assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001047635.1_ASM104763v1	NZ_CP011931	Leptospira interrogans serovar Manilae strain UP-MMC-NIID LP chromosome 1, complete sequence	1	793170-793272	1	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	CTCAATGCATCGCTTTTATGGTCGCTCTGCAGGTCGGTG	39	1	1	793209-793233	NZ_CP011931.1_1341619-1341643	NA	1	1	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA|82aa|up_1|NZ_CP011931.1_790071_790317_-,NA	NA|73aa|up_9|NZ_CP011931.1_783149_783368_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|38aa|up_8|NZ_CP011931.1_783376_783490_+	PRK00465, rpmJ, 50S ribosomal protein L36; Reviewed	NA|126aa|up_7|NZ_CP011931.1_783493_783871_+	PRK05179, rpsM, 30S ribosomal protein S13; Validated	NA|137aa|up_6|NZ_CP011931.1_783873_784284_+	PRK05309, PRK05309, 30S ribosomal protein S11; Validated	NA|208aa|up_5|NZ_CP011931.1_784295_784919_+	PRK05327, rpsD, 30S ribosomal protein S4; Validated	NA|326aa|up_4|NZ_CP011931.1_784941_785919_+	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional	NA|172aa|up_3|NZ_CP011931.1_785920_786436_+	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|640aa|up_2|NZ_CP011931.1_787707_789627_-	pfam07598, DUF1561, Protein of unknown function (DUF1561)	NA|82aa|up_1|NZ_CP011931.1_790071_790317_-	NA	NA|382aa|up_0|NZ_CP011931.1_791654_792800_-	COG4299, COG4299, Uncharacterized protein conserved in bacteria [Function unknown]	NA|409aa|down_0|NZ_CP011931.1_794234_795461_-	PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated	NA|122aa|down_1|NZ_CP011931.1_795444_795810_-	pfam09969, DUF2203, Uncharacterized conserved protein (DUF2203)	NA|309aa|down_2|NZ_CP011931.1_795815_796742_-	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit	NA|365aa|down_3|NZ_CP011931.1_796778_797873_-	pfam00487, FA_desaturase, Fatty acid desaturase	NA|103aa|down_4|NZ_CP011931.1_798219_798528_-	pfam10825, DUF2752, Protein of unknown function (DUF2752)	NA|107aa|down_5|NZ_CP011931.1_798588_798909_-	pfam05154, TM2, TM2 domain	NA|348aa|down_6|NZ_CP011931.1_800482_801526_+	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain	NA|375aa|down_7|NZ_CP011931.1_801745_802870_-	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]	NA|275aa|down_8|NZ_CP011931.1_802866_803691_-	cd18104, SpoU-like_RNA-MTase, SAM-dependent RNA methylase related to SpoU-TrmH	NA|316aa|down_9|NZ_CP011931.1_803687_804635_-	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]
GCF_001047635.1_ASM104763v1	NZ_CP011931	Leptospira interrogans serovar Manilae strain UP-MMC-NIID LP chromosome 1, complete sequence	2	849262-849358	2	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	TGTGGGAACTCTTACAACTTAGAATTT	27	0	0	NA	NA	NA	1	1	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA,NA|70aa|down_6|NZ_CP011931.1_857239_857449_-	NA|205aa|up_9|NZ_CP011931.1_835062_835677_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|287aa|up_8|NZ_CP011931.1_835926_836787_+	cd00586, 4HBT, 4-hydroxybenzoyl-CoA thioesterase (4HBT)	NA|442aa|up_7|NZ_CP011931.1_836823_838149_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|253aa|up_6|NZ_CP011931.1_839862_840621_+	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]	NA|258aa|up_5|NZ_CP011931.1_840622_841396_+	PRK13318, PRK13318, type