assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001021085.1_ASM102108v1	NZ_CP004021	Candidatus Liberibacter africanus PTSAPSY chromosome, complete genome	1	63355-63449	1	CRISPRCasFinder	no		cas3,DEDDh	Orphan	AATAATGAACCTGCAAATCCAGC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh	NA|248aa|up_9|NZ_CP004021.1_46611_47355_-,NA|77aa|up_7|NZ_CP004021.1_49515_49746_+,NA|67aa|up_6|NZ_CP004021.1_50287_50488_+,NA|114aa|up_3|NZ_CP004021.1_53008_53350_-,NA|298aa|down_0|NZ_CP004021.1_63986_64880_+,NA|46aa|down_1|NZ_CP004021.1_65860_65998_-	NA|248aa|up_9|NZ_CP004021.1_46611_47355_-	NA	NA|178aa|up_8|NZ_CP004021.1_47613_48147_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|77aa|up_7|NZ_CP004021.1_49515_49746_+	NA	NA|67aa|up_6|NZ_CP004021.1_50287_50488_+	NA	NA|294aa|up_5|NZ_CP004021.1_50588_51470_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|308aa|up_4|NZ_CP004021.1_51521_52445_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|114aa|up_3|NZ_CP004021.1_53008_53350_-	NA	NA|922aa|up_2|NZ_CP004021.1_54145_56911_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|160aa|up_1|NZ_CP004021.1_57005_57485_-	PRK06341, PRK06341, single-stranded DNA-binding protein; Provisional	NA|459aa|up_0|NZ_CP004021.1_61026_62403_+	PRK09469, glnA, glutamate--ammonia ligase	NA|298aa|down_0|NZ_CP004021.1_63986_64880_+	NA	NA|46aa|down_1|NZ_CP004021.1_65860_65998_-	NA	NA|312aa|down_2|NZ_CP004021.1_66323_67259_-	PRK00971, PRK00971, glutaminase; Provisional	NA|207aa|down_3|NZ_CP004021.1_67292_67913_-	PRK05327, rpsD, 30S ribosomal protein S4; Validated	NA|269aa|down_4|NZ_CP004021.1_68299_69106_-	PRK00865, PRK00865, glutamate racemase; Provisional	NA|269aa|down_5|NZ_CP004021.1_69110_69917_-	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|771aa|down_6|NZ_CP004021.1_70159_72472_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|407aa|down_7|NZ_CP004021.1_72640_73861_+	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|558aa|down_8|NZ_CP004021.1_73867_75541_-	PRK05380, pyrG, CTP synthetase; Validated	NA|143aa|down_9|NZ_CP004021.1_75631_76060_-	PRK06870, secG, preprotein translocase subunit SecG; Reviewed
GCF_001021085.1_ASM102108v1	NZ_CP004021	Candidatus Liberibacter africanus PTSAPSY chromosome, complete genome	2	1112590-1112684	2	CRISPRCasFinder	no		cas3,DEDDh	Orphan	AAGCTTGAATTGGCGAAGATCAATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh	NA|50aa|up_5|NZ_CP004021.1_1106239_1106389_-,NA|60aa|up_4|NZ_CP004021.1_1106388_1106568_-,NA|89aa|up_2|NZ_CP004021.1_1108006_1108273_+,NA|92aa|up_1|NZ_CP004021.1_1108699_1108975_-,NA|56aa|up_0|NZ_CP004021.1_1109969_1110137_-,NA|57aa|down_0|NZ_CP004021.1_1113054_1113225_-,NA|62aa|down_1|NZ_CP004021.1_1114550_1114736_-,NA|238aa|down_5|NZ_CP004021.1_1120277_1120991_-,NA|51aa|down_8|NZ_CP004021.1_1123478_1123631_-	NA|298aa|up_9|NZ_CP004021.1_1101943_1102837_+	cd03405, SPFH_HflC, High frequency of lysogenization C (HflC) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|298aa|up_8|NZ_CP004021.1_1103007_1103901_-	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|302aa|up_7|NZ_CP004021.1_1103905_1104811_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|200aa|up_6|NZ_CP004021.1_1105083_1105683_+	pfam05951, Peptidase_M15_2, Bacterial protein of unknown function (DUF882)	NA|50aa|up_5|NZ_CP004021.1_1106239_1106389_-	NA	NA|60aa|up_4|NZ_CP004021.1_1106388_1106568_-	NA	NA|205aa|up_3|NZ_CP004021.1_1106738_1107353_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|89aa|up_2|NZ_CP004021.1_1108006_1108273_+	NA	NA|92aa|up_1|NZ_CP004021.1_1108699_1108975_-	NA	NA|56aa|up_0|NZ_CP004021.1_1109969_1110137_-	NA	NA|57aa|down_0|NZ_CP004021.1_1113054_1113225_-	NA	NA|62aa|down_1|NZ_CP004021.1_1114550_1114736_-	NA	NA|187aa|down_2|NZ_CP004021.1_1115193_1115754_-	pfam18160, SLATT_5, SMODS and SLOG-associating 2TM effector domain family 5	NA|228aa|down_3|NZ_CP004021.1_1117776_1118460_+	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|219aa|down_4|NZ_CP004021.1_1119504_1120161_+	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like	NA|238aa|down_5|NZ_CP004021.1_1120277_1120991_-	NA	NA|263aa|down_6|NZ_CP004021.1_1121211_1122000_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|86aa|down_7|NZ_CP004021.1_1122062_1122320_-	PRK13694, PRK13694, hypothetical protein; Provisional	NA|51aa|down_8|NZ_CP004021.1_1123478_1123631_-	NA	NA|91aa|down_9|NZ_CP004021.1_1123851_1124124_-	PHA00330, PHA00330, putative replication initiation protein
GCF_001021085.1_ASM102108v1	NZ_CP004021	Candidatus Liberibacter africanus PTSAPSY chromosome, complete genome	3	1190479-1190594	3	CRISPRCasFinder	no	cas3	cas3,DEDDh	Unclear	TTTTTGCTGTTCATATTTAGCTTCTTTCTTTG	32	0	0	NA	NA	NA	1	1	Unclear	cas3,DEDDh	NA,NA|54aa|down_0|NZ_CP004021.1_1191200_1191362_+,NA|50aa|down_1|NZ_CP004021.1_1191869_1192019_+	NA|231aa|up_9|NZ_CP004021.1_1179979_1180672_-	COG2928, COG2928, Uncharacterized conserved protein [Function unknown]	NA|609aa|up_8|NZ_CP004021.1_1180727_1182554_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|443aa|up_7|NZ_CP004021.1_1182641_1183970_-	PRK14353, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA|307aa|up_6|NZ_CP004021.1_1184098_1185019_-	PRK00089, era, GTPase Era; Reviewed	NA|228aa|up_5|NZ_CP004021.1_1185031_1185715_-	PRK12371, PRK12371, ribonuclease III; Reviewed	NA|251aa|up_4|NZ_CP004021.1_1185714_1186467_-	PRK10861, PRK10861, signal peptidase I	NA|133aa|up_3|NZ_CP004021.1_1186543_1186942_-	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional	NA|124aa|up_2|NZ_CP004021.1_1187123_1187495_-	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed	NA|190aa|up_1|NZ_CP004021.1_1187773_1188343_+	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins	NA|256aa|up_0|NZ_CP004021.1_1188634_1189402_-	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane]	NA|54aa|down_0|NZ_CP004021.1_1191200_1191362_+	NA	NA|50aa|down_1|NZ_CP004021.1_1191869_1192019_+	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
