assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001047655.1_ASM104765v1	NZ_CP011934	Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP chromosome 1, complete sequence	1	793171-793273	1	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	CTCAATGCATCGCTTTTATGGTCGCTCTGCAGGTCGGTG	39	1	1	793210-793234	NZ_CP011934.1_1341622-1341646	NA	1	1	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA|82aa|up_1|NZ_CP011934.1_790072_790318_-,NA	NA|73aa|up_9|NZ_CP011934.1_783150_783369_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|38aa|up_8|NZ_CP011934.1_783377_783491_+	PRK00465, rpmJ, 50S ribosomal protein L36; Reviewed	NA|126aa|up_7|NZ_CP011934.1_783494_783872_+	PRK05179, rpsM, 30S ribosomal protein S13; Validated	NA|137aa|up_6|NZ_CP011934.1_783874_784285_+	PRK05309, PRK05309, 30S ribosomal protein S11; Validated	NA|208aa|up_5|NZ_CP011934.1_784296_784920_+	PRK05327, rpsD, 30S ribosomal protein S4; Validated	NA|326aa|up_4|NZ_CP011934.1_784942_785920_+	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional	NA|172aa|up_3|NZ_CP011934.1_785921_786437_+	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|640aa|up_2|NZ_CP011934.1_787708_789628_-	pfam07598, DUF1561, Protein of unknown function (DUF1561)	NA|82aa|up_1|NZ_CP011934.1_790072_790318_-	NA	NA|382aa|up_0|NZ_CP011934.1_791655_792801_-	COG4299, COG4299, Uncharacterized protein conserved in bacteria [Function unknown]	NA|409aa|down_0|NZ_CP011934.1_794235_795462_-	PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated	NA|122aa|down_1|NZ_CP011934.1_795445_795811_-	pfam09969, DUF2203, Uncharacterized conserved protein (DUF2203)	NA|309aa|down_2|NZ_CP011934.1_795816_796743_-	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit	NA|365aa|down_3|NZ_CP011934.1_796779_797874_-	pfam00487, FA_desaturase, Fatty acid desaturase	NA|103aa|down_4|NZ_CP011934.1_798220_798529_-	pfam10825, DUF2752, Protein of unknown function (DUF2752)	NA|107aa|down_5|NZ_CP011934.1_798589_798910_-	pfam05154, TM2, TM2 domain	NA|348aa|down_6|NZ_CP011934.1_800483_801527_+	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain	NA|375aa|down_7|NZ_CP011934.1_801746_802871_-	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]	NA|275aa|down_8|NZ_CP011934.1_802867_803692_-	cd18104, SpoU-like_RNA-MTase, SAM-dependent RNA methylase related to SpoU-TrmH	NA|316aa|down_9|NZ_CP011934.1_803688_804636_-	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]
GCF_001047655.1_ASM104765v1	NZ_CP011934	Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP chromosome 1, complete sequence	2	849264-849360	2	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	TGTGGGAACTCTTACAACTTAGAATTT	27	0	0	NA	NA	NA	1	1	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA,NA|70aa|down_6|NZ_CP011934.1_857241_857451_-	NA|205aa|up_9|NZ_CP011934.1_835064_835679_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|287aa|up_8|NZ_CP011934.1_835928_836789_+	cd00586, 4HBT, 4-hydroxybenzoyl-CoA thioesterase (4HBT)	NA|442aa|up_7|NZ_CP011934.1_836825_838151_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|253aa|up_6|NZ_CP011934.1_839864_840623_+	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]	NA|258aa|up_5|NZ_CP011934.1_840624_841398_+	PRK13318, PRK13318, type