III pantothenate kinase	NA|632aa|up_4|NZ_CP011931.1_842014_843910_-	pfam07598, DUF1561, Protein of unknown function (DUF1561)	NA|83aa|up_3|NZ_CP011931.1_844093_844342_-	pfam07599, DUF1563, Protein of unknown function (DUF1563)	NA|464aa|up_2|NZ_CP011931.1_845931_847323_-	COG0771, MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]	NA|111aa|up_1|NZ_CP011931.1_847405_847738_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|253aa|up_0|NZ_CP011931.1_847744_848503_+	PRK13957, PRK13957, indole-3-glycerol-phosphate synthase; Provisional	NA|354aa|down_0|NZ_CP011931.1_849593_850655_+	PRK14465, PRK14465, 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA|95aa|down_1|NZ_CP011931.1_850685_850970_+	TIGR04453, Lepto_8Cys, Cys-rich protein, LA_1312 family	NA|579aa|down_2|NZ_CP011931.1_850984_852721_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|299aa|down_3|NZ_CP011931.1_853765_854662_+	cd07938, DRE_TIM_HMGL, 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain	NA|305aa|down_4|NZ_CP011931.1_854658_855573_+	pfam09674, DUF2400, Protein of unknown function (DUF2400)	NA|287aa|down_5|NZ_CP011931.1_855637_856498_+	COG3865, COG3865, Uncharacterized protein conserved in bacteria [Function unknown]	NA|70aa|down_6|NZ_CP011931.1_857239_857449_-	NA	NA|105aa|down_7|NZ_CP011931.1_857439_857754_+	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|109aa|down_8|NZ_CP011931.1_857750_858077_+	PRK14553, PRK14553, ribosomal-processing cysteine protease Prp	NA|85aa|down_9|NZ_CP011931.1_858066_858321_+	PRK05435, rpmA, 50S ribosomal protein L27; Validated
GCF_001047635.1_ASM104763v1	NZ_CP011931	Leptospira interrogans serovar Manilae strain UP-MMC-NIID LP chromosome 1, complete sequence	3	1271412-1271501	3	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	GATGCATTGAGTTTAGAAGTGAGACG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA|62aa|up_4|NZ_CP011931.1_1264896_1265082_-,NA|140aa|down_3|NZ_CP011931.1_1276509_1276929_+,NA|247aa|down_7|NZ_CP011931.1_1279253_1279994_-,NA|233aa|down_8|NZ_CP011931.1_1280108_1280807_+	NA|188aa|up_9|NZ_CP011931.1_1256769_1257333_-	COG3762, COG3762, Predicted membrane protein [Function unknown]	NA|199aa|up_8|NZ_CP011931.1_1258874_1259471_-	pfam04011, LemA, LemA family	NA|91aa|up_7|NZ_CP011931.1_1259536_1259809_-	PHA01740, PHA01740, putative single-stranded DNA-binding protein	NA|457aa|up_6|NZ_CP011931.1_1260251_1261622_-	pfam04087, DUF389, Domain of unknown function (DUF389)	NA|949aa|up_5|NZ_CP011931.1_1261857_1264704_+	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|62aa|up_4|NZ_CP011931.1_1264896_1265082_-	NA	NA|208aa|up_3|NZ_CP011931.1_1266163_1266787_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|319aa|up_2|NZ_CP011931.1_1267554_1268511_-	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed	NA|339aa|up_1|NZ_CP011931.1_1268825_1269842_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|488aa|up_0|NZ_CP011931.1_1269895_1271359_+	TIGR01942, pcnB, poly(A) polymerase	NA|644aa|down_0|NZ_CP011931.1_1272217_1274149_-	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|107aa|down_1|NZ_CP011931.1_1274151_1274472_-	pfam04519, Bactofilin, Polymer-forming cytoskeletal	NA|240aa|down_2|NZ_CP011931.1_1275192_1275912_-	