945.1|2161384_2162206_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_000284458.1|2162443_2162773_-	staphostatin B	NA	NA	NA	NA	NA
WP_001089094.1|2162810_2163992_-|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
WP_000676539.1|2164073_2165102_-	Glu-specific serine endopeptidase SspA	NA	A0A2H4PQP7	Staphylococcus_phage	32.3	6.3e-16
>prophage 153
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2168768	2172515	2878505		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001074534.1|2168768_2172515_-	bifunctional autolysin	NA	A0A1J0MFB0	Staphylococcus_phage	37.6	1.1e-54
>prophage 154
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2182969	2197732	2878505		Synechococcus_phage(22.22%)	14	NA	NA
WP_000225836.1|2182969_2183830_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	38.8	4.4e-39
WP_000861572.1|2184030_2184513_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_001010413.1|2184499_2185624_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|2185627_2186332_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|2186331_2186595_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666806.1|2186596_2187268_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032740.1|2187260_2189450_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000483720.1|2189428_2190913_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_000030811.1|2190905_2191934_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000238669.1|2191936_2192503_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
WP_000709277.1|2192517_2193996_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.8	3.2e-77
WP_001101899.1|2194017_2195265_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_000273253.1|2195532_2196339_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000921965.1|2196331_2197732_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.3	1.1e-10
>prophage 155
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2201163	2205543	2878505		Streptococcus_phage(50.0%)	5	NA	NA
WP_000685067.1|2201163_2202336_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	42.8	4.0e-75
WP_000505966.1|2202389_2202932_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000437472.1|2203085_2203352_+	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_000040049.1|2203354_2205073_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_001289618.1|2205309_2205543_-	glutaredoxin-like protein NrdH	NA	G3MBF0	Bacillus_virus	38.7	8.4e-09
>prophage 156
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2211555	2220388	2878505		Synechococcus_phage(25.0%)	9	NA	NA
WP_000957037.1|2211555_2212107_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.0	1.6e-13
WP_000668336.1|2212471_2213098_+	YkyA family protein	NA	NA	NA	NA	NA
WP_000035320.1|2213268_2214381_+	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	A0A0K0KW14	Prochlorococcus_phage	27.8	1.4e-05
WP_000068176.1|2214384_2215362_+	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_000863439.1|2215452_2216745_+	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
WP_000260117.1|2216748_2218155_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.1	1.2e-46
WP_000455597.1|2218322_2218598_+	UPF0223 family protein	NA	NA	NA	NA	NA
WP_001020625.1|2218741_2219281_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000433551.1|2219293_2220388_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	44.3	1.4e-37
>prophage 157
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2228520	2230368	2878505		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000182654.1|2228520_2230368_+	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	26.2	1.8e-21
>prophage 158
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2241885	2244793	2878505		Paramecium_bursaria_Chlorella_virus(50.0%)	5	NA	NA
WP_000757575.1|2241885_2242812_-	glycerophosphodiester phosphodiesterase	NA	M1I1K8	Paramecium_bursaria_Chlorella_virus	26.2	2.2e-12
WP_001049150.1|2243050_2243305_+	YlbG family protein	NA	NA	NA	NA	NA
WP_000814565.1|2243307_2243697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001263796.1|2243766_2244309_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_000401377.1|2244310_2244793_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
>prophage 159
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2256739	2257798	2878505	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000003566.1|2256739_2257798_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
>prophage 160
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2262800	2267358	2878505		Bodo_saltans_virus(33.33%)	3	NA	NA
WP_000161938.1|2262800_2264513_+	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.0	6.8e-15
WP_001249275.1|2264522_2266871_+	endonuclease MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	25.4	3.2e-15
WP_001018928.1|2267043_2267358_+	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
>prophage 161
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2282989	2284949	2878505		Staphylococcus_phage(100.0%)	3	NA	NA
WP_000857488.1|2282989_2283949_-	alpha-hemolysin	NA	A0A2H4PQH7	Staphylococcus_phage	30.3	7.4e-35
WP_000765708.1|2284621_2284768_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001802045.1|2284724_2284949_+	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	71.4	5.6e-18
