The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP008776	Streptococcus pyogenes strain 5448 chromosome, complete genome	1829516	30838	43151	1829516		Synechococcus_phage(28.57%)	8	NA	NA
WP_015055883.1|30838_34564_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	27.3	1.5e-38
WP_010921773.1|34724_36179_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	2.8e-54
WP_010921774.1|36206_37229_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.1	1.1e-63
WP_010921775.1|37396_37951_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.1	5.2e-25
WP_011285343.1|38134_39682_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	51.3	8.3e-44
WP_010921776.1|39739_40864_-	SH3 domain-containing protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
WP_010921777.1|41116_42382_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_015055884.1|42659_43151_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	41.6	2.1e-17
>prophage 2
NZ_CP008776	Streptococcus pyogenes strain 5448 chromosome, complete genome	1829516	398453	453720	1829516	terminase,head,tail,portal,tRNA,capsid,integrase	Streptococcus_phage(78.0%)	69	411085:411101	441801:441817
WP_002983351.1|398453_399731_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	52.0	4.7e-93
WP_002988634.1|400122_400482_-	DUF956 family protein	NA	NA	NA	NA	NA
WP_010922588.1|400595_401507_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
WP_002983360.1|401523_402333_-	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA	NA
WP_002983363.1|402421_403414_-	PTS mannose transporter subunit IIAB	NA	NA	NA	NA	NA
WP_010922586.1|403765_404578_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_011285677.1|404841_406302_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	28.6	9.2e-37
WP_009880751.1|406455_406917_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_009880752.1|406891_407416_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010922584.1|407424_408699_+	LCP family protein	NA	NA	NA	NA	NA
WP_002988657.1|408809_409166_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002983376.1|409162_409582_-	HIT family protein	NA	NA	NA	NA	NA
WP_002983379.1|409653_410379_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.0	3.9e-20
WP_010922583.1|410381_411416_+	ABC transporter permease	NA	NA	NA	NA	NA
411085:411101	attL	GACTAATGCTATTAAGC	NA	NA	NA	NA
WP_002983385.1|411479_412271_+	phosphotransferase family protein	NA	NA	NA	NA	NA
WP_002983387.1|412270_412906_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_002988667.1|413103_414183_-|integrase	site-specific integrase	integrase	A7J266	Streptococcus_phage	86.9	1.3e-176
WP_002988670.1|414299_414851_-	hypothetical protein	NA	A7J267	Streptococcus_phage	92.3	3.4e-85
WP_002988673.1|414861_415245_-	hypothetical protein	NA	A7J268	Streptococcus_phage	99.2	5.3e-69
WP_011285676.1|415258_415660_-	helix-turn-helix transcriptional regulator	NA	A7J269	Streptococcus_phage	72.9	1.1e-40
WP_002988678.1|415934_416090_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002988681.1|416070_416484_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002988684.1|416531_416747_+	hypothetical protein	NA	M1Q1B4	Streptococcus_phage	76.8	4.2e-23
WP_002988687.1|416808_417084_+	hypothetical protein	NA	A7J272	Streptococcus_phage	95.6	5.9e-46
WP_002988693.1|417080_417251_+	hypothetical protein	NA	A7J273	Streptococcus_phage	89.3	6.9e-21
WP_002988697.1|417243_417447_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002988700.1|417443_417830_+	hypothetical protein	NA	A7J274	Streptococcus_phage	88.2	3.1e-56
WP_002988705.1|417975_418179_+	hypothetical protein	NA	A7J276	Streptococcus_phage	95.5	2.3e-31
