The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP006870	Aeromonas hydrophila NJ-35 chromosome, complete genome	5279644	997354	1005258	5279644	protease	Staphylococcus_phage(50.0%)	9	NA	NA
WP_011707102.1|997354_998608_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	53.5	2.3e-100
WP_016351738.1|998691_999171_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016351737.1|999245_999578_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010675395.1|999700_1000150_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_016351736.1|1000246_1001356_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	35.2	2.7e-49
WP_016351735.1|1001410_1002064_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	36.6	7.1e-21
WP_016351734.1|1002205_1003315_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.0	7.9e-65
WP_043158851.1|1003378_1004590_-|protease	serine protease	protease	V5LS29	Emiliania_huxleyi_virus	26.9	8.8e-09
WP_016351731.1|1004787_1005258_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.7	3.5e-30
>prophage 2
NZ_CP006870	Aeromonas hydrophila NJ-35 chromosome, complete genome	5279644	1917964	1981545	5279644	bacteriocin,terminase,portal,integrase	Aeromonas_phage(77.97%)	70	1916046:1916063	1979563:1979580
1916046:1916063	attL	GCCGAGCAGCAGGAGAGC	NA	NA	NA	NA
WP_047234833.1|1917964_1919245_-|integrase	site-specific integrase	integrase	A0A1I9KF78	Aeromonas_phage	61.7	1.6e-146
WP_047234835.1|1919387_1919798_-	hypothetical protein	NA	A0A1I9KG69	Aeromonas_phage	91.9	2.7e-63
WP_138135569.1|1919957_1920149_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138135570.1|1920193_1920901_-	hypothetical protein	NA	A0A1I9KF90	Aeromonas_phage	90.6	8.5e-121
WP_047234837.1|1920976_1921204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047234838.1|1921275_1921494_-	hypothetical protein	NA	A0A1I9KF77	Aeromonas_phage	95.8	2.7e-33
WP_047234840.1|1922581_1923202_-	hypothetical protein	NA	A0A1I9KF82	Aeromonas_phage	60.0	1.6e-51
WP_047234841.1|1923198_1923543_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047234842.1|1923539_1924478_-	recombination-associated protein RdgC	NA	A0A1I9KFB4	Aeromonas_phage	98.7	5.9e-170
WP_043129267.1|1924498_1924678_-	hypothetical protein	NA	A0A1I9KFZ1	Aeromonas_phage	88.1	4.6e-23
WP_047234843.1|1924736_1925339_-	hypothetical protein	NA	H9C0R1	Aeromonas_phage	56.3	1.4e-63
WP_047234844.1|1925475_1926696_-	hypothetical protein	NA	A0A1I9KG78	Aeromonas_phage	80.8	2.6e-178
WP_080962324.1|1926749_1927865_-	hypothetical protein	NA	A0A1I9KFA0	Aeromonas_phage	89.4	1.5e-95
WP_047235040.1|1927910_1928825_-	recombinase RecT	NA	A0A0F6TJP0	Escherichia_coli_O157_typing_phage	53.8	1.5e-77
WP_047234846.1|1928881_1929724_-	exodeoxyribonuclease VIII	NA	A0A1I9KFF5	Aeromonas_phage	71.8	1.1e-122
WP_047234847.1|1929720_1930242_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047234848.1|1930238_1930604_-	hypothetical protein	NA	A0A1I9KFC9	Aeromonas_phage	63.6	9.0e-34
WP_047234849.1|1930600_1930849_-	hypothetical protein	NA	A0A2I7R4L7	Vibrio_phage	53.8	1.8e-09
WP_047234850.1|1930845_1931043_-	hypothetical protein	NA	A0A1I9KG01	Aeromonas_phage	59.7	5.8e-11
WP_052814301.1|1931117_1931804_-	KilA-N domain-containing protein	NA	Q3LZN6	Bacteriophage	39.5	3.9e-14
WP_047234851.1|1932136_1932493_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047234852.1|1932805_1933051_-	hypothetical protein	NA	A0A1I9KF98	Aeromonas_phage	85.2	1.4e-30
WP_052814320.1|1933753_1934338_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_047234854.1|1934504_1934711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047234855.1|1934749_1935139_+	hypothetical protein	NA	A0A1I9KF96	Aeromonas_phage	90.7	5.4e-53
WP_047234856.1|1935142_1935361_+	hypothetical protein	NA	A0A1I9KFG0	Aeromonas_phage	91.7	2.9e-27
WP_080962325.1|1935561_1936716_+	site-specific DNA-methyltransferase	NA	A0A060D598	Salmonella_phage	44.8	7.4e-82
