assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001274895.1_ASM127489v1	NZ_CP006841	Corynebacterium lactis RW2-5 chromosome, complete genome	1	40062-40929	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas9	cas2,cas1,cas9,DEDDh,cas3,DinG,csa3,cas4,WYL	Type II-A, or Type II-C?,Type II-C, Type II-B,Type II-B	GCTGGGGATTGGTTCTCATTTCCCCTGATAGACTTC,GCTGGGGATTGGTTCTCATTTCCCCTGATAGACTTC,GCTGGGGATTGGTTCTCATTTCCCCTGATAGACTTC	36,36,36	0	0	NA	NA	NA:NA:NA	13,13,9	13	TypeII-A,orTypeII-C?,TypeII-C,TypeII-B,TypeII-B	cas2,cas1,cas9,DEDDh,cas3,DinG,csa3,cas4,WYL	NA,NA	NA|303aa|up_9|NZ_CP006841.1_28088_28997_-	pfam12401, DUF3662, Protein of unknown function (DUF2662)	NA|139aa|up_8|NZ_CP006841.1_29431_29848_-	COG5646, COG5646, Uncharacterized conserved protein [Function unknown]	NA|438aa|up_7|NZ_CP006841.1_30061_31375_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|214aa|up_6|NZ_CP006841.1_31634_32276_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|228aa|up_5|NZ_CP006841.1_32399_33083_-	COG3910, COG3910, Predicted ATPase [General function prediction only]	NA|343aa|up_4|NZ_CP006841.1_33079_34108_-	COG4850, COG4850, Uncharacterized conserved protein [Function unknown]	NA|111aa|up_3|NZ_CP006841.1_34220_34553_+	pfam06737, Transglycosylas, Transglycosylase-like domain	NA|251aa|up_2|NZ_CP006841.1_36094_36847_+	PRK10621, PRK10621, hypothetical protein; Provisional	NA|346aa|up_1|NZ_CP006841.1_36879_37917_-	cd19150, AKR_AKR14A1, Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ/AKR14A1) and similar proteins	NA|472aa|up_0|NZ_CP006841.1_38051_39467_+	COG3182, PiuB, Uncharacterized iron-regulated membrane protein [Function unknown]	cas2|108aa|down_0|NZ_CP006841.1_40978_41302_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|301aa|down_1|NZ_CP006841.1_41301_42204_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1101aa|down_2|NZ_CP006841.1_42200_45503_-	pfam18470, Cas9_a, Cas9 alpha-helical lobe domain	NA|112aa|down_3|NZ_CP006841.1_45887_46223_+	COG3795, COG3795, Uncharacterized protein conserved in bacteria [Function unknown]	NA|289aa|down_4|NZ_CP006841.1_46219_47086_-	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|399aa|down_5|NZ_CP006841.1_47082_48279_-	COG3268, COG3268, Uncharacterized conserved protein [Function unknown]	NA|401aa|down_6|NZ_CP006841.1_48408_49611_+	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional	NA|405aa|down_7|NZ_CP006841.1_49656_50871_+	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|129aa|down_8|NZ_CP006841.1_50873_51260_-	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes	NA|268aa|down_9|NZ_CP006841.1_51283_52087_-	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins
GCF_001274895.1_ASM127489v1	NZ_CP006841	Corynebacterium lactis RW2-5 chromosome, complete genome	2	600049-600155	2	CRISPRCasFinder	no		cas2,cas1,cas9,DEDDh,cas3,DinG,csa3,cas4,WYL	Orphan	CCGTCACCATCGGTATCGGGGTTCTTCGGGTCGGT	35	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas9,DEDDh,cas3,DinG,csa3,cas4,WYL	NA,NA	NA|212aa|up_9|NZ_CP006841.1_589314_589950_+	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed	NA|229aa|up_8|NZ_CP006841.1_590102_590789_-	COG3889, COG3889, Predicted solute binding protein [General function prediction only]	NA|409aa|up_7|NZ_CP006841.1_590930_592157_+	cd08014, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|470aa|up_6|NZ_CP006841.1_592334_593744_+	PRK07845, PRK07845, flavoprotein disulfide reductase; Reviewed	NA|92aa|up_5|NZ_CP006841.1_593740_594016_-	TIGR02200, conserved_hypothetical_protein, Glutaredoxin-like protein	NA|177aa|up_4|NZ_CP006841.1_594131_594662_-	cd00209, DHFR, Dihydrofolate reductase (DHFR)	NA|269aa|up_3|NZ_CP006841.1_594693_595500_-	PRK01827, thyA, thymidylate synthase; Reviewed	NA|252aa|up_2|NZ_CP006841.1_595507_596263_-	cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family	NA|138aa|up_1|NZ_CP006841.1_596334_596748_+	PRK11770, PRK11770, YccF domain-containing protein	NA|546aa|up_0|NZ_CP006841.1_596842_598480_-	