>prophage 162
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2293965	2294154	2878505		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001245796.1|2293965_2294154_+	hypothetical protein	NA	A0A0K1LL29	Staphylococcus_phage	85.2	2.5e-19
>prophage 163
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2313737	2316491	2878505	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000384691.1|2313737_2316491_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	28.0	3.6e-90
>prophage 164
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2320955	2325566	2878505		Enterobacteria_phage(33.33%)	4	NA	NA
WP_001178619.1|2320955_2322263_+	uracil permease	NA	Q9KX94	Enterobacteria_phage	34.0	3.3e-54
WP_001016166.1|2322290_2323172_+	aspartate carbamoyltransferase catalytic subunit	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	33.9	4.6e-31
WP_000767028.1|2323189_2324464_+	dihydroorotase	NA	NA	NA	NA	NA
WP_001190913.1|2324465_2325566_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.7	5.6e-63
>prophage 165
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2329533	2330145	2878505		Pandoravirus(100.0%)	1	NA	NA
WP_001040248.1|2329533_2330145_+	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	33.8	1.6e-27
>prophage 166
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2333459	2335716	2878505		Abalone_herpesvirus(50.0%)	3	NA	NA
WP_000368226.1|2333459_2334083_+	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.1	1.0e-21
WP_000933956.1|2334082_2334301_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_000722165.1|2334516_2335716_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.9	1.2e-42
>prophage 167
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2340728	2341664	2878505	tRNA	Prochlorococcus_phage(100.0%)	1	NA	NA
WP_000161291.1|2340728_2341664_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	28.0	4.7e-10
>prophage 168
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2344811	2346806	2878505		Moumouvirus(100.0%)	1	NA	NA
WP_000579563.1|2344811_2346806_+	serine/threonine protein kinase Stk1	NA	M1PCM5	Moumouvirus	34.8	5.5e-24
>prophage 169
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2357176	2359426	2878505		Trichoplusia_ni_ascovirus(33.33%)	3	NA	NA
WP_000167269.1|2357176_2357911_+	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.3	3.1e-17
WP_000426914.1|2358345_2358579_+	acyl carrier protein	NA	E3SSM9	Prochlorococcus_phage	63.3	1.6e-07
WP_000043238.1|2358694_2359426_+	ribonuclease III	NA	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	29.2	2.6e-24
>prophage 170
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2372810	2386482	2878505	tRNA,protease	Emiliania_huxleyi_virus(16.67%)	11	NA	NA
WP_000176393.1|2372810_2373578_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	44.1	2.5e-25
WP_001020801.1|2373686_2374853_+	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_000110253.1|2374874_2375783_+	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	33.2	3.0e-17
WP_001041666.1|2376009_2377128_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JQB6	Staphylococcus_phage	61.1	9.5e-50
WP_000672869.1|2377155_2378400_+	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA	NA
WP_000593194.1|2378572_2379445_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_001557331.1|2379618_2381694_+	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	39.2	1.7e-105
WP_000195254.1|2381849_2383157_+|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_001015601.1|2383574_2384471_+	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	31.9	3.6e-31
WP_000072681.1|2384467_2385013_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_000379044.1|2385078_2386482_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IDZ7	Erwinia_phage	25.6	2.9e-27
>prophage 171
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2391261	2392032	2878505		Flavobacterium_phage(100.0%)	1	NA	NA
WP_000473699.1|2391261_2392032_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	41.5	7.3e-25
>prophage 172
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2396305	2408118	2878505	tRNA	Clostridium_phage(33.33%)	9	NA	NA
WP_001801936.1|2396305_2400616_+	DNA polymerase III subunit alpha	NA	A0A0A8WJ41	Clostridium_phage	41.2	3.5e-23
WP_000036633.1|2400905_2401373_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_000097460.1|2401393_2402569_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000727423.1|2402589_2402874_+	YlxR family protein	NA	NA	NA	NA	NA
WP_000020853.1|2402870_2403188_+	YlxQ family RNA-binding protein	NA	NA	NA	NA	NA
WP_000043635.1|2403192_2405310_+	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.1	2.4e-25
WP_000097322.1|2405695_2406046_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_000282298.1|2406214_2407132_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_000864185.1|2407146_2408118_+	riboflavin biosynthesis protein RibF	NA	A0A1V0SJE1	Klosneuvirus	32.1	1.7e-07
>prophage 173
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2413132	2418799	2878505		Mycobacterium_phage(33.33%)	4	NA	NA
WP_000035746.1|2413132_2415499_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	47.7	7.3e-84