WP_002988708.1|418266_418566_+	hypothetical protein	NA	A7J277	Streptococcus_phage	100.0	1.8e-43
WP_002988711.1|418565_419720_+	DUF2800 domain-containing protein	NA	A7J278	Streptococcus_phage	91.9	4.5e-204
WP_002988715.1|419723_420122_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002988718.1|420132_420690_+	DUF2815 family protein	NA	D2J040	Enterococcus_phage	57.9	2.5e-51
WP_002988723.1|420732_422655_+	DNA polymerase	NA	A7J280	Streptococcus_phage	96.7	0.0e+00
WP_011285674.1|422659_425044_+	DNA primase	NA	A7J282	Streptococcus_phage	94.4	4.1e-276
WP_002988730.1|425430_425706_+	VRR-NUC domain-containing protein	NA	A7J283	Streptococcus_phage	100.0	9.1e-47
WP_002988733.1|425702_427025_+	DEAD/DEAH box helicase family protein	NA	A7J284	Streptococcus_phage	98.4	1.9e-254
WP_002988735.1|427025_427193_+	hypothetical protein	NA	A7J285	Streptococcus_phage	94.5	1.9e-23
WP_002988738.1|427189_427456_+	hypothetical protein	NA	A7J287	Streptococcus_phage	65.2	5.4e-20
WP_002988740.1|427464_428316_+	site-specific DNA-methyltransferase	NA	A0A1W6JMZ7	Lactococcus_phage	71.9	1.5e-100
WP_002988743.1|428305_428497_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002988747.1|428493_428910_+	DUF722 domain-containing protein	NA	A7J289	Streptococcus_phage	100.0	6.6e-73
WP_011106637.1|428999_429452_+|terminase	terminase small subunit	terminase	A7J290	Streptococcus_phage	100.0	6.9e-76
WP_002988754.1|429441_430719_+|terminase	PBSX family phage terminase large subunit	terminase	A7J291	Streptococcus_phage	97.6	1.3e-241
WP_002988758.1|430734_432267_+|portal	phage portal protein	portal	A7J292	Streptococcus_phage	98.2	1.3e-286
WP_015446273.1|432226_433672_+|capsid	minor capsid protein	capsid	A7J293	Streptococcus_phage	92.9	3.4e-257
WP_002983423.1|433702_433891_+	hypothetical protein	NA	A7J294	Streptococcus_phage	98.4	1.4e-22
WP_002988765.1|433893_434160_+	hypothetical protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	88.6	1.7e-34
WP_002988768.1|434315_434885_+	DUF4355 domain-containing protein	NA	A7J296	Streptococcus_phage	97.9	2.6e-80
WP_002988771.1|434897_435785_+	hypothetical protein	NA	A7J297	Streptococcus_phage	99.7	3.6e-161
WP_002988776.1|435796_436153_+|head,tail	phage head-tail connector protein	head,tail	A7J298	Streptococcus_phage	97.5	2.8e-56
WP_000639437.1|436163_436442_+	hypothetical protein	NA	A7J299	Streptococcus_phage	98.9	4.2e-47
WP_002988781.1|436438_436783_+	HK97 gp10 family phage protein	NA	A7J2A0	Streptococcus_phage	99.1	6.1e-56
WP_002988782.1|436786_437146_+	hypothetical protein	NA	A7J2A1	Streptococcus_phage	97.5	6.8e-58
WP_002988784.1|437157_437757_+|tail	phage major tail protein, TP901-1 family	tail	A7J2A2	Streptococcus_phage	98.9	4.1e-92
WP_002983443.1|437810_438266_+	hypothetical protein	NA	A7J2A3	Streptococcus_phage	100.0	8.3e-77
WP_002983445.1|438340_438574_+	hypothetical protein	NA	A7J2A4	Streptococcus_phage	100.0	4.4e-34
WP_002988786.1|438588_442971_+	tape measure protein	NA	A7J2A5	Streptococcus_phage	76.4	3.2e-226
441801:441817	attR	GCTTAATAGCATTAGTC	NA	NA	NA	NA
WP_002988788.1|442982_443825_+	hypothetical protein	NA	A7J2A6	Streptococcus_phage	99.6	8.5e-160
WP_002988790.1|443834_445817_+|tail	phage tail protein	tail	A7J2A7	Streptococcus_phage	92.5	0.0e+00
WP_002988439.1|445813_446869_+	hypothetical protein	NA	A3F657	Streptococcus_phage	73.2	1.2e-126
WP_002988442.1|446868_447504_+	hypothetical protein	NA	A0A097PBF7	Streptococcus_pyogenes_phage	67.6	2.2e-75
WP_002988792.1|447514_449422_+	gp58-like family protein	NA	Q938J9	Temperate_phage	60.9	1.3e-134
WP_002988795.1|449430_449592_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002988797.1|449594_450215_+	hypothetical protein	NA	A3F662	Streptococcus_phage	88.8	8.3e-80