III pantothenate kinase	NA|632aa|up_4|NZ_CP011934.1_842016_843912_-	pfam07598, DUF1561, Protein of unknown function (DUF1561)	NA|83aa|up_3|NZ_CP011934.1_844095_844344_-	pfam07599, DUF1563, Protein of unknown function (DUF1563)	NA|464aa|up_2|NZ_CP011934.1_845933_847325_-	COG0771, MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]	NA|111aa|up_1|NZ_CP011934.1_847407_847740_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|253aa|up_0|NZ_CP011934.1_847746_848505_+	PRK13957, PRK13957, indole-3-glycerol-phosphate synthase; Provisional	NA|354aa|down_0|NZ_CP011934.1_849595_850657_+	PRK14465, PRK14465, 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA|95aa|down_1|NZ_CP011934.1_850687_850972_+	TIGR04453, Lepto_8Cys, Cys-rich protein, LA_1312 family	NA|579aa|down_2|NZ_CP011934.1_850986_852723_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|299aa|down_3|NZ_CP011934.1_853767_854664_+	cd07938, DRE_TIM_HMGL, 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain	NA|305aa|down_4|NZ_CP011934.1_854660_855575_+	pfam09674, DUF2400, Protein of unknown function (DUF2400)	NA|287aa|down_5|NZ_CP011934.1_855639_856500_+	COG3865, COG3865, Uncharacterized protein conserved in bacteria [Function unknown]	NA|70aa|down_6|NZ_CP011934.1_857241_857451_-	NA	NA|105aa|down_7|NZ_CP011934.1_857441_857756_+	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|109aa|down_8|NZ_CP011934.1_857752_858079_+	PRK14553, PRK14553, ribosomal-processing cysteine protease Prp	NA|85aa|down_9|NZ_CP011934.1_858068_858323_+	PRK05435, rpmA, 50S ribosomal protein L27; Validated
GCF_001047655.1_ASM104765v1	NZ_CP011934	Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP chromosome 1, complete sequence	3	1271415-1271504	3	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	GATGCATTGAGTTTAGAAGTGAGACG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA|62aa|up_4|NZ_CP011934.1_1264899_1265085_-,NA|140aa|down_3|NZ_CP011934.1_1276512_1276932_+,NA|247aa|down_7|NZ_CP011934.1_1279256_1279997_-,NA|233aa|down_8|NZ_CP011934.1_1280111_1280810_+	NA|188aa|up_9|NZ_CP011934.1_1256772_1257336_-	COG3762, COG3762, Predicted membrane protein [Function unknown]	NA|199aa|up_8|NZ_CP011934.1_1258877_1259474_-	pfam04011, LemA, LemA family	NA|91aa|up_7|NZ_CP011934.1_1259539_1259812_-	PHA01740, PHA01740, putative single-stranded DNA-binding protein	NA|457aa|up_6|NZ_CP011934.1_1260254_1261625_-	pfam04087, DUF389, Domain of unknown function (DUF389)	NA|949aa|up_5|NZ_CP011934.1_1261860_1264707_+	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|62aa|up_4|NZ_CP011934.1_1264899_1265085_-	NA	NA|208aa|up_3|NZ_CP011934.1_1266166_1266790_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|319aa|up_2|NZ_CP011934.1_1267557_1268514_-	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed	NA|339aa|up_1|NZ_CP011934.1_1268828_1269845_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|488aa|up_0|NZ_CP011934.1_1269898_1271362_+	TIGR01942, pcnB, poly(A) polymerase	NA|644aa|down_0|NZ_CP011934.1_1272220_1274152_-	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|107aa|down_1|NZ_CP011934.1_1274154_1274475_-	pfam04519, Bactofilin, Polymer-forming cytoskeletal	NA|240aa|down_2|NZ_CP011934.1_1275195_1275915_-	