WP_001293312.1|2415503_2416217_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000089941.1|2416247_2417513_+	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	26.8	1.2e-40
WP_000664765.1|2417512_2418799_+	insulinase family protein	NA	G3MBJ8	Bacillus_virus	28.4	3.6e-16
>prophage 174
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2422997	2424041	2878505		Bacillus_phage(100.0%)	1	NA	NA
WP_000368166.1|2422997_2424041_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	69.2	9.3e-124
>prophage 175
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2433455	2439937	2878505		Cafeteria_roenbergensis_virus(33.33%)	4	NA	NA
WP_000073352.1|2433455_2436074_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.7	8.5e-41
WP_000516269.1|2436086_2438096_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.0	4.8e-60
WP_001077635.1|2438101_2438644_+	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_001103743.1|2439118_2439937_+	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	2.4e-26
>prophage 176
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2445879	2446356	2878505		Fowlpox_virus(100.0%)	1	NA	NA
WP_000448078.1|2445879_2446356_-	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	38.0	1.2e-22
>prophage 177
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2451425	2454453	2878505		Staphylococcus_phage(100.0%)	5	NA	NA
WP_001793526.1|2451425_2451623_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	50.0	9.9e-11
WP_001795785.1|2452309_2452534_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	72.5	5.0e-19
WP_001002340.1|2452827_2453034_+	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	59.7	1.3e-13
WP_001788716.1|2453733_2453844_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000006110.1|2454267_2454453_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
>prophage 178
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2463854	2464388	2878505		Bacillus_phage(100.0%)	1	NA	NA
WP_000841351.1|2463854_2464388_+	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	43.5	3.4e-21
>prophage 179
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2474526	2480182	2878505		Tupanvirus(25.0%)	6	NA	NA
WP_000082539.1|2474526_2476044_+	catalase	NA	A0A2K9L0T1	Tupanvirus	43.2	2.3e-91
WP_001265708.1|2476134_2476284_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_001085655.1|2476737_2477007_+	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_000688122.1|2477163_2478141_+	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	99.7	8.0e-186
WP_001797872.1|2478162_2479179_+	CAP domain-containing protein	NA	U5Q0C0	Bacillus_phage	41.5	1.1e-15
WP_001208755.1|2479558_2480182_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	63.8	5.9e-17
>prophage 180
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2484332	2485454	2878505		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000691301.1|2484332_2485454_+	exonuclease SbcCD subunit D	NA	A0A1X9I9U0	Staphylococcus_phage	22.7	4.3e-10
>prophage 181
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2489123	2490770	2878505		Vibrio_phage(100.0%)	1	NA	NA
WP_001088978.1|2489123_2490770_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.4	2.5e-22
>prophage 182
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2496761	2501155	2878505		Bacillus_virus(50.0%)	2	NA	NA
WP_001557340.1|2496761_2498753_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	40.5	1.0e-115
WP_001289546.1|2498752_2501155_+	DNA topoisomerase IV subunit A	NA	A0A172JHV7	Bacillus_phage	32.4	1.8e-93
>prophage 183
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2510814	2512077	2878505		Bacillus_phage(100.0%)	1	NA	NA
WP_000283016.1|2510814_2512077_+	Y-family DNA polymerase	NA	O64031	Bacillus_phage	44.3	2.6e-96
>prophage 184
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2516395	2518750	2878505		Acinetobacter_phage(100.0%)	3	NA	NA
WP_000604816.1|2516395_2516962_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	32.1	1.3e-23
WP_000173833.1|2516967_2517966_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	34.9	8.5e-34
WP_000153613.1|2517967_2518750_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	35.9	2.7e-27
>prophage 185
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2526848	2527550	2878505		Tupanvirus(100.0%)	1	NA	NA
WP_000571259.1|2526848_2527550_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	30.3	2.0e-13
>prophage 186
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2530964	2534418	2878505		Streptococcus_phage(50.0%)	3	NA	NA
WP_000077571.1|2530964_2532779_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	47.1	5.1e-154
WP_000974847.1|2532918_2533560_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_000079447.1|2533566_2534418_-	phosphate ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	8.9e-16
>prophage 187
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2539507	2541109	2878505		Klosneuvirus(100.0%)	1	NA	NA
WP_000942303.1|2539507_2541109_+	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	25.7	5.5e-51
>prophage 188
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2549156	2554187	2878505	lysis	Yellowstone_lake_phycodnavirus(33.33%)	7	NA	NA
WP_000216946.1|2549156_2550422_+	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.2	6.2e-13
WP_000876201.1|2550661_2551063_-	sarA expression modulator protein Msa	NA	NA	NA	NA	NA