WP_002988799.1|450225_450525_+	hypothetical protein	NA	Q938J6	Temperate_phage	82.3	3.5e-36
WP_002988802.1|450521_450707_+	hypothetical protein	NA	Q938J5	Temperate_phage	93.4	9.5e-24
WP_002988807.1|450817_452014_+	streptodornase Sda1	NA	Q938J4	Temperate_phage	82.2	6.1e-196
WP_002988811.1|452129_453302_-	streptodornase Sda1	NA	A7J2B8	Streptococcus_phage	49.8	4.7e-76
WP_002988813.1|453540_453720_+	hypothetical protein	NA	A3F673	Streptococcus_phage	83.1	5.6e-21
>prophage 3
NZ_CP008776	Streptococcus pyogenes strain 5448 chromosome, complete genome	1829516	641575	695501	1829516	terminase,tail,holin,portal,protease,capsid,integrase	Streptococcus_phage(66.67%)	74	659880:659899	693278:693297
WP_010922489.1|641575_643858_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A2C9CYX3	Yersinia_phage	39.7	6.3e-125
WP_002983885.1|644155_644386_+	YkuJ family protein	NA	NA	NA	NA	NA
WP_002983887.1|644512_645199_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010922488.1|645198_645933_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.4	8.2e-34
WP_010922487.1|646081_647491_+	deoxyribodipyrimidine photo-lyase	NA	A0A1V0SGL1	Hokovirus	32.8	1.5e-60
WP_002989112.1|647668_649363_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	42.4	1.6e-128
WP_010922486.1|649570_650425_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.0e-39
WP_002992349.1|650577_651918_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SIT1	Klosneuvirus	30.9	8.2e-40
WP_002983901.1|651895_652111_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_003056941.1|652110_652983_+	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_003056952.1|652975_653803_+	TlyA family rRNA (cytidine-2'-O)-methyltransferase	NA	NA	NA	NA	NA
WP_002983907.1|653789_654260_+	arginine repressor	NA	NA	NA	NA	NA
WP_010922485.1|654281_655943_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_011285633.1|656114_657056_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_002983913.1|657271_658123_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	35.7	5.4e-13
WP_002992620.1|658115_658958_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_010922482.1|658935_659523_+	YpmS family protein	NA	NA	NA	NA	NA
WP_002983920.1|659621_659897_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.0	2.6e-25
659880:659899	attL	AAAGACGCTGTTAAATAATT	NA	NA	NA	NA
WP_003051793.1|659986_661129_-|integrase	site-specific integrase	integrase	M1NRJ9	Streptococcus_phage	77.4	2.4e-173
WP_011285632.1|661252_661519_-	DUF4177 domain-containing protein	NA	NA	NA	NA	NA
WP_002994744.1|661530_661911_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A1S5SFH2	Streptococcus_phage	61.1	8.0e-41
WP_011285631.1|661914_662262_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SEQ8	Streptococcus_phage	71.8	3.6e-40
WP_020837421.1|662684_662780_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_002993390.1|663415_663607_+	hypothetical protein	NA	A7J270	Streptococcus_phage	92.1	4.0e-25
WP_011285630.1|663618_664335_+	phage antirepressor KilAC domain-containing protein	NA	C9WB91	Streptococcus_virus	87.7	6.8e-118
WP_010922204.1|664366_664633_+	hypothetical protein	NA	A0A1S5SC19	Streptococcus_phage	66.3	1.1e-23
WP_011285629.1|664567_665374_-	TIGR02391 family protein	NA	A0A1S5SBU1	Streptococcus_phage	82.1	7.9e-123
WP_011284879.1|665515_665755_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011054585.1|665921_666107_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I6I3	Streptococcus_phage	72.1	3.3e-16
WP_002990080.1|666184_666496_+	hypothetical protein	NA	A0A1S5SA25	Streptococcus_phage	78.4	4.1e-43
WP_011285628.1|666497_666683_+	hypothetical protein	NA	Q938N3	Temperate_phage	88.5	5.8e-21
