The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP007810	Xanthomonas oryzae pv. oryzicola strain YM15, complete genome	4430829	2186553	2244124	4430829	plate,transposase	Xanthomonas_phage(50.0%)	40	NA	NA
WP_047340494.1|2186553_2187543_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.8	2.7e-96
WP_075240059.1|2188297_2188558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075240058.1|2189201_2189603_-	DUF4124 domain-containing protein	NA	A0A077JCA3	Xanthomonas_phage	64.3	3.9e-38
WP_080344434.1|2189666_2189837_-	hypothetical protein	NA	A0A1D6ZIU7	Xanthomonas_phage	56.0	5.5e-10
WP_047339855.1|2189891_2191076_-	zonular occludens toxin family protein	NA	A0A1W6DXR3	Xanthomonas_phage	37.6	6.1e-55
WP_047339856.1|2191072_2191393_-	DUF2523 domain-containing protein	NA	NA	NA	NA	NA
WP_047339857.1|2191394_2192858_-	hypothetical protein	NA	A0A1D6ZIU5	Xanthomonas_phage	40.6	1.9e-50
WP_011408495.1|2192994_2193234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047339859.1|2193474_2193768_-	single-stranded DNA-binding protein	NA	S0F3B2	Stenotrophomonas_phage	53.1	9.2e-21
WP_047340495.1|2193764_2194871_-	replication initiation factor domain-containing protein	NA	S0F3I3	Stenotrophomonas_phage	74.3	1.1e-159
WP_047339860.1|2194918_2195155_-	hypothetical protein	NA	A0A1W6DXK4	Xanthomonas_phage	93.2	1.4e-27
WP_047339861.1|2195154_2195340_-	hypothetical protein	NA	A0A1W6DXV6	Xanthomonas_phage	98.4	5.4e-27
WP_014503420.1|2198189_2201315_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014503421.1|2201366_2202479_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_024712362.1|2202603_2203182_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_047339863.1|2204671_2206759_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047339864.1|2207134_2208226_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_047339865.1|2208632_2211713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033004902.1|2214610_2215318_+	response regulator	NA	NA	NA	NA	NA
WP_014503433.1|2215314_2216307_+	c-type cytochrome	NA	NA	NA	NA	NA
WP_047339868.1|2216303_2218763_+	two-component system VirA-like sensor kinase	NA	NA	NA	NA	NA
WP_047339869.1|2218876_2219857_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_047339870.1|2219865_2220894_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_044750447.1|2221066_2221393_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047339871.1|2221389_2224293_-	protein kinase	NA	A0A2R8FF19	Brazilian_cedratvirus	25.0	2.5e-09
WP_044750449.1|2224289_2225012_-	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
WP_047339872.1|2225008_2225656_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
WP_047339873.1|2225652_2229111_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_047339874.1|2229114_2230431_-	type VI secretion system protein TssL	NA	NA	NA	NA	NA
WP_014503442.1|2230432_2231770_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_047339875.1|2231766_2233185_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_014503444.1|2233181_2233721_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041183296.1|2233729_2235667_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	28.6	2.6e-39
WP_041183297.1|2235930_2236389_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154235477.1|2236783_2237278_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027703476.1|2237343_2237841_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047339876.1|2238027_2240733_-	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	30.7	5.6e-80
WP_027703474.1|2240765_2241776_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_047339877.1|2241739_2243617_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_011259603.1|2243620_2244124_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 2