cd06413, GH25_muramidase_1, Uncharacterized bacterial muramidase containing a glycosyl hydrolase family 25 (GH25) catalytic domain	NA|140aa|down_3|NZ_CP011931.1_1276509_1276929_+	NA	NA|389aa|down_4|NZ_CP011931.1_1276925_1278092_-	cd14864, Fe-ADH-like, iron-containing alcohol dehydrogenases (Fe-ADH)-like	NA|108aa|down_5|NZ_CP011931.1_1278168_1278492_-	pfam04316, FlgM, Anti-sigma-28 factor, FlgM	NA|251aa|down_6|NZ_CP011931.1_1278504_1279257_-	cd11648, RsmI, Ribosomal RNA small subunit methyltransferase I (RsmI), also known as rRNA (cytidine-2'-O-)-methyltransferase	NA|247aa|down_7|NZ_CP011931.1_1279253_1279994_-	NA	NA|233aa|down_8|NZ_CP011931.1_1280108_1280807_+	NA	NA|643aa|down_9|NZ_CP011931.1_1281721_1283650_-	cd07570, GAT_Gln-NAD-synth, Glutamine aminotransferase (GAT, glutaminase) domain of glutamine-dependent NAD synthetases (class 7 and 8 nitrilases)
GCF_001047635.1_ASM104763v1	NZ_CP011931	Leptospira interrogans serovar Manilae strain UP-MMC-NIID LP chromosome 1, complete sequence	4	1406066-1406640	4	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	AAAGAAATTGGAAACTTAAAAAA	23	0	0	NA	NA	NA	8	8	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA|217aa|up_9|NZ_CP011931.1_1392785_1393436_-,NA|99aa|up_8|NZ_CP011931.1_1393436_1393733_-,NA|155aa|up_2|NZ_CP011931.1_1402166_1402631_+,NA|301aa|up_1|NZ_CP011931.1_1402862_1403765_-,NA|237aa|down_4|NZ_CP011931.1_1413160_1413871_+	NA|217aa|up_9|NZ_CP011931.1_1392785_1393436_-	NA	NA|99aa|up_8|NZ_CP011931.1_1393436_1393733_-	NA	NA|423aa|up_7|NZ_CP011931.1_1394443_1395712_+	NF033161, lipo_LipL41, lipoprotein LipL41	NA|349aa|up_6|NZ_CP011931.1_1395812_1396859_+	COG0400, COG0400, Predicted esterase [General function prediction only]	NA|500aa|up_5|NZ_CP011931.1_1397152_1398652_+	pfam03961, FapA, Flagellar Assembly Protein A	NA|365aa|up_4|NZ_CP011931.1_1399743_1400838_-	COG0182, COG0182, Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]	NA|356aa|up_3|NZ_CP011931.1_1400894_1401962_+	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism]	NA|155aa|up_2|NZ_CP011931.1_1402166_1402631_+	NA	NA|301aa|up_1|NZ_CP011931.1_1402862_1403765_-	NA	NA|161aa|up_0|NZ_CP011931.1_1405388_1405871_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|379aa|down_0|NZ_CP011931.1_1407633_1408770_+	cd07574, nitrilase_Rim1_like, Uncharacterized subgroup of the nitrilase superfamily; some members of this subgroup have an N-terminal RimI domain (class 12 nitrilases)	NA|173aa|down_1|NZ_CP011931.1_1408821_1409340_+	PRK14900, valS, valyl-tRNA synthetase; Provisional	NA|336aa|down_2|NZ_CP011931.1_1410122_1411130_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|200aa|down_3|NZ_CP011931.1_1412200_1412800_+	pfam05345, He_PIG, Putative Ig domain	NA|237aa|down_4|NZ_CP011931.1_1413160_1413871_+	NA	NA|522aa|down_5|NZ_CP011931.1_1414933_1416499_+	cd17470, T3SS_Flik_C, C-terminal domain of flagellar hook-length control protein FliK and similar domains	NA|265aa|down_6|NZ_CP011931.1_1416513_1417308_+	PRK09618, flgD, flagellar hook assembly protein FlgD	NA|465aa|down_7|NZ_CP011931.1_1417335_1418730_+	PRK05682, flgE, flagellar hook protein FlgE; Validated	NA|661aa|down_8|NZ_CP011931.1_1418963_1420946_+	