WP_011285627.1|667166_667556_+	DnaD domain protein	NA	Q938N2	Temperate_phage	81.4	9.3e-45
WP_002985387.1|667536_667770_+	hypothetical protein	NA	Q938N1	Temperate_phage	94.8	6.1e-36
WP_011017992.1|667766_667907_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011017565.1|667915_668122_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002988359.1|668177_668507_+	hypothetical protein	NA	J7KGX3	Streptococcus_phage	83.5	2.1e-45
WP_011285626.1|668509_669439_+	recombinase RecT	NA	M1NRN6	Streptococcus_phage	72.2	1.1e-91
WP_011285625.1|669435_670233_+	PD-(D/E)XK nuclease-like domain-containing protein	NA	J7KGZ1	Streptococcus_phage	84.5	6.0e-131
WP_011285624.1|670242_670410_+	hypothetical protein	NA	A0A1S5SEF3	Streptococcus_phage	51.9	3.3e-07
WP_002988364.1|670587_670929_+	hypothetical protein	NA	M1NS23	Streptococcus_phage	38.7	4.8e-13
WP_002988366.1|670925_671438_+	hypothetical protein	NA	Q708P9	Streptococcus_phage	78.0	2.3e-67
WP_002988369.1|671521_671791_+	hypothetical protein	NA	A7J287	Streptococcus_phage	71.9	9.6e-25
WP_010922070.1|671792_672428_+	SAM-dependent DNA methyltransferase	NA	L0P368	Streptococcus_phage	69.4	2.0e-89
WP_010922470.1|672695_673115_+	DUF1492 domain-containing protein	NA	A0A1X9I5B5	Streptococcus_phage	79.9	8.7e-57
WP_010922469.1|673223_673568_+	HNH endonuclease	NA	M1Q0W7	Streptococcus_phage	68.5	5.5e-41
WP_002994106.1|673716_674073_+	hypothetical protein	NA	M1PRL3	Streptococcus_phage	57.8	2.4e-07
WP_010922468.1|674069_675338_+|portal	phage portal protein	portal	M1PFL4	Streptococcus_phage	75.6	2.2e-188
WP_015446231.1|675330_676824_+	hypothetical protein	NA	M1Q184	Streptococcus_phage	54.6	2.2e-86
WP_010922466.1|676829_677054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015055972.1|677103_677283_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922464.1|677275_677542_+	hypothetical protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	86.4	7.3e-33
WP_011285619.1|677651_679067_+|terminase	terminase	terminase	A0A0B5A091	Streptococcus_phage	74.2	2.9e-213
WP_011285618.1|679147_679609_+	DUF4355 domain-containing protein	NA	M1Q1L0	Streptococcus_phage	53.2	3.4e-38
WP_010922461.1|679633_680545_+|capsid	phage major capsid protein	capsid	M1PFL0	Streptococcus_phage	67.3	9.9e-114
WP_010922460.1|680544_680745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922459.1|680754_681177_+	hypothetical protein	NA	A0A0B5A2F6	Streptococcus_phage	70.8	3.7e-47
WP_011285617.1|681136_681475_+	hypothetical protein	NA	M1PFF8	Streptococcus_phage	70.3	2.2e-42
WP_010922457.1|681467_681704_+	hypothetical protein	NA	A0A0B5A7G2	Streptococcus_phage	71.4	2.5e-21
WP_011285616.1|681704_682040_+	hypothetical protein	NA	A0A1P8BMR5	Lactococcus_phage	64.9	9.8e-35
WP_010922456.1|682051_682645_+|tail	tail protein	tail	M1PKG8	Streptococcus_phage	62.5	3.5e-59
WP_010922455.1|682655_682919_+	hypothetical protein	NA	A0A0B5A2F3	Streptococcus_phage	55.8	1.0e-18
WP_010922454.1|682933_683305_+	DUF5361 domain-containing protein	NA	M1PL84	Streptococcus_phage	62.4	2.9e-35
WP_010922453.1|683304_685662_+	hypothetical protein	NA	M1NRG5	Streptococcus_phage	50.6	6.5e-141
WP_010922452.1|685658_686354_+	hypothetical protein	NA	A0A1B1P761	Bacillus_phage	29.6	7.6e-05
WP_011285615.1|686350_688219_+	hypothetical protein	NA	Q938J9	Temperate_phage	56.2	1.2e-89
WP_011285614.1|688230_688668_+	DUF1617 family protein	NA	Q938J8	Temperate_phage	97.9	3.8e-71
WP_011285613.1|688664_689282_+	DUF1366 domain-containing protein	NA	Q938J7	Temperate_phage	83.9	4.4e-73
WP_002987582.1|689291_689567_+	hypothetical protein	NA	A7J2B2	Streptococcus_phage	100.0	2.6e-41
WP_003058873.1|689563_689791_+|holin	phage holin	holin	A7J2B3	Streptococcus_phage	100.0	2.0e-31
