The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011934	Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP chromosome 1, complete sequence	4238922	2506287	2515705	4238922		Enterobacteria_phage(42.86%)	8	NA	NA
WP_000842260.1|2506287_2507172_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	60.3	4.8e-97
WP_000723084.1|2507172_2508222_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	51.2	5.3e-95
WP_000642169.1|2508218_2509139_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_001159758.1|2509142_2509703_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	52.9	3.5e-45
WP_000854005.1|2509899_2511648_-	glycosyltransferase	NA	A0A0F7L2F7	uncultured_marine_virus	33.3	7.7e-06
WP_000282880.1|2512372_2513194_-	glycosyltransferase	NA	A0A0F7L2F7	uncultured_marine_virus	30.0	2.4e-10
WP_000560749.1|2513703_2514501_-	glycosyltransferase	NA	A0A0F7L2F7	uncultured_marine_virus	35.6	2.7e-06
WP_000575184.1|2514613_2515705_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2P1ELT3	Moumouvirus	31.6	2.4e-37
>prophage 2
NZ_CP011934	Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP chromosome 1, complete sequence	4238922	2568697	2578309	4238922		uncultured_Mediterranean_phage(28.57%)	10	NA	NA
WP_001230567.1|2568697_2569732_-	N-acetylneuraminate synthase	NA	A0A1B1IVE2	uncultured_Mediterranean_phage	34.9	4.5e-30
WP_000516589.1|2569709_2570330_-	acetyltransferase	NA	NA	NA	NA	NA
WP_000947842.1|2570322_2571486_-	LegC family aminotransferase	NA	A0A2D2W2B8	Stenotrophomonas_phage	26.4	5.3e-11
WP_000600886.1|2571485_2572478_-	SDR family NAD(P)-dependent oxidoreductase	NA	A0A1V0SKV4	Klosneuvirus	29.2	2.1e-24
WP_000132017.1|2572480_2573167_-	acylneuraminate cytidylyltransferase family protein	NA	A0A1B1IVD3	uncultured_Mediterranean_phage	38.0	3.0e-14
WP_000797355.1|2573163_2574951_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.4	8.7e-29
WP_000947527.1|2574962_2576048_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	29.1	1.1e-05
WP_000707057.1|2576034_2576970_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_000572390.1|2576966_2577371_-	WxcM-like domain-containing protein	NA	NA	NA	NA	NA
WP_000025488.1|2577367_2578309_-	NAD(P)-dependent oxidoreductase	NA	L7RCI0	Acanthamoeba_polyphaga_moumouvirus	27.9	3.9e-20
>prophage 3
NZ_CP011934	Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP chromosome 1, complete sequence	4238922	3222853	3237260	4238922		Leptospira_phage(100.0%)	7	NA	NA
WP_033109426.1|3222853_3223783_+	hypothetical protein	NA	S5W9G5	Leptospira_phage	67.1	2.4e-14
WP_025176346.1|3223849_3224701_-	hypothetical protein	NA	S5W9A4	Leptospira_phage	68.4	7.9e-105
WP_000501191.1|3225261_3226257_-	RHS repeat-associated core domain-containing protein	NA	S5W9C6	Leptospira_phage	67.3	1.3e-82
WP_000833415.1|3226737_3233703_-	membrane protein	NA	S5W9E6	Leptospira_phage	69.0	0.0e+00
WP_000162776.1|3234005_3234890_+	hypothetical protein	NA	S5VSU6	Leptospira_phage	80.6	1.7e-134
WP_001058884.1|3234886_3236626_+	hypothetical protein	NA	S5VKK9	Leptospira_phage	83.2	8.2e-226
WP_000835589.1|3236633_3237260_+	tetratricopeptide repeat protein	NA	S5VKQ0	Leptospira_phage	57.4	3.1e-50
>prophage 1
NZ_CP011935	Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP chromosome 2, complete sequence	358377	172232	259561	358377	tRNA,transposase,protease	Pseudomonas_phage(20.0%)	60	NA	NA
WP_000264274.1|172232_173120_+|protease	protease HtpX	protease	NA	NA	NA	NA
WP_000029425.1|173641_174175_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.2	8.0e-31
WP_000125239.1|174212_175727_+|protease	serine protease	protease	A0A1V0CPG8	Kaumoebavirus	25.1	1.1e-19
WP_000944580.1|175741_177325_+	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_000599977.1|178692_179925_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001083728.1|179921_181499_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000444125.1|181495_181888_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_000466210.1|182587_182779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000050533.1|183578_184256_+	biliverdin-producing heme oxygenase	NA	M4QDD1	Prochlorococcus_phage	42.5	2.6e-42
WP_000612015.1|184230_185448_+	MFS transporter	NA	NA	NA	NA	NA
WP_048657678.1|186535_187429_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_000449680.1|188082_190215_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_001079027.1|190193_190895_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001226849.1|190919_191498_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000614777.1|191970_192696_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA	NA
WP_002039127.1|192708_193461_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000492446.1|193899_194205_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_000691276.1|194309_195665_-	membrane protein	NA	NA	NA	NA	NA
WP_000595826.1|195922_197545_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_000897623.1|197570_198629_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_033108649.1|198860_200270_+	DUF2029 domain-containing protein	NA	NA	NA	NA	NA
WP_001122445.1|200289_201432_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_000812268.1|201436_202009_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000632689.1|202441_203827_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000898542.1|203898_205311_+	MBOAT family protein	NA	A0A125RNP0	Pseudomonas_phage	33.9	1.0e-56
WP_000666151.1|205325_206486_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_000578215.1|206482_207880_+	MBOAT family protein	NA	A0A125RNP0	Pseudomonas_phage	38.0	6.7e-61
WP_002156778.1|207889_208957_+	DUF1574 domain-containing protein	NA	NA	NA	NA	NA
WP_001004760.1|208953_209298_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_000739911.1|210057_210471_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_000453426.1|210467_210995_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_000012762.1|211606_212356_+	ubiquinone/menaquinone biosynthesis methyltransferase	NA	NA	NA	NA	NA
WP_000721922.1|212495_214589_+	LruC domain-containing protein	NA	NA	NA	NA	NA