WP_052814302.1|1936778_1937696_+	replication protein	NA	A0A1I9KG10	Aeromonas_phage	61.9	6.3e-100
WP_047234857.1|1937695_1938367_+	hypothetical protein	NA	A0A1I9KFB0	Aeromonas_phage	93.7	1.5e-114
WP_047234858.1|1938353_1938656_+	hypothetical protein	NA	A0A1I9KFB1	Aeromonas_phage	81.0	3.5e-39
WP_047234859.1|1938732_1939026_+	hypothetical protein	NA	A0A1I9KG94	Aeromonas_phage	89.7	2.8e-46
WP_080962327.1|1939022_1939553_+	Rha family transcriptional regulator	NA	A0A2I6PG18	Plesiomonas_phage	57.1	1.8e-43
WP_047234860.1|1939549_1939990_+	recombination protein NinB	NA	A0A1I9KFA6	Aeromonas_phage	93.8	4.4e-75
WP_047234861.1|1939986_1940304_+	hypothetical protein	NA	A0A1I9KFA7	Aeromonas_phage	89.5	3.0e-49
WP_047234862.1|1940431_1940854_+	hypothetical protein	NA	A0A1I9KG18	Aeromonas_phage	86.4	1.9e-67
WP_047234863.1|1940850_1941552_+	hypothetical protein	NA	A0A1I9KFB9	Aeromonas_phage	85.8	3.0e-102
WP_047234865.1|1942867_1944148_-	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	56.9	9.6e-131
WP_047234866.1|1944144_1944567_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	51.6	1.1e-30
WP_047234867.1|1944690_1944885_+	DUF3283 family protein	NA	NA	NA	NA	NA
WP_047234869.1|1945483_1945696_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047234870.1|1945692_1946184_+	lysozyme	NA	A0A193GZ38	Enterobacter_phage	40.2	3.0e-16
WP_047234871.1|1946183_1946732_+	DUF2514 domain-containing protein	NA	A0A2D1GNE2	Pseudomonas_phage	68.3	8.3e-07
WP_047234872.1|1946759_1946939_+	hypothetical protein	NA	A0A1I9KFC1	Aeromonas_phage	50.8	1.1e-08
WP_047234873.1|1946939_1947809_+	hypothetical protein	NA	A0A1I9KFG9	Aeromonas_phage	77.9	8.3e-110
WP_047234874.1|1947842_1948202_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047234875.1|1948260_1949958_+|terminase	terminase	terminase	A0A1I9KFB6	Aeromonas_phage	96.8	0.0e+00
WP_047234876.1|1949957_1952084_+|portal	portal protein	portal	A0A1I9KFF7	Aeromonas_phage	91.9	0.0e+00
WP_052814303.1|1952205_1952541_+	hypothetical protein	NA	A0A1I9KG26	Aeromonas_phage	91.8	8.3e-50
WP_047234877.1|1952672_1953602_+	hypothetical protein	NA	A0A1I9KFD1	Aeromonas_phage	76.3	7.7e-122
WP_047234878.1|1953673_1954891_+	DUF4043 family protein	NA	A0A1I9KFC6	Aeromonas_phage	92.3	1.1e-221
WP_041215985.1|1954956_1955346_+	hypothetical protein	NA	A0A1I9KGB3	Aeromonas_phage	91.5	2.5e-58
WP_041215986.1|1955412_1955853_+	hypothetical protein	NA	A0A1I9KFH0	Aeromonas_phage	78.7	3.6e-53
WP_047234879.1|1955855_1956437_+	hypothetical protein	NA	A0A1I9KFD5	Aeromonas_phage	84.5	3.4e-91
WP_047234880.1|1956446_1957124_+	hypothetical protein	NA	A0A1I9KFD0	Aeromonas_phage	78.2	2.7e-100
WP_138135571.1|1957136_1958864_+	hypothetical protein	NA	A0A1I9KFH7	Aeromonas_phage	77.7	8.3e-61
WP_047235045.1|1959279_1960884_+	hypothetical protein	NA	A0A1I9KFD2	Aeromonas_phage	80.5	1.9e-261
WP_047234883.1|1960883_1964726_+	DUF1983 domain-containing protein	NA	A0A1I9KGC4	Aeromonas_phage	64.0	1.8e-156
WP_135321010.1|1964735_1965092_+	hypothetical protein	NA	A0A1I9KFI0	Aeromonas_phage	73.9	3.1e-47
WP_047234885.1|1965101_1965734_+	hypothetical protein	NA	A0A1I9KFE8	Aeromonas_phage	87.7	4.3e-92
WP_047234886.1|1965744_1966125_+	hypothetical protein	NA	A0A1I9KFD7	Aeromonas_phage	82.3	8.8e-48
WP_041215994.1|1966124_1966385_+|bacteriocin	bacteriocin	bacteriocin	A0A1I9KFI4	Aeromonas_phage	84.6	1.3e-10
WP_047235046.1|1966394_1967795_+	hypothetical protein	NA	A0A1I9KFD9	Aeromonas_phage	76.4	3.9e-194
WP_047234887.1|1967926_1974238_+	hypothetical protein	NA	A0A1I9KFG8	Aeromonas_phage	38.5	4.4e-43
WP_047234888.1|1974316_1974520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138135572.1|1974520_1975201_-	hypothetical protein	NA	A0A1I9KFD1	Aeromonas_phage	42.9	5.5e-08
WP_080962359.1|1975398_1975767_-	Arc family DNA-binding protein	NA	I6R0M0	Salmonella_phage	66.7	3.1e-05
WP_047235047.1|1976187_1976937_+	hypothetical protein	NA	A0A2D0YGX8	Vibrio_phage	41.2	6.0e-40
