The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011325	Streptococcus agalactiae strain HN016 chromosome, complete genome	2064722	36564	48629	2064722		Microbacterium_phage(14.29%)	8	NA	NA
WP_001042263.1|36564_40290_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	27.0	1.6e-40
WP_000220672.1|40523_41978_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.5	6.3e-54
WP_001291325.1|42005_43028_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	44.6	9.6e-65
WP_000685111.1|43195_43747_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	1.8e-25
WP_000780020.1|43766_44519_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000166558.1|44538_46086_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	48.9	2.5e-77
WP_001045908.1|46278_47178_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A221J6U0	Arthrobacter_phage	45.9	4.1e-19
WP_000783424.1|47324_48629_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A2D1GNZ3	Streptomyces_phage	40.5	1.7e-05
>prophage 2
NZ_CP011325	Streptococcus agalactiae strain HN016 chromosome, complete genome	2064722	597249	668527	2064722	head,terminase,protease,transposase,portal,tail,holin,capsid	Streptococcus_phage(86.96%)	66	NA	NA
WP_001122304.1|597249_597450_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_001865698.1|597471_597732_+|transposase	IS3 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	43.0	3.4e-11
WP_001867107.1|597857_598067_+|transposase	transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	55.4	1.4e-15
WP_000508795.1|598239_598401_-	TM2 domain-containing protein	NA	NA	NA	NA	NA
WP_000594368.1|599142_600420_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000353149.1|600429_601086_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.8	2.2e-22
WP_000594351.1|601085_602462_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_000699093.1|602558_603212_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.6	8.1e-25
WP_000734168.1|603208_604510_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	25.7	1.7e-05
WP_000076709.1|605386_605566_+	CsbD family protein	NA	J7KJ36	Streptococcus_phage	96.4	4.3e-21
WP_000027835.1|605607_605796_+	hypothetical protein	NA	J7KIW4	Streptococcus_phage	78.2	3.3e-16
WP_000078931.1|606220_607426_+	rod shape-determining protein RodA	NA	NA	NA	NA	NA
WP_001106189.1|607544_608105_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_000134196.1|608105_610058_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.8	1.5e-143
WP_000094341.1|610151_611876_+	septation ring formation regulator EzrA	NA	NA	NA	NA	NA
WP_000589685.1|611969_612611_+	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
WP_000409124.1|612631_613117_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_000137373.1|613129_613585_-	YueI family protein	NA	W6LLD2	Streptococcus_phage	48.9	7.8e-27
WP_000022832.1|613782_615090_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	95.4	1.5e-235
WP_000823925.1|615197_616262_-	endonuclease	NA	NA	NA	NA	NA
WP_000772014.1|616490_617774_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_001127193.1|617766_618279_+	shikimate kinase	NA	NA	NA	NA	NA
WP_000089337.1|618335_619709_+	LCP family protein	NA	NA	NA	NA	NA
WP_000902654.1|619809_621165_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	D0R096	Streptococcus_phage	73.6	1.8e-191
WP_001261516.1|621686_622205_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
WP_000445926.1|622506_623037_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_125363894.1|626485_626896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000459854.1|627906_629775_+	XRE family transcriptional regulator	NA	E4ZFJ9	Streptococcus_phage	81.0	5.2e-303
WP_001122250.1|630183_630753_+	hypothetical protein	NA	A0A1B0RXB3	Streptococcus_phage	81.0	1.1e-86
WP_000905646.1|630791_632747_-	DNA polymerase	NA	D0R0B0	Streptococcus_phage	84.0	0.0e+00
WP_000208946.1|632977_633541_-	DUF2815 family protein	NA	A0A1B0RXA9	Streptococcus_phage	93.4	3.3e-91
WP_001873559.1|633545_634667_-	DUF2800 domain-containing protein	NA	A0A1X9I6D8	Streptococcus_phage	87.9	2.6e-196
WP_000041407.1|634659_634983_-	hypothetical protein	NA	A0A1B0RXB7	Streptococcus_phage	71.2	2.0e-32
WP_001160920.1|635379_637665_+	hypothetical protein	NA	E4ZFK6	Streptococcus_phage	79.1	0.0e+00
WP_001208492.1|637948_638230_+	VRR-NUC domain-containing protein	NA	M1PFY8	Streptococcus_phage	79.6	7.9e-38
WP_000768926.1|638210_639587_+	DEAD/DEAH box helicase	NA	A0A1X9I6B0	Streptococcus_phage	86.2	5.2e-231
WP_000356300.1|639579_640077_+	hypothetical protein	NA	A0A1B0RXB9	Streptococcus_phage	75.0	4.3e-63
WP_000640707.1|640469_641507_+	methionine adenosyltransferase	NA	E4ZFL0	Streptococcus_phage	84.9	2.2e-170
WP_001138031.1|641508_641874_+	HNH endonuclease	NA	A0A1B0RXJ3	Streptococcus_phage	86.0	6.6e-61
WP_000999418.1|642161_642617_+	hypothetical protein	NA	A0A1B0RXC6	Streptococcus_phage	51.0	5.4e-44
WP_000211620.1|642588_643845_+	DNA modification methylase	NA	A0A1B0RXE5	Streptococcus_phage	90.7	7.5e-221