WP_000809131.1|2551259_2551460_-	cold shock protein CspA	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
WP_000269923.1|2551630_2551939_-	DUF1033 family protein	NA	NA	NA	NA	NA
WP_001215907.1|2552101_2552371_+	acylphosphatase	NA	NA	NA	NA	NA
WP_001788788.1|2552389_2553019_+|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	lysis	NA	NA	NA	NA
WP_000138415.1|2553050_2554187_+	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.3	9.7e-34
>prophage 189
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2557728	2558520	2878505		Halovirus(100.0%)	1	NA	NA
WP_001185421.1|2557728_2558520_-	MoxR family ATPase	NA	R4TG24	Halovirus	34.2	3.3e-12
>prophage 190
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2564685	2566697	2878505		Hokovirus(50.0%)	2	NA	NA
WP_000166801.1|2564685_2566041_-	sensor histidine kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.8	3.5e-14
WP_000192137.1|2566037_2566697_-	response regulator transcription factor ArlR	NA	W8CYM9	Bacillus_phage	33.8	1.1e-34
>prophage 191
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2570106	2579496	2878505		Staphylococcus_phage(60.0%)	13	NA	NA
WP_000342131.1|2570106_2571597_-	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	30.2	2.3e-22
WP_000801007.1|2571788_2572010_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000473653.1|2572009_2572510_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000913317.1|2572521_2572950_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_000159900.1|2572942_2573476_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_000166063.1|2573561_2574401_-	fatty acid kinase FakB2	NA	A0A0N9SI50	Staphylococcus_phage	76.5	1.5e-47
WP_000175746.1|2574415_2574895_-	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	79.9	2.0e-73
WP_000934894.1|2575094_2576051_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	85.2	1.6e-167
WP_000995287.1|2576474_2576912_-	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA	NA
WP_000404649.1|2576927_2578052_-	virulence factor C	NA	NA	NA	NA	NA
WP_000691942.1|2578089_2578341_-	NifU N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_031888515.1|2578352_2578547_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_000282171.1|2578791_2579496_+	queuosine precursor transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	23.8	8.4e-12
>prophage 192
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2618339	2619218	2878505		Bacillus_phage(100.0%)	1	NA	NA
WP_001133021.1|2618339_2619218_-	5'-3' exonuclease	NA	S5M4P0	Bacillus_phage	29.5	1.4e-19
>prophage 193
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2628492	2629170	2878505		Bacillus_phage(100.0%)	1	NA	NA
WP_001795446.1|2628492_2629170_+	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	35.5	1.9e-24
>prophage 194
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2632910	2640416	2878505	tRNA	Temperate_phage(25.0%)	5	NA	NA
WP_000362218.1|2632910_2633597_-	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	32.6	1.2e-07
WP_000858779.1|2633924_2635217_-|tRNA	asparagine--tRNA ligase	tRNA	M1PB22	Moumouvirus	31.3	8.7e-55
WP_000525078.1|2635538_2638232_-	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000049921.1|2638255_2639227_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000361540.1|2639213_2640416_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	4.2e-35
>prophage 195
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2643788	2644364	2878505		Bacillus_virus(100.0%)	1	NA	NA
WP_000005212.1|2643788_2644364_-	YpiB family protein	NA	G3MAV7	Bacillus_virus	27.2	2.1e-08
>prophage 196
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2648026	2653493	2878505		Pandoravirus(25.0%)	7	NA	NA
WP_001269921.1|2648026_2649193_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	31.8	5.8e-34
WP_000789522.1|2649578_2649779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000442480.1|2649987_2650437_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_001096471.1|2650528_2651488_-	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000774684.1|2651489_2652215_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_000450555.1|2652217_2652790_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_001043863.1|2653220_2653493_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
>prophage 197
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2662917	2665596	2878505		Moumouvirus(50.0%)	3	NA	NA
WP_000902099.1|2662917_2664297_-	ATP-dependent DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	33.6	1.4e-55
WP_001163801.1|2664286_2665240_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001151997.1|2665347_2665596_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
>prophage 198
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2670024	2681634	2878505		Staphylococcus_phage(16.67%)	12	NA	NA
WP_001033761.1|2670024_2672187_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	100.0	2.7e-109
WP_001557355.1|2672179_2673106_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000987774.1|2673349_2675101_-	two-component system sensor histidine kinase SrrB	NA	A0A1V0SGX0	Hokovirus	33.2	2.2e-21
WP_000064078.1|2675081_2675807_-	two-component system response regulator SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