WP_047234890.1|1977440_1977803_-	transcriptional regulator	NA	A0A1I9KF60	Aeromonas_phage	34.5	1.9e-12
WP_016351077.1|1978573_1979458_+	hypothetical protein	NA	A0A0D4DAV2	Vibrio_phage	26.6	5.1e-14
WP_043119131.1|1979532_1981545_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	39.8	2.6e-29
1979563:1979580	attR	GCTCTCCTGCTGCTCGGC	NA	NA	NA	NA
>prophage 3
NZ_CP006870	Aeromonas hydrophila NJ-35 chromosome, complete genome	5279644	2446422	2461359	5279644	integrase	Aeromonas_phage(75.0%)	20	2444233:2444247	2460333:2460347
2444233:2444247	attL	TCCTGCTCGGTGTAG	NA	NA	NA	NA
WP_016350745.1|2446422_2448975_+	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	36.3	8.8e-43
WP_011706069.1|2449090_2449420_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_052445780.1|2449447_2450728_-|integrase	site-specific integrase	integrase	R9TMP3	Vibrio_phage	31.2	2.0e-43
WP_041218119.1|2451530_2452109_-	phage N-6-adenine-methyltransferase	NA	A0A1I9KF87	Aeromonas_phage	89.1	5.2e-100
WP_043158981.1|2452139_2453228_-	hypothetical protein	NA	A0A1I9KFA0	Aeromonas_phage	87.2	5.5e-87
WP_052445781.1|2453276_2454254_-	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	92.9	1.0e-177
WP_043158982.1|2454250_2455096_-	exodeoxyribonuclease VIII	NA	A0A1I9KFF5	Aeromonas_phage	95.0	5.9e-161
WP_041218121.1|2455092_2455458_-	hypothetical protein	NA	A0A1I9KFC9	Aeromonas_phage	69.4	2.3e-37
WP_041218122.1|2455460_2455682_-	hypothetical protein	NA	A0A1I9KG01	Aeromonas_phage	61.3	1.3e-11
WP_043158983.1|2455939_2456437_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017766129.1|2456433_2456718_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_043158984.1|2456916_2457270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043158985.1|2457579_2457825_-	hypothetical protein	NA	A0A1I9KF98	Aeromonas_phage	82.7	1.5e-29
WP_043158986.1|2458124_2458304_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075384243.1|2458542_2459154_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_043158988.1|2459286_2459505_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043158989.1|2459546_2459936_+	hypothetical protein	NA	A0A1I9KF96	Aeromonas_phage	87.3	3.0e-51
WP_041218129.1|2459940_2460159_+	hypothetical protein	NA	A0A1I9KFG0	Aeromonas_phage	94.4	3.1e-29
WP_017766136.1|2460355_2460601_+	hypothetical protein	NA	NA	NA	NA	NA
2460333:2460347	attR	CTACACCGAGCAGGA	NA	NA	NA	NA
WP_043158990.1|2460597_2461359_+	helix-turn-helix domain-containing protein	NA	Q8HA96	Salmonella_phage	76.9	9.4e-33
>prophage 4
NZ_CP006870	Aeromonas hydrophila NJ-35 chromosome, complete genome	5279644	2468938	2503645	5279644	terminase	Aeromonas_phage(83.33%)	41	NA	NA
WP_043158995.1|2468938_2469454_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	53.1	7.2e-45
WP_138135592.1|2469443_2470337_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_043158996.1|2470770_2471391_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052445783.1|2471556_2472171_+	Rha family transcriptional regulator	NA	A0A2I6PG18	Plesiomonas_phage	49.4	3.9e-37
WP_043158997.1|2472167_2472608_+	recombination protein NinB	NA	A0A1I9KFA6	Aeromonas_phage	95.1	3.7e-74
WP_043158999.1|2472604_2473027_+	hypothetical protein	NA	A0A1I9KG18	Aeromonas_phage	81.4	5.7e-64
WP_043159000.1|2473023_2473725_+	hypothetical protein	NA	A0A1I9KFB9	Aeromonas_phage	85.4	4.6e-103
WP_043159001.1|2473792_2474551_-	cytolytic delta-endotoxin (insecticidal protein)	NA	NA	NA	NA	NA
WP_043159002.1|2475073_2476354_-	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	56.1	3.4e-128
WP_041215973.1|2476350_2476773_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	51.6	8.3e-31
WP_043159003.1|2476931_2477348_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043159207.1|2477347_2477542_+	DUF3283 family protein	NA	NA	NA	NA	NA
