The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP010867	Streptococcus agalactiae strain SS1 chromosome, complete genome	2092071	36582	48647	2092071		Synechococcus_phage(28.57%)	8	NA	NA
WP_001042250.1|36582_40308_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.9	1.9e-38
WP_000220676.1|40541_41996_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	3.7e-54
WP_001291328.1|42023_43046_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.7	1.1e-63
WP_000685109.1|43213_43762_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	1.4e-25
WP_000780022.1|43784_44537_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000166549.1|44556_46104_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	49.2	3.9e-78
WP_001045908.1|46296_47196_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A221J6U0	Arthrobacter_phage	45.9	4.1e-19
WP_000783419.1|47342_48647_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A2D1GNZ3	Streptomyces_phage	40.5	3.7e-05
>prophage 2
NZ_CP010867	Streptococcus agalactiae strain SS1 chromosome, complete genome	2092071	589184	660622	2092071	head,capsid,holin,protease,integrase,tail,terminase	Streptococcus_phage(98.25%)	66	591084:591100	638302:638318
WP_000902645.1|589184_590540_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	D0R096	Streptococcus_phage	73.4	2.3e-191
WP_001261523.1|591061_591580_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
591084:591100	attL	AAGAACTAAAAGCTGAA	NA	NA	NA	NA
WP_001291561.1|591771_592989_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000814511.1|593070_593274_-	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_000857133.1|593734_593965_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000804885.1|593961_594384_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_001227347.1|594888_595242_+	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000336323.1|595301_595469_-	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_000691736.1|595587_597507_-	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.5	0.0e+00
WP_001814923.1|597522_597639_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001224318.1|597883_598816_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_000769868.1|598812_599814_-	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_029550625.1|599810_601988_-	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	99.9	0.0e+00
WP_000331160.1|601990_604438_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000506270.1|604421_604928_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000342539.1|604902_605400_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_001009056.1|605516_605738_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_029550624.1|605780_606986_-	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	99.8	1.8e-232
WP_000879507.1|607008_607161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813488.1|607163_608549_-	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000985015.1|608577_608964_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000420682.1|608979_609294_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000445922.1|609920_610451_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_047940089.1|610620_615912_+	YSIRK signal domain/LPXTG anchor domain surface protein	NA	NA	NA	NA	NA
WP_000459852.1|617681_619550_+	ImmA/IrrE family metallo-endopeptidase	NA	E4ZFJ9	Streptococcus_phage	80.9	2.0e-302
WP_001122250.1|619958_620528_+	hypothetical protein	NA	A0A1B0RXB3	Streptococcus_phage	81.0	1.1e-86
WP_000905644.1|620566_622522_-	DNA polymerase	NA	D0R0B0	Streptococcus_phage	83.6	0.0e+00
WP_000464240.1|622571_622736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000208946.1|622752_623316_-	DUF2815 family protein	NA	A0A1B0RXA9	Streptococcus_phage	93.4	3.3e-91
WP_001868547.1|623320_624442_-	DUF2800 domain-containing protein	NA	A0A1X9I6D8	Streptococcus_phage	88.5	8.0e-198
WP_000041407.1|624434_624758_-	hypothetical protein	NA	A0A1B0RXB7	Streptococcus_phage	71.2	2.0e-32