WP_010922446.1|689906_691112_+	glucosaminidase domain-containing protein	NA	Q938J4	Temperate_phage	84.3	5.9e-207
WP_011017966.1|691181_691616_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011285611.1|691886_692687_-	streptodornase Sda3	NA	NA	NA	NA	NA
WP_011017964.1|692925_693108_+	hypothetical protein	NA	A3F673	Streptococcus_phage	76.7	1.4e-19
WP_011285610.1|693638_695501_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	33.7	1.0e-88
693278:693297	attR	AAAGACGCTGTTAAATAATT	NA	NA	NA	NA
>prophage 4
NZ_CP008776	Streptococcus pyogenes strain 5448 chromosome, complete genome	1829516	813601	861340	1829516	terminase,tail,holin,portal,capsid,integrase	Streptococcus_pyogenes_phage(70.18%)	63	816968:817027	854924:855019
WP_010922381.1|813601_815866_+	glycogen/starch/alpha-glucan family phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	43.7	1.2e-11
WP_002989605.1|816122_816743_-	DUF3862 domain-containing protein	NA	NA	NA	NA	NA
816968:817027	attL	AACTCATGAACAAGACAAAAAGAAAAAACCTTGATGTAACAAGGTTTTAGTAAGTTATGA	NA	NA	NA	NA
WP_011054595.1|817105_818194_-|integrase	site-specific integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	99.2	4.7e-203
WP_011285585.1|818314_819208_-	hypothetical protein	NA	A0A1I9LJQ0	Stx_converting_phage	47.5	1.2e-68
WP_011285584.1|819243_820068_-	helix-turn-helix transcriptional regulator	NA	A0A097PBE5	Streptococcus_pyogenes_phage	91.6	1.2e-131
WP_011285583.1|820424_820583_+	hypothetical protein	NA	A0A097PAP2	Streptococcus_pyogenes_phage	100.0	4.8e-24
WP_011284882.1|820612_821212_-	hypothetical protein	NA	A0A097PAT4	Streptococcus_pyogenes_phage	100.0	3.1e-108
WP_011284881.1|821265_821475_+	hypothetical protein	NA	A0A097PAQ9	Streptococcus_pyogenes_phage	100.0	1.7e-32
WP_011054589.1|821463_821850_-	hypothetical protein	NA	A0A097PAT1	Streptococcus_pyogenes_phage	100.0	1.2e-65
WP_002992770.1|821923_822124_+	helix-turn-helix transcriptional regulator	NA	A0A141E205	Streptococcus_phage	59.6	2.7e-08
WP_011017885.1|822233_822443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011285582.1|822573_823035_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009881060.1|823248_824079_+	phage replisome organizer N-terminal domain-containing protein	NA	A0A1S5S918	Streptococcus_phage	54.7	6.4e-67
WP_011285581.1|824065_824848_+	ATP-binding protein	NA	A0A097PAQ0	Streptococcus_pyogenes_phage	96.9	3.9e-143
WP_011285579.1|824988_825342_+	hypothetical protein	NA	A0A097PAU3	Streptococcus_pyogenes_phage	54.0	2.8e-16
WP_011285578.1|825322_825577_+	hypothetical protein	NA	Q938N0	Temperate_phage	97.6	1.8e-41
WP_011285577.1|825598_826081_+	siphovirus Gp157 family protein	NA	Q938M9	Temperate_phage	99.4	4.1e-50
WP_011285576.1|826081_826756_+	ERF family protein	NA	Q938M8	Temperate_phage	96.0	1.3e-102
WP_011285575.1|826748_827174_+	single-stranded DNA-binding protein	NA	A0A097PAQ3	Streptococcus_pyogenes_phage	82.3	2.8e-55
WP_011106686.1|827179_827383_+	hypothetical protein	NA	Q938M6	Temperate_phage	100.0	4.7e-32
WP_011285574.1|827382_827823_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A097PAS0	Streptococcus_pyogenes_phage	97.9	4.5e-80
WP_011284873.1|827819_828176_+	hypothetical protein	NA	A0A097PAU4	Streptococcus_pyogenes_phage	100.0	2.9e-61
WP_002995955.1|828417_828654_+	DUF3310 domain-containing protein	NA	A0A097PAQ7	Streptococcus_pyogenes_phage	100.0	2.4e-40
WP_002995952.1|828650_828821_+	hypothetical protein	NA	Q938M0	Temperate_phage	87.1	7.9e-09
WP_011018134.1|828817_829102_+	hypothetical protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	87.2	8.9e-37
WP_011018133.1|829103_829736_+	SAM-dependent DNA methyltransferase	NA	L0P368	Streptococcus_phage	68.6	2.3e-85