WP_000928212.1|214633_216025_+|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000835115.1|216007_218107_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000125526.1|218922_219375_-	TraR/DksA family transcriptional regulator	NA	NA	NA	NA	NA
WP_001206796.1|219392_219557_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000366213.1|220152_221046_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_048657722.1|222676_225535_+	DUF1566 domain-containing protein	NA	NA	NA	NA	NA
WP_010679676.1|225651_226188_+	DUF1566 domain-containing protein	NA	NA	NA	NA	NA
WP_000995311.1|227301_228525_+	AraC family transcriptional regulator	NA	S5VXW9	Leptospira_phage	31.0	2.1e-26
WP_001070551.1|230416_230818_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000528391.1|232225_233944_-	REC domain-containing phosphodiesterase	NA	NA	NA	NA	NA
WP_000739836.1|234410_236093_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	34.8	3.3e-22
WP_001103846.1|236389_237958_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	35.1	3.9e-17
WP_000597515.1|238488_241014_+	response regulator	NA	A0A1V0SGX0	Hokovirus	37.2	3.9e-51
WP_000723987.1|241496_242198_-	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_001068354.1|242240_242648_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001134756.1|242930_243935_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_025176383.1|244389_245778_-	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_000491581.1|246186_246558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000925580.1|246821_248279_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000757100.1|248528_248810_-	TIGR04454 family lipoprotein	NA	NA	NA	NA	NA
WP_000391762.1|248806_250771_-	cellulase family glycosylhydrolase	NA	NA	NA	NA	NA
WP_000816747.1|250898_251777_-	patatin-like phospholipase family protein	NA	A0A161HUS6	Powai_lake_megavirus	43.2	1.7e-06
WP_000119694.1|252573_252993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000094629.1|253344_254559_-	MFS transporter	NA	NA	NA	NA	NA
WP_001211395.1|255072_256362_+	acetyl-CoA hydrolase/transferase family protein	NA	NA	NA	NA	NA
WP_001049247.1|256690_257149_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001221437.1|257161_259561_+|protease	cysteine protease	protease	NA	NA	NA	NA
>prophage 1
NZ_CP011936	Leptospira interrogans serovar Manilae strain UP-MMC-NIID HP plasmid pLIMHP1, complete sequence	70055	22269	60043	70055	integrase,transposase	Leptospira_phage(62.5%)	42	21138:21156	46087:46105
21138:21156	attL	TTTTATGTGACTACTTCAT	NA	NA	NA	NA
WP_100220184.1|22269_22572_+|integrase	integrase core domain protein	integrase	NA	NA	NA	NA
WP_000447737.1|23226_23439_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000402983.1|23487_23910_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000443825.1|24257_24494_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000240418.1|24487_24829_+	endoribonuclease MazF	NA	A9D9Y1	Lactobacillus_prophage	37.1	1.8e-07
WP_000557895.1|25192_25426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144414599.1|25696_26844_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	34.5	6.3e-41
WP_000708295.1|26885_27473_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000793447.1|27638_27824_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000457405.1|27835_28300_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144414600.1|28314_29447_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	37.0	6.3e-41
WP_000413569.1|30077_30998_+	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
WP_000587204.1|31260_32187_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000811792.1|32726_33188_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000851075.1|33294_33906_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020783218.1|34565_35468_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	S5VY82	Leptospira_phage	87.0	1.1e-144
WP_100220180.1|35843_35993_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_000161325.1|36214_37249_+	DUF4917 family protein	NA	NA	NA	NA	NA
WP_158423348.1|37293_37497_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_000835630.1|37698_37998_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001240337.1|38000_38447_+	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_002156492.1|38722_39046_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000562222.1|39524_39827_+	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_000833996.1|39816_40056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000445079.1|40387_40834_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001058387.1|41560_42082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000830370.1|42133_42397_+	hypothetical protein	NA	S5VKH6	Leptospira_phage	81.2	3.4e-14
WP_048657724.1|42929_43832_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	S5VY82	Leptospira_phage	90.3	2.5e-149
WP_001228551.1|44943_45591_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000372799.1|46281_46512_+	hypothetical protein	NA	NA	NA	NA	NA
46087:46105	attR	ATGAAGTAGTCACATAAAA	NA	NA	NA	NA
WP_000878569.1|47266_47740_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000624759.1|47847_48108_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_001181767.1|48085_48502_+	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_000795145.1|48676_49093_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000263416.1|49835_49973_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_000460629.1|50192_50741_+	serine acetyltransferase	NA	NA	NA	NA	NA
WP_001085030.1|51213_52158_+	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
WP_000058748.1|52346_53273_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025176343.1|53542_55078_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000490310.1|55226_55637_-	hypothetical protein	NA	S5VXZ8	Leptospira_phage	82.1	3.5e-18
WP_000041754.1|56092_56986_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_017853078.1|59152_60043_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	S5VY82	Leptospira_phage	88.7	1.6e-145