WP_001160916.1|625154_627434_+	hypothetical protein	NA	M1NSF0	Streptococcus_phage	80.7	0.0e+00
WP_001208304.1|627784_628066_+	VRR-NUC domain-containing protein	NA	M1PFY8	Streptococcus_phage	82.8	5.5e-39
WP_000777509.1|628046_629423_+	DEAD/DEAH box helicase	NA	A0A1X9I6B0	Streptococcus_phage	84.5	5.3e-228
WP_000373917.1|629415_629925_+	hypothetical protein	NA	Q6DMV6	Streptococcus_phage	54.5	1.4e-45
WP_000166942.1|630104_630287_+	hypothetical protein	NA	A0A1B0RXC3	Streptococcus_phage	88.3	2.0e-21
WP_000578149.1|630334_631372_+	methionine adenosyltransferase	NA	E4ZFL0	Streptococcus_phage	84.3	8.8e-167
WP_001138025.1|631373_631739_+	HNH endonuclease	NA	E4ZFL2	Streptococcus_phage	86.7	3.9e-61
WP_000999418.1|632027_632483_+	hypothetical protein	NA	A0A1B0RXC6	Streptococcus_phage	51.0	5.4e-44
WP_000211619.1|632454_633711_+	DNA modification methylase	NA	E4ZFL4	Streptococcus_phage	88.7	3.7e-220
WP_000176353.1|633707_634961_+	DNA (cytosine-5-)-methyltransferase	NA	M1NSK8	Streptococcus_phage	93.5	3.6e-231
WP_000342208.1|635303_635753_+	DUF4314 domain-containing protein	NA	E4ZFL7	Streptococcus_phage	63.6	1.8e-15
WP_029550623.1|635804_636278_+|terminase	phage terminase small subunit P27 family	terminase	A0A1X9I6K0	Streptococcus_phage	96.2	8.6e-85
WP_000220988.1|636274_637867_+|terminase	terminase large subunit	terminase	A0A1B0RXJ8	Streptococcus_phage	95.5	2.5e-306
WP_001166641.1|637937_638195_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	E4ZFM1	Streptococcus_phage	95.3	1.2e-35
WP_001221830.1|638191_638563_+	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A1X9I6C0	Streptococcus_phage	89.4	1.2e-57
638302:638318	attR	TTCAGCTTTTAGTTCTT	NA	NA	NA	NA
WP_000149740.1|638588_638915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001225239.1|640263_640962_+|protease	Clp protease ClpP	protease	A0A1B0RXE1	Streptococcus_phage	83.2	3.8e-105
WP_000040499.1|640975_642184_+|capsid	phage major capsid protein	capsid	M1Q1R5	Streptococcus_phage	90.8	4.0e-211
WP_000988604.1|642180_642438_+|head,tail	phage gp6-like head-tail connector protein	head,tail	D0R0D7	Streptococcus_phage	77.6	9.5e-30
WP_000684963.1|642437_642776_+|head,tail	head-tail adaptor protein	head,tail	A0A1B0RXE4	Streptococcus_phage	68.8	4.7e-37
WP_000161246.1|642768_643137_+	HK97 gp10 family phage protein	NA	Q6DMT7	Streptococcus_phage	62.1	1.0e-32
WP_001209972.1|643145_643472_+	hypothetical protein	NA	M1Q1Z4	Streptococcus_phage	68.5	2.4e-38
WP_000818569.1|643474_644044_+	hypothetical protein	NA	A0A1B0RXE2	Streptococcus_phage	95.2	3.6e-98
WP_001249617.1|644055_644475_+	hypothetical protein	NA	A0A1X9I691	Streptococcus_phage	76.3	9.7e-56
WP_000918338.1|644769_647889_+|tail	phage tail tape measure protein	tail	Q6DMT2	Streptococcus_phage	77.1	5.8e-254
WP_000589859.1|647885_648611_+	hypothetical protein	NA	M1Q107	Streptococcus_phage	61.1	1.6e-82
WP_000966173.1|648610_651526_+|tail	phage tail protein	tail	Q6DMT0	Streptococcus_phage	64.1	0.0e+00
WP_000796413.1|651538_653395_+	hypothetical protein	NA	Q6DMS9	Streptococcus_phage	73.1	1.0e-258
WP_000661349.1|653412_653811_+|holin	phage holin family protein	holin	D0R0E9	Streptococcus_phage	60.8	5.1e-38
WP_000143481.1|653812_655219_+	glucosaminidase domain-containing protein	NA	A0A1B0RXL4	Streptococcus_phage	63.1	2.4e-106
WP_000123549.1|655354_655462_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_000290969.1|655769_657011_+	recombinase family protein	NA	A0A1X9I6J1	Streptococcus_phage	69.2	7.8e-170
WP_170960311.1|656913_658260_+	recombinase family protein	NA	E4ZFN9	Streptococcus_phage	79.1	4.2e-201
WP_000504420.1|658329_659103_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000247957.1|659116_660622_+	serine/threonine protein kinase	NA	A0A0G2YBE6	Acanthamoeba_polyphaga_mimivirus	25.1	3.8e-09
>prophage 3
NZ_CP010867	Streptococcus agalactiae strain SS1 chromosome, complete genome	2092071	1549532	1560266	2092071		Streptococcus_phage(84.62%)	14	NA	NA
WP_000767485.1|1549532_1550360_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	78.4	5.1e-125