WP_138135574.1|2477744_2478014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043159208.1|2477976_2478387_+	H-NS histone family protein	NA	NA	NA	NA	NA
WP_080765138.1|2478535_2479003_+	type VI secretion system PAAR protein	NA	E3SST2	Prochlorococcus_phage	46.6	4.6e-06
WP_052445785.1|2479013_2479991_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075384247.1|2479990_2480485_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138135575.1|2480633_2481176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043159004.1|2481288_2481606_+	hypothetical protein	NA	A0A1I9KFB8	Aeromonas_phage	95.2	1.4e-51
WP_043159005.1|2481605_2482085_+	TIGR02594 family protein	NA	A0A1I9KGA3	Aeromonas_phage	97.4	1.0e-85
WP_042880547.1|2482140_2482365_+	hypothetical protein	NA	A0A1I9KFG6	Aeromonas_phage	100.0	1.7e-30
WP_043159006.1|2482366_2482597_+	hypothetical protein	NA	A0A1I9KFC5	Aeromonas_phage	82.9	1.4e-27
WP_043159008.1|2482644_2482830_+	hypothetical protein	NA	A0A1I9KFC1	Aeromonas_phage	86.9	3.1e-22
WP_043159010.1|2482830_2483721_+	hypothetical protein	NA	A0A1I9KFG9	Aeromonas_phage	76.1	6.5e-102
WP_138135576.1|2483756_2484419_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043159011.1|2484474_2486172_+|terminase	terminase	terminase	A0A1I9KFB6	Aeromonas_phage	95.9	0.0e+00
WP_043159013.1|2486171_2488298_+	OmpH family outer membrane protein	NA	A0A1I9KFF7	Aeromonas_phage	95.5	0.0e+00
WP_043159014.1|2488593_2489532_+	hypothetical protein	NA	A0A1I9KFD1	Aeromonas_phage	87.8	5.8e-141
WP_043159016.1|2489603_2490821_+	DUF4043 family protein	NA	A0A1I9KFC6	Aeromonas_phage	92.3	6.2e-220
WP_043159019.1|2490884_2491274_+	hypothetical protein	NA	A0A1I9KGB3	Aeromonas_phage	90.7	2.5e-58
WP_043159020.1|2491335_2491776_+	hypothetical protein	NA	A0A1I9KFH0	Aeromonas_phage	81.6	8.3e-50
WP_043159023.1|2491778_2492360_+	hypothetical protein	NA	A0A1I9KFD5	Aeromonas_phage	85.5	1.0e-92
WP_043159025.1|2492369_2493047_+	hypothetical protein	NA	A0A1I9KFD0	Aeromonas_phage	78.2	2.7e-100
WP_043159026.1|2493059_2494697_+	hypothetical protein	NA	A0A1I9KFH7	Aeromonas_phage	77.7	1.3e-60
WP_043159214.1|2495112_2496717_+	hypothetical protein	NA	A0A1I9KFD2	Aeromonas_phage	82.4	1.1e-269
WP_118836324.1|2498906_2500607_+	DUF1983 domain-containing protein	NA	A0A1I9KGC4	Aeromonas_phage	53.6	5.6e-70
WP_043159031.1|2500603_2500963_+	hypothetical protein	NA	A0A1I9KFI0	Aeromonas_phage	75.6	5.2e-50
WP_043159033.1|2500972_2501605_+	hypothetical protein	NA	A0A1I9KFE8	Aeromonas_phage	85.4	9.0e-90
WP_043159035.1|2501615_2501996_+	hypothetical protein	NA	A0A1I9KFD7	Aeromonas_phage	83.1	2.3e-48
WP_043159036.1|2501995_2502235_+	hypothetical protein	NA	A0A1I9KFI4	Aeromonas_phage	63.5	1.7e-17
WP_043159037.1|2502244_2503645_+	hypothetical protein	NA	A0A1I9KFD9	Aeromonas_phage	71.0	1.7e-181
>prophage 5
NZ_CP006870	Aeromonas hydrophila NJ-35 chromosome, complete genome	5279644	2632784	2649263	5279644	tRNA	Hokovirus(12.5%)	11	NA	NA
WP_016350665.1|2632784_2636744_-	transporter substrate-binding domain-containing protein	NA	A0A1V0SGX0	Hokovirus	36.8	2.6e-33
WP_005300715.1|2636798_2637095_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	35.6	3.0e-11
WP_016350664.1|2637098_2639486_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	24.5	1.8e-05
WP_016350663.1|2639498_2640482_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	44.0	1.5e-35
WP_005300683.1|2640797_2641154_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_005300673.1|2641169_2641367_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_075384255.1|2641453_2642002_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	37.9	4.9e-15
WP_016350661.1|2642005_2643934_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.9	2.8e-126
WP_016350660.1|2644170_2644758_-	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_016350659.1|2644932_2645988_+	PA0069 family radical SAM protein	NA	A0A1C9EG97	Acidianus_two-tailed_virus	28.6	2.4e-10