cd06413, GH25_muramidase_1, Uncharacterized bacterial muramidase containing a glycosyl hydrolase family 25 (GH25) catalytic domain	NA|140aa|down_3|NZ_CP011934.1_1276512_1276932_+	NA	NA|389aa|down_4|NZ_CP011934.1_1276928_1278095_-	cd14864, Fe-ADH-like, iron-containing alcohol dehydrogenases (Fe-ADH)-like	NA|108aa|down_5|NZ_CP011934.1_1278171_1278495_-	pfam04316, FlgM, Anti-sigma-28 factor, FlgM	NA|251aa|down_6|NZ_CP011934.1_1278507_1279260_-	cd11648, RsmI, Ribosomal RNA small subunit methyltransferase I (RsmI), also known as rRNA (cytidine-2'-O-)-methyltransferase	NA|247aa|down_7|NZ_CP011934.1_1279256_1279997_-	NA	NA|233aa|down_8|NZ_CP011934.1_1280111_1280810_+	NA	NA|643aa|down_9|NZ_CP011934.1_1281724_1283653_-	cd07570, GAT_Gln-NAD-synth, Glutamine aminotransferase (GAT, glutaminase) domain of glutamine-dependent NAD synthetases (class 7 and 8 nitrilases)
GCF_001047655.1_ASM104765v1	NZ_CP011934	Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP chromosome 1, complete sequence	4	1406068-1406642	4	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	AAAGAAATTGGAAACTTAAAAAA	23	0	0	NA	NA	NA	8	8	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA|217aa|up_9|NZ_CP011934.1_1392787_1393438_-,NA|99aa|up_8|NZ_CP011934.1_1393438_1393735_-,NA|155aa|up_2|NZ_CP011934.1_1402168_1402633_+,NA|301aa|up_1|NZ_CP011934.1_1402864_1403767_-,NA|237aa|down_4|NZ_CP011934.1_1413162_1413873_+	NA|217aa|up_9|NZ_CP011934.1_1392787_1393438_-	NA	NA|99aa|up_8|NZ_CP011934.1_1393438_1393735_-	NA	NA|423aa|up_7|NZ_CP011934.1_1394445_1395714_+	NF033161, lipo_LipL41, lipoprotein LipL41	NA|349aa|up_6|NZ_CP011934.1_1395814_1396861_+	COG0400, COG0400, Predicted esterase [General function prediction only]	NA|500aa|up_5|NZ_CP011934.1_1397154_1398654_+	pfam03961, FapA, Flagellar Assembly Protein A	NA|365aa|up_4|NZ_CP011934.1_1399745_1400840_-	COG0182, COG0182, Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]	NA|356aa|up_3|NZ_CP011934.1_1400896_1401964_+	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism]	NA|155aa|up_2|NZ_CP011934.1_1402168_1402633_+	NA	NA|301aa|up_1|NZ_CP011934.1_1402864_1403767_-	NA	NA|161aa|up_0|NZ_CP011934.1_1405390_1405873_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|379aa|down_0|NZ_CP011934.1_1407635_1408772_+	cd07574, nitrilase_Rim1_like, Uncharacterized subgroup of the nitrilase superfamily; some members of this subgroup have an N-terminal RimI domain (class 12 nitrilases)	NA|173aa|down_1|NZ_CP011934.1_1408823_1409342_+	PRK14900, valS, valyl-tRNA synthetase; Provisional	NA|336aa|down_2|NZ_CP011934.1_1410124_1411132_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|200aa|down_3|NZ_CP011934.1_1412202_1412802_+	pfam05345, He_PIG, Putative Ig domain	NA|237aa|down_4|NZ_CP011934.1_1413162_1413873_+	NA	NA|522aa|down_5|NZ_CP011934.1_1414935_1416501_+	cd17470, T3SS_Flik_C, C-terminal domain of flagellar hook-length control protein FliK and similar domains	NA|265aa|down_6|NZ_CP011934.1_1416515_1417310_+	PRK09618, flgD, flagellar hook assembly protein FlgD	NA|465aa|down_7|NZ_CP011934.1_1417337_1418732_+	PRK05682, flgE, flagellar hook protein FlgE; Validated	NA|661aa|down_8|NZ_CP011934.1_1418965_1420948_+	