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|99aa|down_9|NZ_CP011931.1_1422192_1422489_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCF_001047635.1_ASM104763v1	NZ_CP011931	Leptospira interrogans serovar Manilae strain UP-MMC-NIID LP chromosome 1, complete sequence	5	1521507-1521711	5	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	GTAGCGTAGACTTTTGCTTTCAACGGAGTTGTAAAAATCATCGCTTTCGTA	51	1	1	1521558-1521660	NZ_CP011931.1_1521481-1521583	NA	1	1	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA|261aa|up_3|NZ_CP011931.1_1518401_1519184_+,NA|248aa|up_2|NZ_CP011931.1_1519673_1520417_-,NA|430aa|down_2|NZ_CP011931.1_1527442_1528732_-,NA|273aa|down_3|NZ_CP011931.1_1528728_1529547_-,NA|370aa|down_6|NZ_CP011931.1_1531369_1532479_+	NA|521aa|up_9|NZ_CP011931.1_1510075_1511638_-	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]	NA|341aa|up_8|NZ_CP011931.1_1511829_1512852_+	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional	NA|366aa|up_7|NZ_CP011931.1_1512924_1514022_+	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional	NA|171aa|up_6|NZ_CP011931.1_1514018_1514531_+	TIGR03426, shape_MreD, rod shape-determining protein MreD	NA|648aa|up_5|NZ_CP011931.1_1514532_1516476_+	TIGR03423, pbp2_mrdA, penicillin-binding protein 2	NA|502aa|up_4|NZ_CP011931.1_1516462_1517968_+	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|261aa|up_3|NZ_CP011931.1_1518401_1519184_+	NA	NA|248aa|up_2|NZ_CP011931.1_1519673_1520417_-	NA	NA|76aa|up_1|NZ_CP011931.1_1520715_1520943_-	TIGR03980, conserved_hypothetical_protein, hybrid cluster protein-associated redox disulfide domain	NA|137aa|up_0|NZ_CP011931.1_1521070_1521481_+	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase	NA|335aa|down_0|NZ_CP011931.1_1522676_1523681_-	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|610aa|down_1|NZ_CP011931.1_1523709_1525539_-	pfam13372, Alginate_exp, Alginate export	NA|430aa|down_2|NZ_CP011931.1_1527442_1528732_-	NA	NA|273aa|down_3|NZ_CP011931.1_1528728_1529547_-	NA	NA|266aa|down_4|NZ_CP011931.1_1529549_1530347_-	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|294aa|down_5|NZ_CP011931.1_1530343_1531225_-	pfam09986, DUF2225, Uncharacterized protein conserved in bacteria (DUF2225)	NA|370aa|down_6|NZ_CP011931.1_1531369_1532479_+	NA	NA|266aa|down_7|NZ_CP011931.1_1532858_1533656_+	COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]	NA|488aa|down_8|NZ_CP011931.1_1533652_1535116_+	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|167aa|down_9|NZ_CP011931.1_1535112_1535613_+	cd06850, biotinyl_domain, The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase
GCF_001047635.1_ASM104763v1	NZ_CP011931	Leptospira interrogans serovar Manilae strain UP-MMC-NIID LP chromosome 1, complete sequence	6	1647739-1647839	6	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	GAGTTCCCACAATTTACACGAGATC	25	0	0	NA	NA	NA	1	1	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA|289aa|up_7|NZ_CP011931.1_1639311_1640178_-,NA|159aa|down_3|NZ_CP011931.1_1653833_1654310_+,NA|118aa|down_6|NZ_CP011931.1_1657257_1657611_+,NA|351aa|down_7|NZ_CP011931.1_1657656_1658709_+	NA|262aa|up_9|NZ_CP011931.1_1636972_1637758_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|399aa|up_8|NZ_CP011931.1_1637764_1638961_+	