WP_011706172.1|2646515_2649263_-	DNA topoisomerase (ATP-hydrolyzing) subunit A	NA	G3M9Z5	Bacillus_virus	34.9	1.3e-108
>prophage 6
NZ_CP006870	Aeromonas hydrophila NJ-35 chromosome, complete genome	5279644	2920130	2965360	5279644	tRNA,bacteriocin,protease,plate	uncultured_Mediterranean_phage(14.29%)	36	NA	NA
WP_016350462.1|2920130_2920889_-|tRNA	tRNA-(ms[2]io[6]A)-hydroxylase	tRNA	NA	NA	NA	NA
WP_016350461.1|2921073_2922594_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	42.6	1.4e-88
WP_011705745.1|2922615_2923104_-|bacteriocin	bacteriocin production protein	bacteriocin	NA	NA	NA	NA
WP_016350460.1|2923290_2924586_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	49.9	5.2e-92
WP_043119634.1|2924925_2926269_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	41.7	4.0e-79
WP_043119633.1|2926413_2927022_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_043118961.1|2927098_2929621_-	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	48.4	4.7e-89
WP_047234899.1|2929822_2930314_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA	NA
WP_075384527.1|2930463_2930694_+	alanine dehydrogenase	NA	NA	NA	NA	NA
WP_016350456.1|2931294_2932245_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.5	2.4e-62
WP_016350455.1|2932302_2933550_+	response regulator	NA	A0A127AWB9	Bacillus_phage	32.2	6.5e-15
WP_016350454.1|2933660_2934131_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_016350453.1|2934150_2934858_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_011705735.1|2934854_2935571_+	arginyltransferase	NA	NA	NA	NA	NA
WP_005300033.1|2935640_2935859_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_016350452.1|2935923_2938176_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	43.7	2.0e-168
WP_005300028.1|2938235_2938553_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	49.4	2.4e-14
WP_005300025.1|2938781_2939000_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	63.2	1.2e-17
WP_016350451.1|2939106_2939970_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	31.2	1.8e-27
WP_059296255.1|2940867_2941377_-	hypothetical protein	NA	NA	NA	NA	NA
WP_134984286.1|2941664_2942063_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155398508.1|2942068_2944759_-	glycoside hydrolase family 19 protein	NA	A0A2H4JHX4	uncultured_Caudovirales_phage	32.8	9.1e-06
WP_043159061.1|2944799_2946848_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	27.1	6.0e-34
WP_017411057.1|2946858_2947146_-	type VI secretion system PAAR protein	NA	G4KK81	Yersinia_phage	39.4	2.3e-08
WP_043159063.1|2947403_2948834_-	membrane protein	NA	NA	NA	NA	NA
WP_043159065.1|2948880_2952366_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_043159066.1|2952407_2953853_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_043159068.1|2953861_2954467_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
WP_043159070.1|2954466_2956005_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_043159072.1|2956007_2958650_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	32.8	2.8e-92
WP_010634228.1|2958670_2959450_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_029301183.1|2959472_2960807_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_011705718.1|2960809_2961325_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_043159074.1|2961324_2962575_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_017411067.1|2962631_2963630_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_043159076.1|2963593_2965360_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
>prophage 7
NZ_CP006870	Aeromonas hydrophila NJ-35 chromosome, complete genome	5279644	3420544	3431617	5279644	head	Shigella_phage(50.0%)	16	NA	NA
WP_016350132.1|3420544_3420958_-	DUF1320 family protein	NA	B7SDP4	Haemophilus_phage	36.4	1.3e-15
WP_016350131.1|3420959_3421409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016350130.1|3421512_3422421_-|head	phage head protein	head	A0A0C4UQR9	Shigella_phage	57.2	7.4e-101