NZ_CP007810	Xanthomonas oryzae pv. oryzicola strain YM15, complete genome	4430829	2448340	2458384	4430829	tRNA	Escherichia_phage(16.67%)	8	NA	NA
WP_014503645.1|2448340_2448820_-	glycoside hydrolase family 104 protein	NA	D5LH07	Escherichia_phage	67.1	3.0e-53
WP_047340503.1|2449063_2449813_-	isopentenyl transferase	NA	NA	NA	NA	NA
WP_003481884.1|2450878_2451091_-	carbon storage regulator CsrA	NA	J7I430	Pseudomonas_phage	76.5	1.3e-13
WP_047339917.1|2451230_2453879_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	40.0	9.7e-85
WP_014503650.1|2453980_2454469_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_014503651.1|2454770_2455805_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	61.0	3.6e-112
WP_024710528.1|2455977_2456619_-	transcriptional repressor LexA	NA	A0A1W6JNS2	Morganella_phage	40.2	1.8e-13
WP_024710529.1|2456707_2458384_-	2-polyprenylphenol 6-hydroxylase	NA	E5EQ95	Micromonas_sp._RCC1109_virus	27.5	1.9e-38
>prophage 3
NZ_CP007810	Xanthomonas oryzae pv. oryzicola strain YM15, complete genome	4430829	2539091	2633529	4430829	holin,head,plate,tRNA,tail,terminase,integrase,portal,capsid	Stenotrophomonas_phage(47.73%)	98	2566049:2566094	2610234:2610279
WP_047339933.1|2539091_2540372_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	55.1	1.3e-98
WP_082348452.1|2540391_2541144_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_024712337.1|2541504_2541972_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_044750525.1|2542465_2543779_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_014503747.1|2543900_2545109_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_014503748.1|2545191_2546277_-	phosphoserine transaminase	NA	M1Q1P2	Streptococcus_phage	43.0	3.7e-75
WP_014503749.1|2546451_2547420_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
WP_041183338.1|2547719_2548376_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
WP_014503750.1|2548317_2549130_-	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_014503751.1|2549361_2549637_+	polyhydroxyalkanoic acid system family protein	NA	NA	NA	NA	NA
WP_047339934.1|2549798_2550362_+	phasin family protein	NA	NA	NA	NA	NA
WP_014503754.1|2552185_2552923_-	histidine utilization repressor	NA	NA	NA	NA	NA
WP_047339935.1|2553247_2554618_-	formimidoylglutamate deiminase	NA	NA	NA	NA	NA
WP_024712417.1|2554678_2555884_+	imidazolonepropionase	NA	NA	NA	NA	NA
WP_024712416.1|2555897_2557439_+	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	40.9	4.6e-79
WP_014503758.1|2557623_2558481_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_024712415.1|2558497_2560165_+	urocanate hydratase	NA	NA	NA	NA	NA
WP_024712414.1|2560557_2561652_+	acyltransferase	NA	NA	NA	NA	NA
WP_014503761.1|2561781_2562510_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024710852.1|2563299_2565321_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_047339936.1|2565459_2566002_+	GspH/FimT family pseudopilin	NA	NA	NA	NA	NA
2566049:2566094	attL	TTGGCGCCCGAAGTTGGACTCGAACCAACGACCCCCTGATTAACAG	NA	NA	NA	NA
WP_047339937.1|2566268_2567459_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	NA	NA	NA	NA
WP_047339938.1|2567803_2568061_+	hypothetical protein	NA	NA	NA	NA	NA
WP_053056045.1|2568063_2570292_+	bifunctional DNA primase/polymerase	NA	A0A0S0MX19	Pseudomonas_phage	55.3	1.2e-88
WP_047339939.1|2570803_2571304_+	hypothetical protein	NA	A0A1X9IAM2	Xanthomonas_phage	34.5	2.1e-12
WP_047339940.1|2571296_2571542_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047339941.1|2571564_2571846_-	hypothetical protein	NA	A0A1J0MFM9	Staphylococcus_phage	42.5	9.1e-10
WP_047339942.1|2572159_2572885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047339943.1|2573380_2573890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047339944.1|2573892_2574663_-	restriction endonuclease, SacI family	NA	Q83VS8	Escherichia_phage	34.5	4.1e-28