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|289aa|up_7|NZ_CP011931.1_1639311_1640178_-	NA	NA|742aa|up_6|NZ_CP011931.1_1640240_1642466_+	PRK00044, psd, phosphatidylserine decarboxylase; Reviewed	NA|109aa|up_5|NZ_CP011931.1_1642828_1643155_+	pfam06155, DUF971, Protein of unknown function (DUF971)	NA|355aa|up_4|NZ_CP011931.1_1643723_1644788_+	PRK08119, PRK08119, flagellar motor switch protein; Validated	NA|274aa|up_3|NZ_CP011931.1_1644784_1645606_+	TIGR03500, FliO_TIGR, flagellar biosynthetic protein FliO	NA|268aa|up_2|NZ_CP011931.1_1645638_1646442_+	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed	NA|88aa|up_1|NZ_CP011931.1_1646438_1646702_+	PRK05700, fliQ, flagellar type III secretion system protein FliQ	NA|260aa|up_0|NZ_CP011931.1_1646708_1647488_+	pfam01311, Bac_export_1, Bacterial export proteins, family 1	NA|706aa|down_0|NZ_CP011931.1_1649437_1651555_+	pfam00771, FHIPEP, FHIPEP family	NA|427aa|down_1|NZ_CP011931.1_1651607_1652888_+	PRK12724, PRK12724, flagellar biosynthesis regulator FlhF; Provisional	NA|305aa|down_2|NZ_CP011931.1_1652915_1653830_+	cd02038, FlhG-like, MinD-like ATPase FlhG	NA|159aa|down_3|NZ_CP011931.1_1653833_1654310_+	NA	NA|267aa|down_4|NZ_CP011931.1_1654437_1655238_+	PRK06288, PRK06288, RNA polymerase sigma factor WhiG; Reviewed	NA|662aa|down_5|NZ_CP011931.1_1655263_1657249_+	pfam03961, FapA, Flagellar Assembly Protein A	NA|118aa|down_6|NZ_CP011931.1_1657257_1657611_+	NA	NA|351aa|down_7|NZ_CP011931.1_1657656_1658709_+	NA	NA|94aa|down_8|NZ_CP011931.1_1658708_1658990_+	PRK04323, PRK04323, hypothetical protein; Provisional	NA|194aa|down_9|NZ_CP011931.1_1658986_1659568_+	PRK14737, gmk, guanylate kinase; Provisional
GCF_001047635.1_ASM104763v1	NZ_CP011931	Leptospira interrogans serovar Manilae strain UP-MMC-NIID LP chromosome 1, complete sequence	7	3029114-3029216	7	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	TTTTTTAATTTCATATCAAAATCTTGATCGTTTTAAGAG	39	1	1	3029153-3029177	NZ_CP011931.1_3029575-3029599	NA	1	1	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA,NA|81aa|down_1|NZ_CP011931.1_3030367_3030610_+	NA|313aa|up_9|NZ_CP011931.1_3018132_3019071_-	PRK13022, secF, protein translocase subunit SecF	NA|643aa|up_8|NZ_CP011931.1_3019075_3021004_-	PRK05812, secD, preprotein translocase subunit SecD; Reviewed	NA|249aa|up_7|NZ_CP011931.1_3021014_3021761_-	TIGR04420, Sec_Non_Glob, Sec region non-globular protein	NA|109aa|up_6|NZ_CP011931.1_3021757_3022084_-	pfam02699, YajC, Preprotein translocase subunit	NA|337aa|up_5|NZ_CP011931.1_3022139_3023150_-	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional	NA|249aa|up_4|NZ_CP011931.1_3023124_3023871_-	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|438aa|up_3|NZ_CP011931.1_3023867_3025181_-	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|372aa|up_2|NZ_CP011931.1_3025189_3026305_-	pfam13413, HTH_25, Helix-turn-helix domain	NA|258aa|up_1|NZ_CP011931.1_3026326_3027100_-	cd16325, LolA, LolA, a periplasmic chaperone	NA|390aa|up_0|NZ_CP011931.1_3027558_3028728_-	pfam07614, DUF1577, Protein of unknown function (DUF1577)	NA|144aa|down_0|NZ_CP011931.1_3029836_3030268_-	pfam13671, AAA_33, AAA domain	NA|81aa|down_1|NZ_CP011931.1_3030367_3030610_+	NA	NA|222aa|down_2|NZ_CP011931.1_3030788_3031454_+	