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|99aa|down_9|NZ_CP011934.1_1422194_1422491_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCF_001047655.1_ASM104765v1	NZ_CP011934	Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP chromosome 1, complete sequence	5	1521509-1521713	5	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	GTAGCGTAGACTTTTGCTTTCAACGGAGTTGTAAAAATCATCGCTTTCGTA	51	1	1	1521560-1521662	NZ_CP011934.1_1521483-1521585	NA	1	1	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA|261aa|up_3|NZ_CP011934.1_1518403_1519186_+,NA|248aa|up_2|NZ_CP011934.1_1519675_1520419_-,NA|430aa|down_2|NZ_CP011934.1_1527444_1528734_-,NA|273aa|down_3|NZ_CP011934.1_1528730_1529549_-,NA|370aa|down_6|NZ_CP011934.1_1531371_1532481_+	NA|521aa|up_9|NZ_CP011934.1_1510077_1511640_-	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]	NA|341aa|up_8|NZ_CP011934.1_1511831_1512854_+	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional	NA|366aa|up_7|NZ_CP011934.1_1512926_1514024_+	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional	NA|171aa|up_6|NZ_CP011934.1_1514020_1514533_+	TIGR03426, shape_MreD, rod shape-determining protein MreD	NA|648aa|up_5|NZ_CP011934.1_1514534_1516478_+	TIGR03423, pbp2_mrdA, penicillin-binding protein 2	NA|502aa|up_4|NZ_CP011934.1_1516464_1517970_+	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|261aa|up_3|NZ_CP011934.1_1518403_1519186_+	NA	NA|248aa|up_2|NZ_CP011934.1_1519675_1520419_-	NA	NA|76aa|up_1|NZ_CP011934.1_1520717_1520945_-	TIGR03980, conserved_hypothetical_protein, hybrid cluster protein-associated redox disulfide domain	NA|137aa|up_0|NZ_CP011934.1_1521072_1521483_+	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase	NA|335aa|down_0|NZ_CP011934.1_1522678_1523683_-	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|610aa|down_1|NZ_CP011934.1_1523711_1525541_-	pfam13372, Alginate_exp, Alginate export	NA|430aa|down_2|NZ_CP011934.1_1527444_1528734_-	NA	NA|273aa|down_3|NZ_CP011934.1_1528730_1529549_-	NA	NA|266aa|down_4|NZ_CP011934.1_1529551_1530349_-	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|294aa|down_5|NZ_CP011934.1_1530345_1531227_-	pfam09986, DUF2225, Uncharacterized protein conserved in bacteria (DUF2225)	NA|370aa|down_6|NZ_CP011934.1_1531371_1532481_+	NA	NA|266aa|down_7|NZ_CP011934.1_1532860_1533658_+	COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]	NA|488aa|down_8|NZ_CP011934.1_1533654_1535118_+	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|167aa|down_9|NZ_CP011934.1_1535114_1535615_+	cd06850, biotinyl_domain, The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase
GCF_001047655.1_ASM104765v1	NZ_CP011934	Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP chromosome 1, complete sequence	6	1647741-1647841	6	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	GAGTTCCCACAATTTACACGAGATC	25	0	0	NA	NA	NA	1	1	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA|289aa|up_7|NZ_CP011934.1_1639313_1640180_-,NA|159aa|down_3|NZ_CP011934.1_1653835_1654312_+,NA|118aa|down_6|NZ_CP011934.1_1657259_1657613_+,NA|351aa|down_7|NZ_CP011934.1_1657658_1658711_+	NA|262aa|up_9|NZ_CP011934.1_1636974_1637760_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|399aa|up_8|NZ_CP011934.1_1637766_1638963_+	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|289aa|up_7|NZ_CP011934.1_1639313_1640180_-	