WP_075251766.1|2575717_2576119_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_075245967.1|2576115_2576625_+	DUF4123 domain-containing protein	NA	A4PE24	Ralstonia_virus	34.4	1.8e-08
WP_047340512.1|2576605_2576947_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075251474.1|2576960_2577668_+	hypothetical protein	NA	A4PE25	Ralstonia_virus	27.5	6.3e-07
WP_053070556.1|2577664_2578417_+	immunity 52 family protein	NA	NA	NA	NA	NA
WP_011258480.1|2578483_2579185_-	site-specific DNA-methyltransferase	NA	V9IQV5	Stenotrophomonas_phage	76.6	1.4e-104
WP_053503138.1|2579102_2579348_-	Com family DNA-binding transcriptional regulator	NA	V9IQK2	Stenotrophomonas_phage	51.2	4.1e-14
WP_047339949.1|2579373_2580396_-|portal	phage portal protein	portal	A0A2H4J922	uncultured_Caudovirales_phage	71.8	4.1e-140
WP_047339950.1|2580395_2582180_-|terminase	terminase ATPase subunit family protein	terminase	V9IQL5	Stenotrophomonas_phage	75.5	3.4e-267
WP_047339951.1|2582301_2583144_+|capsid	GPO family capsid scaffolding protein	capsid	A0A2H4J928	uncultured_Caudovirales_phage	52.9	1.5e-68
WP_047339952.1|2583190_2584207_+|capsid	phage major capsid protein, P2 family	capsid	Q9ZXM3	Pseudomonas_virus	70.2	1.2e-136
WP_047339953.1|2584210_2584930_+|terminase	terminase endonuclease subunit	terminase	Q9ZXM2	Pseudomonas_virus	63.4	2.0e-69
WP_047339954.1|2585029_2585497_+|head	head completion/stabilization protein	head	V9IQW6	Stenotrophomonas_phage	49.7	3.2e-31
WP_011258473.1|2585496_2585706_+|tail	tail protein X	tail	K4PAW7	Burkholderia_phage	58.0	3.5e-14
WP_011258472.1|2585710_2586067_+	membrane protein	NA	V9IQG9	Stenotrophomonas_phage	56.1	3.5e-22
WP_047339955.1|2586059_2586335_+|holin	phage holin family protein	holin	V9IQV8	Stenotrophomonas_phage	59.8	5.1e-21
WP_113279667.1|2586331_2586973_+	glycoside hydrolase family 19 protein	NA	V9IQK6	Stenotrophomonas_phage	61.5	9.3e-50
WP_047339957.1|2586972_2587461_+	hypothetical protein	NA	V9IQW8	Stenotrophomonas_phage	51.4	1.1e-26
WP_047339958.1|2587457_2587877_+|tail	phage tail protein	tail	A0A2H4J906	uncultured_Caudovirales_phage	63.0	5.3e-38
WP_047339959.1|2587864_2588311_+	phage virion morphogenesis protein	NA	V9IQH0	Stenotrophomonas_phage	56.1	4.1e-36
WP_047339960.1|2588802_2589975_+	DUF3800 domain-containing protein	NA	NA	NA	NA	NA
WP_047339961.1|2590105_2590996_+|plate	baseplate J/gp47 family protein	plate	V9IQV9	Stenotrophomonas_phage	53.4	3.0e-83
WP_011408141.1|2590988_2591534_+|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	54.7	2.1e-50
WP_047339962.1|2591543_2593049_+|tail	tail fiber protein	tail	V9IQX0	Stenotrophomonas_phage	47.8	1.1e-53
WP_047339963.1|2593056_2593635_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047339964.1|2593695_2594259_+|plate	phage baseplate assembly protein V	plate	Q9ZXL0	Pseudomonas_virus	44.3	1.4e-25
WP_011258460.1|2594255_2594615_+	GPW/gp25 family protein	NA	V9IQW0	Stenotrophomonas_phage	65.3	1.2e-35
WP_047339965.1|2594626_2595793_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	E5FFG9	Burkholderia_phage	62.5	1.4e-131
WP_047339966.1|2595823_2596333_+|tail	phage major tail tube protein	tail	V9IQX1	Stenotrophomonas_phage	79.3	4.0e-72
WP_047339967.1|2596377_2596680_+|tail	phage tail assembly protein	tail	A4PE51	Ralstonia_virus	62.6	1.8e-24
WP_011258456.1|2596688_2596802_+|tail	GpE family phage tail protein	tail	A0A0M4R2P3	Salmonella_phage	68.6	4.2e-06
WP_047339968.1|2596834_2599705_+|tail	phage tail tape measure protein	tail	V9IQL1	Stenotrophomonas_phage	47.9	2.6e-200
WP_047339969.1|2599717_2600119_+|tail	phage tail protein	tail	V9IQX3	Stenotrophomonas_phage	62.9	1.0e-38