WP_000287943.1|1550400_1550757_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	72.6	5.2e-42
WP_000966772.1|1550758_1551235_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.9	7.1e-39
WP_000232152.1|1551291_1552473_-	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	75.3	1.1e-168
WP_001167085.1|1552535_1553084_-	acetyltransferase	NA	M1PSC3	Streptococcus_phage	58.4	1.1e-54
WP_000158399.1|1553151_1554243_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	78.0	1.7e-165
WP_000603275.1|1554375_1555011_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_000425864.1|1555280_1556150_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	70.7	3.7e-110
WP_000358198.1|1556149_1556476_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	61.1	3.2e-30
WP_000364568.1|1556506_1557370_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	50.0	2.5e-74
WP_000715594.1|1557389_1558025_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	60.1	1.4e-66
WP_001144246.1|1558113_1558773_-	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	56.5	4.7e-65
WP_000178141.1|1558791_1559502_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.7	3.0e-17
WP_001185989.1|1559501_1560266_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.8	8.9e-15
>prophage 4
NZ_CP010867	Streptococcus agalactiae strain SS1 chromosome, complete genome	2092071	2037323	2046816	2092071		Streptococcus_phage(81.82%)	17	NA	NA
WP_000038826.1|2037323_2037701_-	DUF1492 domain-containing protein	NA	Q7Y4J3	Streptococcus_phage	37.9	3.2e-10
WP_000891151.1|2037834_2038323_-	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	58.6	1.0e-48
WP_001258765.1|2038395_2038953_-	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	59.8	2.4e-30
WP_000694573.1|2039110_2039284_-	hypothetical protein	NA	A0A1X9I5U0	Streptococcus_phage	56.1	4.3e-10
WP_001069293.1|2039280_2039538_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000656430.1|2039830_2041225_-	hypothetical protein	NA	W8CQP1	Croceibacter_phage	33.7	3.7e-43
WP_001029296.1|2041236_2042094_-	primase C-terminal domain-containing protein	NA	A0A1X9I6L2	Streptococcus_phage	72.9	3.0e-120
WP_001100460.1|2042094_2042367_-	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	56.8	1.8e-18
WP_001157003.1|2042708_2042900_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001256559.1|2042902_2043124_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000877499.1|2043120_2043453_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001259478.1|2043529_2044036_-	hypothetical protein	NA	A0A1X9I5V7	Streptococcus_phage	35.4	4.5e-07
WP_000130289.1|2044124_2044298_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021397.1|2044396_2045035_-	Bro-N domain-containing protein	NA	NA	NA	NA	NA
WP_001258609.1|2045270_2045873_-	phage repressor protein	NA	A0A1W6JPC3	Staphylococcus_phage	46.7	6.7e-42
WP_000909285.1|2045888_2046074_-	hypothetical protein	NA	A0A1X9I5U7	Streptococcus_phage	54.8	6.2e-07
WP_001080836.1|2046228_2046816_+	helix-turn-helix domain-containing protein	NA	A0A1X9I5U6	Streptococcus_phage	37.5	4.0e-15
>prophage 5
NZ_CP010867	Streptococcus agalactiae strain SS1 chromosome, complete genome	2092071	2061451	2068625	2092071		Staphylococcus_phage(33.33%)	8	NA	NA
WP_001042665.1|2061451_2062126_-	transglycosylase SLT domain-containing protein	NA	Q4Z8Z7	Staphylococcus_phage	54.3	8.9e-27
WP_000029069.1|2062231_2062771_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	46.4	1.3e-17
WP_000359358.1|2062986_2063781_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000510606.1|2063773_2064616_-	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	28.5	2.0e-15
WP_000181758.1|2064591_2065431_-	energy-coupling factor transporter ATPase	NA	W8CYL7	Bacillus_phage	31.0	6.7e-16
WP_000239225.1|2065430_2065973_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_000217762.1|2066095_2067379_-	insulinase family protein	NA	A0A2H4UVM3	Bodo_saltans_virus	23.6	1.6e-05
WP_000706188.1|2067380_2068625_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	41.3	3.7e-87