NA	NA|742aa|up_6|NZ_CP011934.1_1640242_1642468_+	PRK00044, psd, phosphatidylserine decarboxylase; Reviewed	NA|109aa|up_5|NZ_CP011934.1_1642830_1643157_+	pfam06155, DUF971, Protein of unknown function (DUF971)	NA|355aa|up_4|NZ_CP011934.1_1643725_1644790_+	PRK08119, PRK08119, flagellar motor switch protein; Validated	NA|274aa|up_3|NZ_CP011934.1_1644786_1645608_+	TIGR03500, FliO_TIGR, flagellar biosynthetic protein FliO	NA|268aa|up_2|NZ_CP011934.1_1645640_1646444_+	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed	NA|88aa|up_1|NZ_CP011934.1_1646440_1646704_+	PRK05700, fliQ, flagellar type III secretion system protein FliQ	NA|260aa|up_0|NZ_CP011934.1_1646710_1647490_+	pfam01311, Bac_export_1, Bacterial export proteins, family 1	NA|706aa|down_0|NZ_CP011934.1_1649439_1651557_+	pfam00771, FHIPEP, FHIPEP family	NA|427aa|down_1|NZ_CP011934.1_1651609_1652890_+	PRK12724, PRK12724, flagellar biosynthesis regulator FlhF; Provisional	NA|305aa|down_2|NZ_CP011934.1_1652917_1653832_+	cd02038, FlhG-like, MinD-like ATPase FlhG	NA|159aa|down_3|NZ_CP011934.1_1653835_1654312_+	NA	NA|267aa|down_4|NZ_CP011934.1_1654439_1655240_+	PRK06288, PRK06288, RNA polymerase sigma factor WhiG; Reviewed	NA|662aa|down_5|NZ_CP011934.1_1655265_1657251_+	pfam03961, FapA, Flagellar Assembly Protein A	NA|118aa|down_6|NZ_CP011934.1_1657259_1657613_+	NA	NA|351aa|down_7|NZ_CP011934.1_1657658_1658711_+	NA	NA|94aa|down_8|NZ_CP011934.1_1658710_1658992_+	PRK04323, PRK04323, hypothetical protein; Provisional	NA|194aa|down_9|NZ_CP011934.1_1658988_1659570_+	PRK14737, gmk, guanylate kinase; Provisional
GCF_001047655.1_ASM104765v1	NZ_CP011934	Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP chromosome 1, complete sequence	7	3029067-3029169	7	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	TTTTTTAATTTCATATCAAAATCTTGATCGTTTTAAGAG	39	1	1	3029106-3029130	NZ_CP011934.1_3029528-3029552	NA	1	1	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA,NA|81aa|down_1|NZ_CP011934.1_3030320_3030563_+	NA|313aa|up_9|NZ_CP011934.1_3018085_3019024_-	PRK13022, secF, protein translocase subunit SecF	NA|643aa|up_8|NZ_CP011934.1_3019028_3020957_-	PRK05812, secD, preprotein translocase subunit SecD; Reviewed	NA|249aa|up_7|NZ_CP011934.1_3020967_3021714_-	TIGR04420, Sec_Non_Glob, Sec region non-globular protein	NA|109aa|up_6|NZ_CP011934.1_3021710_3022037_-	pfam02699, YajC, Preprotein translocase subunit	NA|337aa|up_5|NZ_CP011934.1_3022092_3023103_-	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional	NA|249aa|up_4|NZ_CP011934.1_3023077_3023824_-	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|438aa|up_3|NZ_CP011934.1_3023820_3025134_-	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|372aa|up_2|NZ_CP011934.1_3025142_3026258_-	pfam13413, HTH_25, Helix-turn-helix domain	NA|258aa|up_1|NZ_CP011934.1_3026279_3027053_-	cd16325, LolA, LolA, a periplasmic chaperone	NA|390aa|up_0|NZ_CP011934.1_3027511_3028681_-	pfam07614, DUF1577, Protein of unknown function (DUF1577)	NA|144aa|down_0|NZ_CP011934.1_3029789_3030221_-	pfam13671, AAA_33, AAA domain	NA|81aa|down_1|NZ_CP011934.1_3030320_3030563_+	NA	NA|222aa|down_2|NZ_CP011934.1_3030741_3031407_+	