WP_016350129.1|3422465_3423614_-	hypothetical protein	NA	A0A0C4UQU6	Shigella_phage	43.5	2.1e-68
WP_016350128.1|3423836_3424283_-	phage virion morphogenesis protein	NA	Q5ZQY1	Pseudomonas_phage	32.9	4.8e-13
WP_016350127.1|3424282_3424483_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016350126.1|3424502_3425972_-	hypothetical protein	NA	A0A2H4IYU7	uncultured_Caudovirales_phage	52.7	1.5e-63
WP_016350125.1|3425971_3427561_-	DUF935 domain-containing protein	NA	J9SVY0	Pseudomonas_phage	48.4	2.1e-119
WP_016350124.1|3427560_3429114_-	hypothetical protein	NA	A0A0C4UR29	Shigella_phage	58.4	5.7e-162
WP_016350123.1|3429113_3429689_-	DUF3486 family protein	NA	A0A0C4UQU5	Shigella_phage	68.9	3.6e-61
WP_005345917.1|3429691_3429988_-	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	57.0	6.2e-17
WP_016350122.1|3429984_3430299_-	DUF2730 family protein	NA	NA	NA	NA	NA
WP_016350121.1|3430279_3430507_-	DnaK suppressor protein	NA	NA	NA	NA	NA
WP_005353373.1|3430528_3430750_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016350120.1|3430742_3431045_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043118779.1|3431041_3431617_-	secretion activator protein	NA	B0ZSJ3	Halomonas_phage	30.4	3.7e-13
>prophage 8
NZ_CP006870	Aeromonas hydrophila NJ-35 chromosome, complete genome	5279644	4034137	4090828	5279644	tail,terminase,portal,capsid,head,protease	Klebsiella_phage(17.65%)	51	NA	NA
WP_016349705.1|4034137_4036516_-|protease	metalloprotease	protease	NA	NA	NA	NA
WP_016349704.1|4036588_4039198_-	chitinase	NA	A0A097P8Z3	Sucra_jujuba_nucleopolyhedrovirus	60.4	2.6e-199
WP_016349703.1|4039570_4043071_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_016349702.1|4043287_4043899_+	DUF2975 domain-containing protein	NA	NA	NA	NA	NA
WP_011704909.1|4043906_4044116_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_016349701.1|4044221_4045361_-	3-phenylpropionate MFS transporter	NA	NA	NA	NA	NA
WP_016349700.1|4045649_4047743_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_016349699.1|4047931_4048900_+	ChaN family lipoprotein	NA	NA	NA	NA	NA
WP_016349698.1|4048960_4049512_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_016349697.1|4049551_4049956_+	lipoprotein	NA	NA	NA	NA	NA
WP_010634920.1|4050025_4050583_-	heme utilization protein HutZ	NA	NA	NA	NA	NA
WP_011704903.1|4050579_4051092_-	heme utilization cystosolic carrier protein HutX	NA	NA	NA	NA	NA
WP_016349696.1|4051260_4052100_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_016349695.1|4052096_4053128_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_016349694.1|4053142_4053931_+	heme ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	27.8	7.7e-14
WP_011704899.1|4054043_4054670_-	YitT family protein	NA	NA	NA	NA	NA
WP_016349693.1|4054991_4056005_+	NAD-dependent epimerase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	28.0	8.1e-32
WP_016349692.1|4056010_4056922_-	EamA family transporter	NA	NA	NA	NA	NA
WP_016349691.1|4056978_4057782_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_043118603.1|4057844_4059104_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA	NA
WP_016349689.1|4059129_4059957_-	xanthosine phosphorylase	NA	NA	NA	NA	NA
WP_016349688.1|4060287_4061226_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011704892.1|4061381_4061570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011704890.1|4062132_4062987_+	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	46.7	2.4e-21
WP_016349686.1|4063095_4063932_+	MTA/SAH nucleosidase	NA	NA	NA	NA	NA
WP_043118598.1|4064022_4064532_-	YgjV family protein	NA	NA	NA	NA	NA
WP_016349684.1|4064589_4065165_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_016349683.1|4065890_4066115_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349681.1|4068074_4068479_-	hypothetical protein	NA	A0A0M3VI90	Ralstonia_phage	42.2	1.8e-14