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA|567aa|down_3|NZ_CP011931.1_3031624_3033325_+	cd00567, ACAD, Acyl-CoA dehydrogenase	NA|229aa|down_4|NZ_CP011931.1_3033465_3034152_+	cd06561, AlkD_like, A new structural DNA glycosylase	NA|301aa|down_5|NZ_CP011931.1_3034163_3035066_+	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B	NA|340aa|down_6|NZ_CP011931.1_3036396_3037416_-	cd12158, ErythrP_dh, D-Erythronate-4-Phosphate Dehydrogenase NAD-binding and catalytic domains	NA|345aa|down_7|NZ_CP011931.1_3037502_3038537_+	pfam03280, Lipase_chap, Proteobacterial lipase chaperone protein	NA|577aa|down_8|NZ_CP011931.1_3038543_3040274_+	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed	NA|257aa|down_9|NZ_CP011931.1_3040273_3041044_+	pfam13482, RNase_H_2, RNase_H superfamily
GCF_001047635.1_ASM104763v1	NZ_CP011931	Leptospira interrogans serovar Manilae strain UP-MMC-NIID LP chromosome 1, complete sequence	8	3812086-3812175	8	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	AAAAAAGTACTTGGATAATCCACCT	25	0	0	NA	NA	NA	1	1	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA|414aa|up_8|NZ_CP011931.1_3800338_3801580_+,NA|181aa|up_6|NZ_CP011931.1_3804900_3805443_+,NA|183aa|up_4|NZ_CP011931.1_3806830_3807379_+,NA|134aa|up_1|NZ_CP011931.1_3809886_3810288_+,NA|607aa|down_1|NZ_CP011931.1_3812793_3814614_+,NA|66aa|down_3|NZ_CP011931.1_3816187_3816385_+,NA|275aa|down_7|NZ_CP011931.1_3821131_3821956_-	NA|517aa|up_9|NZ_CP011931.1_3798593_3800144_+	cd14955, NHL_like_4, Uncharacterized NHL-repeat domain in bacterial and archaeal proteins	NA|414aa|up_8|NZ_CP011931.1_3800338_3801580_+	NA	NA|481aa|up_7|NZ_CP011931.1_3802287_3803730_+	cd14955, NHL_like_4, Uncharacterized NHL-repeat domain in bacterial and archaeal proteins	NA|181aa|up_6|NZ_CP011931.1_3804900_3805443_+	NA	NA|182aa|up_5|NZ_CP011931.1_3805520_3806066_+	pfam05345, He_PIG, Putative Ig domain	NA|183aa|up_4|NZ_CP011931.1_3806830_3807379_+	NA	NA|232aa|up_3|NZ_CP011931.1_3807931_3808627_-	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|395aa|up_2|NZ_CP011931.1_3808623_3809808_-	PTZ00461, PTZ00461, isovaleryl-CoA dehydrogenase; Provisional	NA|134aa|up_1|NZ_CP011931.1_3809886_3810288_+	NA	NA|254aa|up_0|NZ_CP011931.1_3810370_3811132_+	cd01714, ETF_beta, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases	NA|198aa|down_0|NZ_CP011931.1_3812194_3812788_+	COG2834, LolA, Outer membrane lipoprotein-sorting protein [Cell envelope biogenesis, outer membrane]	NA|607aa|down_1|NZ_CP011931.1_3812793_3814614_+	NA	NA|323aa|down_2|NZ_CP011931.1_3814610_3815579_+	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|66aa|down_3|NZ_CP011931.1_3816187_3816385_+	NA	NA|744aa|down_4|NZ_CP011931.1_3816440_3818672_+	pfam03772, Competence, Competence protein	NA|302aa|down_5|NZ_CP011931.1_3818634_3819540_+	TIGR00755, Ribosomal_RNA_small_subunit_methyltransferase_A, ribosomal RNA small subunit methyltransferase A	NA|504aa|down_6|NZ_CP011931.1_3819536_3821048_-	pfam08668, HDOD, HDOD domain	NA|275aa|down_7|NZ_CP011931.1_3821131_3821956_-	NA	NA|305aa|down_8|NZ_CP011931.1_3821948_3822863_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|161aa|down_9|NZ_CP011931.1_3823070_3823553_+	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