WP_000176350.1|643841_645095_+	DNA (cytosine-5-)-methyltransferase	NA	M1NSK8	Streptococcus_phage	93.8	2.5e-232
WP_000164539.1|645172_645427_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000342209.1|645437_645887_+	DUF4314 domain-containing protein	NA	E4ZFL7	Streptococcus_phage	65.2	2.1e-16
WP_000220985.1|646393_647986_+|terminase	terminase large subunit	terminase	A0A1B0RXJ8	Streptococcus_phage	95.5	1.5e-306
WP_001140392.1|648041_648344_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_000666489.1|648343_648649_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_000424367.1|648665_648938_+	hypothetical protein	NA	E4ZFM1	Streptococcus_phage	78.0	4.1e-07
WP_000523688.1|649018_650308_+|portal	phage portal protein	portal	E4ZFM3	Streptococcus_phage	91.0	2.0e-229
WP_001225236.1|650300_650999_+|protease	Clp protease ClpP	protease	A0A1B0RXE1	Streptococcus_phage	82.8	1.4e-104
WP_000040500.1|651012_652221_+|capsid	phage major capsid protein	capsid	E4ZFM5	Streptococcus_phage	91.3	6.8e-211
WP_000988605.1|652217_652475_+|head,tail	phage gp6-like head-tail connector protein	head,tail	D0R0D7	Streptococcus_phage	78.8	4.3e-30
WP_000684962.1|652474_652813_+|head,tail	head-tail adaptor protein	head,tail	A0A1B0RXE4	Streptococcus_phage	69.6	1.2e-37
WP_000161241.1|652805_653174_+	HK97 gp10 family phage protein	NA	Q6DMT7	Streptococcus_phage	62.1	9.1e-34
WP_001209971.1|653182_653509_+	hypothetical protein	NA	M1Q1Z4	Streptococcus_phage	67.6	5.4e-38
WP_000818565.1|653511_654081_+	hypothetical protein	NA	E4ZFM9	Streptococcus_phage	97.3	5.1e-100
WP_001249616.1|654092_654512_+	hypothetical protein	NA	A0A1X9I691	Streptococcus_phage	75.5	2.8e-55
WP_000918343.1|654806_657926_+	hypothetical protein	NA	Q6DMT2	Streptococcus_phage	78.0	3.5e-259
WP_000589863.1|657922_658648_+	hypothetical protein	NA	Q6DMT1	Streptococcus_phage	58.8	2.1e-82
WP_000966169.1|658647_661563_+	carbamoylsarcosine amidase	NA	Q6DMT0	Streptococcus_phage	64.6	0.0e+00
WP_000796404.1|661575_663432_+	hypothetical protein	NA	Q6DMS9	Streptococcus_phage	73.3	2.7e-259
WP_000661349.1|663449_663848_+|holin	phage holin family protein	holin	D0R0E9	Streptococcus_phage	60.8	5.1e-38
WP_000143479.1|663849_665256_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A1B0RXL4	Streptococcus_phage	63.4	3.7e-107
WP_000123549.1|665391_665499_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_000290970.1|666036_667278_+	recombinase family protein	NA	A0A1X9I6J1	Streptococcus_phage	69.5	3.5e-170
WP_079254335.1|667222_668527_+	recombinase family protein	NA	E4ZFN9	Streptococcus_phage	80.0	1.4e-198
>prophage 3
NZ_CP011325	Streptococcus agalactiae strain HN016 chromosome, complete genome	2064722	1524219	1535737	2064722	transposase	Streptococcus_phage(90.91%)	13	NA	NA
WP_000767484.1|1524219_1525047_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	78.0	4.3e-124
WP_000287944.1|1525086_1525443_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	71.8	1.5e-41
WP_000966772.1|1525444_1525921_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.9	7.1e-39
WP_000232156.1|1525975_1527157_-	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	75.6	7.0e-168
WP_001167085.1|1527219_1527768_-	acetyltransferase	NA	M1PSC3	Streptococcus_phage	58.4	1.1e-54
WP_000603277.1|1529060_1529696_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_000425856.1|1529965_1530835_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	70.4	4.9e-110
WP_000358198.1|1530834_1531161_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	61.1	3.2e-30
WP_000364565.1|1531190_1532054_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	49.7	7.3e-74
WP_000715592.1|1532073_1532709_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	61.1	2.8e-67
WP_000160537.1|1532917_1534084_+|transposase	IS30-like element ISSag9 family transposase	transposase	NA	NA	NA	NA
WP_001144248.1|1534348_1535008_-	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	55.6	5.2e-64
WP_000178146.1|1535026_1535737_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.5	4.7e-18
>prophage 4
NZ_CP011325	Streptococcus agalactiae strain HN016 chromosome, complete genome	2064722	2034068	2041272	2064722		uncultured_Caudovirales_phage(16.67%)	8	NA	NA
WP_001042661.1|2034068_2034773_-	transglycosylase SLT domain-containing protein	NA	A0A2H4J6C5	uncultured_Caudovirales_phage	56.6	3.2e-27
WP_000029067.1|2034878_2035418_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	46.4	3.0e-17
WP_000359358.1|2035633_2036428_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000510606.1|2036420_2037263_-	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	28.5	2.0e-15
WP_000181757.1|2037238_2038078_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	30.0	3.5e-20
WP_000239224.1|2038077_2038620_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_000217765.1|2038742_2040026_-	insulinase family protein	NA	A0A2H4UVM3	Bodo_saltans_virus	23.6	1.6e-05
WP_000706190.1|2040027_2041272_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	41.5	1.7e-87