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA|567aa|down_3|NZ_CP011934.1_3031577_3033278_+	cd00567, ACAD, Acyl-CoA dehydrogenase	NA|229aa|down_4|NZ_CP011934.1_3033418_3034105_+	cd06561, AlkD_like, A new structural DNA glycosylase	NA|301aa|down_5|NZ_CP011934.1_3034116_3035019_+	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B	NA|340aa|down_6|NZ_CP011934.1_3036349_3037369_-	cd12158, ErythrP_dh, D-Erythronate-4-Phosphate Dehydrogenase NAD-binding and catalytic domains	NA|345aa|down_7|NZ_CP011934.1_3037455_3038490_+	pfam03280, Lipase_chap, Proteobacterial lipase chaperone protein	NA|577aa|down_8|NZ_CP011934.1_3038496_3040227_+	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed	NA|257aa|down_9|NZ_CP011934.1_3040226_3040997_+	pfam13482, RNase_H_2, RNase_H superfamily
GCF_001047655.1_ASM104765v1	NZ_CP011934	Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP chromosome 1, complete sequence	8	3812038-3812127	8	CRISPRCasFinder	no		cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	Orphan	AAAAAAGTACTTGGATAATCCACCT	25	0	0	NA	NA	NA	1	1	Orphan	cas3,Cas9_archaeal,cas2,cas7,cas8c,cas5,WYL,csa3,DinG	NA|414aa|up_8|NZ_CP011934.1_3800290_3801532_+,NA|181aa|up_6|NZ_CP011934.1_3804852_3805395_+,NA|183aa|up_4|NZ_CP011934.1_3806782_3807331_+,NA|134aa|up_1|NZ_CP011934.1_3809838_3810240_+,NA|607aa|down_1|NZ_CP011934.1_3812745_3814566_+,NA|66aa|down_3|NZ_CP011934.1_3816139_3816337_+,NA|275aa|down_7|NZ_CP011934.1_3821083_3821908_-	NA|517aa|up_9|NZ_CP011934.1_3798545_3800096_+	cd14955, NHL_like_4, Uncharacterized NHL-repeat domain in bacterial and archaeal proteins	NA|414aa|up_8|NZ_CP011934.1_3800290_3801532_+	NA	NA|481aa|up_7|NZ_CP011934.1_3802239_3803682_+	cd14955, NHL_like_4, Uncharacterized NHL-repeat domain in bacterial and archaeal proteins	NA|181aa|up_6|NZ_CP011934.1_3804852_3805395_+	NA	NA|182aa|up_5|NZ_CP011934.1_3805472_3806018_+	pfam05345, He_PIG, Putative Ig domain	NA|183aa|up_4|NZ_CP011934.1_3806782_3807331_+	NA	NA|232aa|up_3|NZ_CP011934.1_3807883_3808579_-	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|395aa|up_2|NZ_CP011934.1_3808575_3809760_-	PTZ00461, PTZ00461, isovaleryl-CoA dehydrogenase; Provisional	NA|134aa|up_1|NZ_CP011934.1_3809838_3810240_+	NA	NA|254aa|up_0|NZ_CP011934.1_3810322_3811084_+	cd01714, ETF_beta, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases	NA|198aa|down_0|NZ_CP011934.1_3812146_3812740_+	COG2834, LolA, Outer membrane lipoprotein-sorting protein [Cell envelope biogenesis, outer membrane]	NA|607aa|down_1|NZ_CP011934.1_3812745_3814566_+	NA	NA|323aa|down_2|NZ_CP011934.1_3814562_3815531_+	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|66aa|down_3|NZ_CP011934.1_3816139_3816337_+	NA	NA|744aa|down_4|NZ_CP011934.1_3816392_3818624_+	pfam03772, Competence, Competence protein	NA|302aa|down_5|NZ_CP011934.1_3818586_3819492_+	TIGR00755, Ribosomal_RNA_small_subunit_methyltransferase_A, ribosomal RNA small subunit methyltransferase A	NA|504aa|down_6|NZ_CP011934.1_3819488_3821000_-	pfam08668, HDOD, HDOD domain	NA|275aa|down_7|NZ_CP011934.1_3821083_3821908_-	NA	NA|305aa|down_8|NZ_CP011934.1_3821900_3822815_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|161aa|down_9|NZ_CP011934.1_3823022_3823505_+	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