WP_000159577.1|2675939_2676677_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000368656.1|2676669_2677212_-	SMC-Scp complex subunit ScpB	NA	NA	NA	NA	NA
WP_000273371.1|2677204_2677936_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	21.8	7.9e-05
WP_001183429.1|2678027_2678534_+	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_000447733.1|2678611_2679499_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.1	5.6e-37
WP_000392691.1|2679547_2679997_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_000365240.1|2680101_2680644_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_001171335.1|2680725_2681634_+	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	32.0	4.4e-05
>prophage 199
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2685161	2686646	2878505		Cyanophage(100.0%)	1	NA	NA
WP_000105070.1|2685161_2686646_+	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	37.8	2.4e-80
>prophage 200
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2693072	2694479	2878505		Synechococcus_phage(100.0%)	1	NA	NA
WP_000193704.1|2693072_2694479_-	NADP-dependent phosphogluconate dehydrogenase	NA	A0A222YX62	Synechococcus_phage	31.1	4.3e-31
>prophage 201
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2701308	2707879	2878505		Indivirus(66.67%)	6	NA	NA
WP_001291533.1|2701308_2702730_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.3	5.1e-40
WP_000942210.1|2702880_2704560_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001124985.1|2704575_2705028_-	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_000183383.1|2705459_2706341_-	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	25.8	2.0e-10
WP_000159865.1|2706318_2706549_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_001286928.1|2706541_2707879_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	37.7	1.6e-43
>prophage 202
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2715379	2718191	2878505		Prochlorococcus_phage(100.0%)	2	NA	NA
WP_000202188.1|2715379_2716852_-	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	NA	E3SN07	Prochlorococcus_phage	41.3	2.8e-81
WP_000019691.1|2716844_2718191_-	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	E3SN07	Prochlorococcus_phage	39.2	1.7e-61
>prophage 203
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2723735	2724359	2878505		Streptococcus_phage(100.0%)	1	NA	NA
WP_001223008.1|2723735_2724359_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	37.1	1.6e-30
>prophage 204
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2730532	2744278	2878505	tRNA	Klosneuvirus(28.57%)	13	NA	NA
WP_000863556.1|2730532_2731132_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	54.7	9.2e-60
WP_001095260.1|2731407_2731818_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_000564315.1|2731804_2732668_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_001213908.1|2732709_2733495_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924220.1|2733620_2734511_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	36.0	3.4e-26
WP_001062176.1|2734520_2735867_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000683940.1|2735980_2737081_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_000624577.1|2737083_2737761_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|2737891_2738998_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217257.1|2739221_2741039_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	7.9e-54
WP_000411298.1|2741099_2741918_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_001797828.1|2741928_2742552_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001030080.1|2742886_2744278_+|tRNA	glycine--tRNA ligase	tRNA	A0A1V0SIF1	Klosneuvirus	27.4	4.7e-46
>prophage 205
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2747331	2748279	2878505		Rhizobium_phage(100.0%)	1	NA	NA
WP_001117767.1|2747331_2748279_-	PhoH family protein	NA	L7TP00	Rhizobium_phage	46.8	6.4e-47
>prophage 206
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2754749	2757857	2878505		Catovirus(50.0%)	2	NA	NA
WP_001119021.1|2754749_2755889_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	25.8	1.2e-26
WP_000034716.1|2756024_2757857_-	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	46.5	4.4e-137
>prophage 207
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2761350	2767514	2878505		Streptococcus_phage(33.33%)	5	NA	NA
WP_000368338.1|2761350_2763174_-	elongation factor 4	NA	A0A1S5SF82	Streptococcus_phage	25.1	6.1e-22
WP_001274017.1|2763519_2763771_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_001282563.1|2763815_2764790_-	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_001557362.1|2764846_2767048_-	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	32.2	1.6e-32
WP_000439693.1|2767052_2767514_-	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.8	3.6e-35
>prophage 208
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2776300	2777521	2878505		Lactococcus_phage(100.0%)	1	NA	NA
WP_000542320.1|2776300_2777521_-	Fic family protein	NA	Q9AZ49	Lactococcus_phage	33.3	2.2e-52
>prophage 209
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2784193	2819807	2878505	tRNA	uncultured_Mediterranean_phage(18.75%)	31	NA	NA