WP_016349680.1|4068481_4070062_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349679.1|4070065_4071265_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043159139.1|4071304_4074898_-	hypothetical protein	NA	A0A0M4U447	Ralstonia_phage	43.2	1.5e-277
WP_016349677.1|4074894_4075278_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349676.1|4075277_4078850_-	tape measure protein	NA	A0A2I7S9D9	Vibrio_phage	34.5	1.6e-34
WP_134984435.1|4078915_4079464_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349675.1|4079819_4080569_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349674.1|4080608_4081031_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349673.1|4081027_4081585_-	hypothetical protein	NA	NA	NA	NA	NA
WP_118836289.1|4081584_4082124_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349671.1|4082132_4082444_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4J8C5	uncultured_Caudovirales_phage	43.2	2.8e-12
WP_016349670.1|4082446_4082902_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349669.1|4082973_4084260_-|capsid	phage major capsid protein	capsid	Q6UAX6	Klebsiella_phage	62.4	1.4e-142
WP_016349668.1|4084328_4085264_-	S49 family peptidase	NA	Q6UAX7	Klebsiella_phage	50.8	2.5e-80
WP_016349667.1|4085251_4086505_-|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	62.1	1.7e-151
WP_016349666.1|4086504_4086693_-	hypothetical protein	NA	A0A1B5FP99	Escherichia_phage	65.8	4.5e-05
WP_016349665.1|4086686_4088408_-|terminase	terminase large subunit	terminase	U5P0Q5	Shigella_phage	74.2	7.1e-254
WP_043118588.1|4088417_4088903_-|terminase	phage terminase small subunit P27 family	terminase	A0A2D1GNP3	Pseudomonas_phage	59.5	1.1e-47
WP_043119580.1|4088998_4089379_-	HNH endonuclease	NA	A0A1V0E8A5	Vibrio_phage	53.0	2.4e-29
WP_016349662.1|4089462_4089747_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_016349661.1|4089797_4090337_-	DUF2514 family protein	NA	A0A059VF51	Pseudomonas_phage	39.5	9.0e-14
WP_016349660.1|4090336_4090828_-	lysozyme	NA	D6QWN8	uncultured_phage	38.1	4.4e-15
>prophage 9
NZ_CP006870	Aeromonas hydrophila NJ-35 chromosome, complete genome	5279644	4104687	4113666	5279644		Enterobacteria_phage(33.33%)	14	NA	NA
WP_075384563.1|4104687_4105056_-	DUF1064 domain-containing protein	NA	Q3HQZ9	Burkholderia_phage	48.8	2.7e-25
WP_016349649.1|4105061_4106051_-	DUF968 domain-containing protein	NA	A0A1V0E819	Vibrio_phage	31.0	2.1e-32
WP_016349648.1|4106047_4106311_-	hypothetical protein	NA	NA	NA	NA	NA
WP_134984434.1|4106378_4106855_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349647.1|4107054_4107450_-	DUF4406 domain-containing protein	NA	A0A1B0YZW9	Pseudomonas_phage	35.8	4.4e-10
WP_016349646.1|4107439_4107922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349644.1|4108136_4108835_-	hypothetical protein	NA	A0A1I9KFA9	Aeromonas_phage	63.6	1.0e-78
WP_016349643.1|4108851_4109106_-	hypothetical protein	NA	A0A1I9KFB1	Aeromonas_phage	46.8	6.8e-12
WP_043159231.1|4109105_4109486_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349641.1|4109574_4110696_-	hypothetical protein	NA	A5VW95	Enterobacteria_phage	32.4	1.5e-15
WP_016349640.1|4110818_4111775_-	phage regulatory protein, Rha family	NA	A0A1C9IHV9	Salmonella_phage	41.5	2.1e-45
WP_016349639.1|4112169_4112667_-	Lambda phage phage regulatory protein CII	NA	NA	NA	NA	NA
WP_016349638.1|4112685_4112892_-	helix-turn-helix transcriptional regulator	NA	K7PKH4	Enterobacteria_phage	57.4	1.4e-15
WP_043118571.1|4112994_4113666_+	helix-turn-helix domain-containing protein	NA	K7PH19	Enterobacteria_phage	44.0	1.9e-37
>prophage 10
NZ_CP006870	Aeromonas hydrophila NJ-35 chromosome, complete genome	5279644	4253115	4263050	5279644	tRNA	uncultured_Mediterranean_phage(28.57%)	9	NA	NA
WP_073348937.1|4253115_4254981_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	32.6	1.1e-34
WP_016349544.1|4255194_4256982_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.1	5.2e-74