WP_011285572.1|829738_830263_+	DUF1642 domain-containing protein	NA	J7KK91	Streptococcus_phage	51.1	2.3e-38
WP_011018131.1|830259_830526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011054810.1|830811_831246_+	ArpU family transcriptional regulator	NA	J7KDQ1	Streptococcus_phage	94.4	2.2e-71
WP_011285571.1|831855_832236_+	hypothetical protein	NA	A0A097PAR5	Streptococcus_pyogenes_phage	100.0	1.0e-64
WP_009880266.1|832225_833500_+|terminase	PBSX family phage terminase large subunit	terminase	A0A097PAV9	Streptococcus_pyogenes_phage	100.0	1.1e-251
WP_011285570.1|833499_834825_+|portal	phage portal protein	portal	A0A097PAT2	Streptococcus_pyogenes_phage	97.2	1.6e-237
WP_011285569.1|834793_835702_+|capsid	minor capsid protein	capsid	A0A097PBF2	Streptococcus_pyogenes_phage	98.2	6.7e-86
WP_011285568.1|835708_835978_+	hypothetical protein	NA	Q938K9	Temperate_phage	85.2	5.6e-33
WP_009880262.1|836222_836792_+	DUF4355 domain-containing protein	NA	A0A097PAW3	Streptococcus_pyogenes_phage	98.4	8.5e-71
WP_009880261.1|836810_837701_+	hypothetical protein	NA	A0A097PAW2	Streptococcus_pyogenes_phage	99.4	8.6e-86
WP_009880260.1|837713_838007_+	Rho termination factor N-terminal domain-containing protein	NA	A0A097PBF3	Streptococcus_pyogenes_phage	100.0	2.0e-47
WP_009880259.1|838020_838365_+	hypothetical protein	NA	A0A097PAS2	Streptococcus_pyogenes_phage	100.0	1.1e-54
WP_011285567.1|838361_838673_+	hypothetical protein	NA	A0A097PAW7	Streptococcus_pyogenes_phage	98.1	1.0e-49
WP_009880257.1|838669_839065_+	hypothetical protein	NA	A0A097PAT9	Streptococcus_pyogenes_phage	100.0	1.8e-59
WP_009880256.1|839066_839477_+	DUF5072 family protein	NA	A0A097PAW5	Streptococcus_pyogenes_phage	100.0	1.4e-70
WP_009880255.1|839488_839995_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	100.0	2.6e-79
WP_009880254.1|840007_840325_+	hypothetical protein	NA	A0A097PAS6	Streptococcus_pyogenes_phage	100.0	4.9e-52
WP_009880253.1|840297_840756_+	hypothetical protein	NA	A0A097PAX1	Streptococcus_pyogenes_phage	100.0	2.3e-82
WP_011054802.1|840748_842554_+|tail	tail protein	tail	A0A097PAU2	Streptococcus_pyogenes_phage	99.7	8.8e-263
WP_009880250.1|842554_844039_+|tail	phage tail family protein	tail	A0A097PAW9	Streptococcus_pyogenes_phage	99.8	4.3e-292
WP_011285566.1|844039_847480_+|tail	phage tail protein	tail	A0A097PBF5	Streptococcus_pyogenes_phage	98.7	0.0e+00
WP_015055954.1|847484_849347_+	hypothetical protein	NA	A0A097PAT0	Streptococcus_pyogenes_phage	99.4	0.0e+00
WP_011285564.1|849357_849705_+	DUF1366 domain-containing protein	NA	A0A097PAX5	Streptococcus_pyogenes_phage	99.1	6.5e-58
WP_015055952.1|849854_850178_+	hypothetical protein	NA	A0A097PAX2	Streptococcus_pyogenes_phage	100.0	7.7e-53
WP_011285562.1|850177_850510_+|holin	phage holin	holin	A0A097PBF6	Streptococcus_pyogenes_phage	99.1	7.4e-51
WP_011285561.1|850511_851276_+	CHAP domain-containing protein	NA	A0A097PAT3	Streptococcus_pyogenes_phage	98.4	8.0e-149
WP_011054796.1|851287_851890_+	hypothetical protein	NA	A0A097PAX9	Streptococcus_pyogenes_phage	98.8	7.8e-91
WP_011054795.1|851900_852674_+	hypothetical protein	NA	A0A097PAV0	Streptococcus_pyogenes_phage	100.0	3.9e-135
WP_009880241.1|852683_852905_+	hypothetical protein	NA	A0A097PAX7	Streptococcus_pyogenes_phage	84.5	2.5e-18
WP_009880240.1|852904_853564_+	hypothetical protein	NA	A0A097PBF7	Streptococcus_pyogenes_phage	100.0	8.5e-123
WP_011285560.1|853685_854441_-	streptococcal pyrogenic exotoxin SpeA	NA	A0A097PAT7	Streptococcus_pyogenes_phage	99.6	1.9e-142
WP_011285559.1|854660_854849_+	hypothetical protein	NA	J7KIW4	Streptococcus_phage	82.3	3.4e-21
WP_011285558.1|855439_856054_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	52.3	1.1e-50