WP_000648617.1|2784193_2784817_-	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.1	2.8e-35
WP_000848304.1|2784816_2786085_-	U32 family peptidase	NA	Q6DW11	Phage_TP	31.7	4.0e-36
WP_000137774.1|2786096_2787020_-	U32 family peptidase	NA	NA	NA	NA	NA
WP_000342258.1|2787022_2787661_-	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	28.8	3.2e-10
WP_000134779.1|2787945_2788254_-	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_000939059.1|2788268_2788697_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_000426912.1|2788700_2788961_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_000734075.1|2789023_2791654_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.4	3.2e-64
WP_001283312.1|2791996_2794474_-	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.0	1.1e-66
WP_000567017.1|2794475_2795144_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_000066096.1|2795838_2796957_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000409157.1|2796957_2798100_-	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	30.8	5.4e-32
WP_000985877.1|2798411_2799431_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000009238.1|2799662_2799809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000752909.1|2799848_2800031_-	CsbD family protein	NA	NA	NA	NA	NA
WP_000704122.1|2800130_2800553_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000102729.1|2800637_2801912_+	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.7	1.4e-105
WP_000682646.1|2802072_2802846_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_001790559.1|2802845_2802974_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000044799.1|2803306_2805073_-|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	27.3	1.3e-16
WP_000590826.1|2805088_2806351_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000717800.1|2806811_2807687_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.7	4.7e-12
WP_000869983.1|2807683_2808136_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_001058580.1|2808147_2810337_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	37.7	6.9e-12
WP_000364542.1|2810764_2811283_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000595011.1|2811304_2813578_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_000749795.1|2813780_2816060_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|2816334_2816595_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|2816613_2817753_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019178.1|2817775_2818801_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005768.1|2818802_2819807_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 210
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2828374	2829106	2878505		Streptococcus_phage(100.0%)	1	NA	NA
WP_001072201.1|2828374_2829106_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
>prophage 211
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2832437	2839084	2878505	tRNA,integrase	Clostridium_phage(50.0%)	4	2825867:2825883	2838097:2838113
2825867:2825883	attL	AATCTTGTTCTTTTAAA	NA	NA	NA	NA
WP_000868132.1|2832437_2833523_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
WP_000261115.1|2834192_2834900_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_001108346.1|2835169_2836441_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_000425350.1|2836453_2839084_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.7	2.8e-153
2838097:2838113	attR	AATCTTGTTCTTTTAAA	NA	NA	NA	NA
>prophage 212
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2848651	2859804	2878505	tRNA,protease	Bacillus_virus(20.0%)	12	NA	NA
WP_000472302.1|2848651_2849914_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.0	5.0e-140
WP_000127573.1|2850064_2851366_-	trigger factor	NA	NA	NA	NA	NA
WP_001790560.1|2851413_2851524_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001280022.1|2851528_2852458_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000032657.1|2852476_2853085_-	NUDIX domain-containing protein	NA	A0A060AB76	Staphylococcus_phage	35.9	6.6e-21
WP_001138360.1|2853226_2853583_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_001125540.1|2853629_2853830_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001791162.1|2853858_2854386_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.1	4.1e-11
WP_000049145.1|2854614_2856108_-	amino acid permease	NA	NA	NA	NA	NA
WP_000435143.1|2856533_2858471_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	35.8	5.0e-115
WP_001790562.1|2858668_2858791_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000808621.1|2858883_2859804_-	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	29.4	8.1e-31
>prophage 213
NZ_CP026958	Staphylococcus aureus strain FDAARGOS_40 chromosome, complete genome	2878505	2863719	2871883	2878505		Bacillus_virus(25.0%)	5	NA	NA
WP_001114454.1|2863719_2864592_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	39.1	2.6e-42
WP_001038317.1|2864607_2867238_-	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	33.0	6.1e-47
WP_000849428.1|2867531_2869019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015445861.1|2869517_2871179_-	HAMP domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	39.4	5.8e-35
WP_000080028.1|2871178_2871883_-	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	28.7	1.6e-07