WP_016349543.1|4257070_4257514_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	48.6	1.7e-26
WP_005309452.1|4257529_4257745_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_016349542.1|4257924_4258938_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.3	6.9e-108
WP_011704778.1|4259022_4260006_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.1	1.7e-34
WP_016349540.1|4261103_4261685_-	DedA family protein	NA	NA	NA	NA	NA
WP_016349539.1|4261681_4262299_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.4	5.3e-34
WP_016349538.1|4262303_4263050_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.7	2.1e-69
>prophage 11
NZ_CP006870	Aeromonas hydrophila NJ-35 chromosome, complete genome	5279644	5203021	5244006	5279644	transposase,integrase	Brazilian_cedratvirus(33.33%)	34	5224911:5224927	5244705:5244721
WP_047235026.1|5203021_5204026_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJ76	Virus_Rctr85	36.3	7.7e-43
WP_047235027.1|5204028_5204559_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047235028.1|5204906_5205548_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080962355.1|5205544_5206390_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047235029.1|5206874_5207423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047235030.1|5207440_5208166_-	hypothetical protein	NA	NA	NA	NA	NA
WP_118836319.1|5209273_5210477_+|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	69.8	1.5e-112
WP_047235032.1|5210827_5211076_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047235075.1|5211408_5213115_-	DNA primase	NA	A0A0H5AWB1	Pseudomonas_phage	34.3	1.0e-18
WP_047235034.1|5213293_5213680_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047235035.1|5213938_5214799_-	hypothetical protein	NA	A0A219UQS0	Bacillus_phage	29.0	1.3e-09
WP_138135590.1|5214868_5215090_-	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_138135593.1|5215095_5215329_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047235037.1|5215366_5215558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047235038.1|5215678_5215876_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047234945.1|5216336_5217464_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_047234947.1|5221616_5223740_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_047234948.1|5223855_5224470_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA	NA
WP_017679329.1|5224469_5225234_-	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	35.0	3.6e-16
5224911:5224927	attL	GGCGGCGGCGCTCAGGT	NA	NA	NA	NA
WP_047234949.1|5225226_5226039_-	carbon-phosphorus lyase complex subunit PhnJ	NA	NA	NA	NA	NA
WP_047234950.1|5226035_5227082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047234951.1|5227081_5227648_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017679333.1|5227644_5228082_-	phosphonate C-P lyase system protein PhnG	NA	NA	NA	NA	NA
WP_017679334.1|5228087_5228606_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047234952.1|5228602_5229457_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.4	1.7e-11
WP_080962340.1|5229456_5230506_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_047234953.1|5230502_5231606_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047235055.1|5231806_5232424_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047234954.1|5233341_5234253_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_047234955.1|5235946_5236177_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_080962341.1|5237921_5239442_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_047234956.1|5239446_5241105_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_047234957.1|5241101_5243195_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_047234958.1|5243178_5244006_-|transposase	heteromeric transposase endonuclease subunit TnsA	transposase	NA	NA	NA	NA
5244705:5244721	attR	GGCGGCGGCGCTCAGGT	NA	NA	NA	NA