854924:855019	attR	AACTCATGAACAAGACAAAAAGAAAAAACCTTGATGTAACAAGGTTTTAGTAAGTTATGATTACTTACGGTAAGCATTGATGGAGCTGGTGGGAGT	NA	NA	NA	NA
WP_010922378.1|856180_856966_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002984437.1|856975_857674_-	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	27.3	6.6e-09
WP_010922377.1|857673_858045_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010922376.1|858229_861340_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	29.9	3.7e-120
>prophage 5
NZ_CP008776	Streptococcus pyogenes strain 5448 chromosome, complete genome	1829516	1204133	1214736	1829516		Streptococcus_phage(57.14%)	9	NA	NA
WP_011285480.1|1204133_1205276_-	cysteine desulfurase	NA	H7BUW1	unidentified_phage	31.7	7.8e-15
WP_010922142.1|1205510_1205951_+	membrane protein	NA	NA	NA	NA	NA
WP_002990257.1|1205980_1207249_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_010922141.1|1207336_1208689_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.0	4.5e-30
WP_010922140.1|1208909_1209251_-	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	41.1	5.9e-19
WP_010922139.1|1209311_1210478_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	34.4	1.8e-38
WP_002985140.1|1210571_1211258_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
WP_002985142.1|1211254_1212418_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	65.1	3.4e-143
WP_010922138.1|1212525_1214736_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	69.1	2.9e-268
>prophage 6
NZ_CP008776	Streptococcus pyogenes strain 5448 chromosome, complete genome	1829516	1385020	1391671	1829516	portal	Streptococcus_phage(66.67%)	12	NA	NA
WP_010922009.1|1385020_1385845_-	asparagine ligase A	NA	M1PB22	Moumouvirus	33.1	6.2e-22
WP_011285437.1|1385868_1386207_-	Fic family protein	NA	NA	NA	NA	NA
WP_011285436.1|1386623_1386938_-	hypothetical protein	NA	Q6DMT0	Streptococcus_phage	64.5	4.9e-20
WP_010922006.1|1387003_1387456_-|portal	phage portal protein	portal	E4ZFM3	Streptococcus_phage	84.9	4.4e-62
WP_010922005.1|1387560_1387833_-	hypothetical protein	NA	E4ZFM1	Streptococcus_phage	48.1	1.2e-06
WP_011285435.1|1387851_1388157_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_002991611.1|1388156_1388459_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_015055928.1|1388513_1388690_-	prophage LambdaSa04	NA	M1PSF2	Streptococcus_phage	86.2	3.2e-21
WP_160338849.1|1388705_1389599_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010922001.1|1389598_1389823_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010921999.1|1390626_1391472_+	DUF2326 domain-containing protein	NA	NA	NA	NA	NA
WP_002985621.1|1391461_1391671_+	helix-turn-helix domain-containing protein	NA	A0A2K5B263	Erysipelothrix_phage	61.5	1.3e-16
>prophage 7
NZ_CP008776	Streptococcus pyogenes strain 5448 chromosome, complete genome	1829516	1494414	1500447	1829516		Streptococcus_phage(100.0%)	9	NA	NA
WP_010921936.1|1494414_1495242_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	79.1	1.4e-127
WP_011284536.1|1495315_1495672_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	65.8	6.3e-40
WP_010921934.1|1495969_1496599_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_002985833.1|1496645_1497038_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010921933.1|1497064_1497928_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.0	1.7e-115
WP_002985838.1|1497932_1498256_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
WP_010921932.1|1498660_1498900_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010921931.1|1498918_1499794_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	43.8	7.7e-63
WP_010921930.1|1499811_1500447_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	63.4	1.2e-65