WP_047339970.1|2600115_2601102_+	phage late control D family protein	NA	V9IQM7	Stenotrophomonas_phage	54.5	1.4e-92
WP_047339971.1|2601710_2602142_-	transcriptional regulator	NA	E5E3P4	Burkholderia_phage	36.4	4.4e-11
WP_080344395.1|2602213_2602474_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182927.1|2602476_2602794_+	hypothetical protein	NA	V9IQW3	Stenotrophomonas_phage	59.8	3.9e-25
WP_047339972.1|2602806_2603085_+	hypothetical protein	NA	NA	NA	NA	NA
WP_113279671.1|2603326_2605987_+	toprim domain-containing protein	NA	V9IQW5	Stenotrophomonas_phage	70.5	0.0e+00
WP_012445510.1|2606310_2606529_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012445511.1|2606525_2606804_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047339974.1|2606793_2607066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082352986.1|2607256_2607565_+	hypothetical protein	NA	V9IQL6	Stenotrophomonas_phage	48.6	6.1e-15
WP_041182711.1|2607557_2607740_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182712.1|2607732_2608005_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008572787.1|2608001_2608226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_103057781.1|2608291_2608495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182715.1|2608915_2610157_+|integrase	integrase	integrase	V9IQN0	Stenotrophomonas_phage	53.9	4.8e-119
WP_014503765.1|2610363_2610819_-	type IV pilin protein	NA	NA	NA	NA	NA
2610234:2610279	attR	TTGGCGCCCGAAGTTGGACTCGAACCAACGACCCCCTGATTAACAG	NA	NA	NA	NA
WP_024710850.1|2610825_2613846_-	pilus assembly protein	NA	NA	NA	NA	NA
WP_014503767.1|2614765_2615275_-	pilus assembly protein	NA	NA	NA	NA	NA
WP_041183344.1|2615278_2616445_-	PilW family protein	NA	NA	NA	NA	NA
WP_024710847.1|2616441_2616918_-	type IV pilus modification protein PilV	NA	NA	NA	NA	NA
WP_014503769.1|2616914_2617430_-	GspH/FimT family pseudopilin	NA	A0A1W6JT76	Pseudomonas_phage	43.8	3.9e-06
WP_014503770.1|2617599_2618985_-	LOG family protein	NA	NA	NA	NA	NA
WP_047339977.1|2619091_2622286_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_014503772.1|2623057_2623657_-	YhgN family NAAT transporter	NA	NA	NA	NA	NA
WP_014503773.1|2623653_2624397_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011259726.1|2624393_2624714_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_014503774.1|2624852_2625431_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	39.6	1.4e-33
WP_047339978.1|2625572_2626718_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_014503776.1|2626714_2627218_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	38.7	6.2e-17
WP_014503777.1|2627276_2627546_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024710844.1|2627542_2628430_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA	NA
WP_047339979.1|2628493_2629534_+	DUF2272 domain-containing protein	NA	NA	NA	NA	NA
WP_014503780.1|2629904_2632019_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_014503782.1|2632185_2632446_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_044750588.1|2632602_2633529_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
>prophage 4
NZ_CP007810	Xanthomonas oryzae pv. oryzicola strain YM15, complete genome	4430829	3542127	3548499	4430829		Enterobacteria_phage(50.0%)	6	NA	NA
WP_014504627.1|3542127_3543474_+	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	26.9	2.0e-33
WP_024710812.1|3543521_3544925_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.6	1.5e-47
WP_047340168.1|3545041_3545950_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.7	7.0e-27
WP_014504630.1|3545946_3546504_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	47.5	6.6e-44
WP_024710811.1|3546500_3547388_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	58.5	2.6e-95
WP_014504632.1|3547443_3548499_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	47.7	1.2e-83