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|803aa|down_0|NZ_CP006841.1_602786_605195_-	pfam16640, Big_3_5, Bacterial Ig-like domain (group 3)	NA|508aa|down_1|NZ_CP006841.1_605710_607234_+	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like	NA|122aa|down_2|NZ_CP006841.1_607230_607596_-	PRK07857, PRK07857, chorismate mutase	NA|867aa|down_3|NZ_CP006841.1_607652_610253_+	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|164aa|down_4|NZ_CP006841.1_610259_610751_-	pfam14539, DUF4442, Domain of unknown function (DUF4442)	NA|262aa|down_5|NZ_CP006841.1_610888_611674_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|217aa|down_6|NZ_CP006841.1_614011_614662_+	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|517aa|down_7|NZ_CP006841.1_614658_616209_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|202aa|down_8|NZ_CP006841.1_616426_617032_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|508aa|down_9|NZ_CP006841.1_617486_619010_+	PLN02820, PLN02820, 3-methylcrotonyl-CoA carboxylase, beta chain
GCF_001274895.1_ASM127489v1	NZ_CP006841	Corynebacterium lactis RW2-5 chromosome, complete genome	3	2572631-2572793	3	CRISPRCasFinder	no		cas2,cas1,cas9,DEDDh,cas3,DinG,csa3,cas4,WYL	Orphan	CAGCTTGCCGATGGCACGGACCAGCTCGTCGACGGCA	37	0	0	NA	NA	NA	2	2	Orphan	cas2,cas1,cas9,DEDDh,cas3,DinG,csa3,cas4,WYL	NA|60aa|up_1|NZ_CP006841.1_2570588_2570768_+,NA|623aa|down_5|NZ_CP006841.1_2581414_2583283_+,NA|135aa|down_8|NZ_CP006841.1_2585786_2586191_+	NA|247aa|up_9|NZ_CP006841.1_2562804_2563545_-	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|218aa|up_8|NZ_CP006841.1_2563586_2564240_-	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|287aa|up_7|NZ_CP006841.1_2564249_2565110_-	cd03295, ABC_OpuCA_Osmoprotection, ATP-binding cassette domain of the osmoprotectant transporter	NA|193aa|up_6|NZ_CP006841.1_2565153_2565732_-	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed	NA|217aa|up_5|NZ_CP006841.1_2566064_2566715_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|395aa|up_4|NZ_CP006841.1_2566738_2567923_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|324aa|up_3|NZ_CP006841.1_2568007_2568979_+	cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|445aa|up_2|NZ_CP006841.1_2569005_2570340_-	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters	NA|60aa|up_1|NZ_CP006841.1_2570588_2570768_+	NA	NA|306aa|up_0|NZ_CP006841.1_2571113_2572031_+	PRK13543, PRK13543, heme ABC exporter ATP-binding protein CcmA	NA|160aa|down_0|NZ_CP006841.1_2574265_2574745_+	pfam00582, Usp, Universal stress protein family	NA|65aa|down_1|NZ_CP006841.1_2574926_2575121_+	pfam11021, DUF2613, Protein of unknown function (DUF2613)	NA|1187aa|down_2|NZ_CP006841.1_2575163_2578724_+	pfam11847, DUF3367, Domain of unknown function (DUF3367)	NA|397aa|down_3|NZ_CP006841.1_2578781_2579972_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|386aa|down_4|NZ_CP006841.1_2580169_2581327_+	pfam11271, DUF3068, Protein of unknown function (DUF3068)	NA|623aa|down_5|NZ_CP006841.1_2581414_2583283_+	NA	NA|389aa|down_6|NZ_CP006841.1_2583654_2584821_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|286aa|down_7|NZ_CP006841.1_2584925_2585783_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|135aa|down_8|NZ_CP006841.1_2585786_2586191_+	NA	NA|387aa|down_9|NZ_CP006841.1_2586392_2587553_+	cd01146, FhuD, Fe3+-siderophore binding domain FhuD
GCF_001274895.1_ASM127489v1	NZ_CP006841	Corynebacterium lactis RW2-5 chromosome, complete genome	4	2711493-2711593	4	CRISPRCasFinder	no		cas2,cas1,cas9,DEDDh,cas3,DinG,csa3,cas4,WYL	Orphan	GGAGAAGGAGGGTCTGGATTCAATCGTGGTTCCGTGG	37	1	1	2711530-2711556	NZ_CP006841.1_2173028-2173002	NA	1	1	Orphan	cas2,cas1,cas9,DEDDh,cas3,DinG,csa3,cas4,WYL	NA,NA|105aa|down_2|NZ_CP006841.1_2716621_2716936_+	NA|619aa|up_9|NZ_CP006841.1_2697777_2699634_-	COG2251, COG2251, Predicted nuclease (RecB family) [General function prediction only]	NA|260aa|up_8|NZ_CP006841.1_2699754_2700534_+	PRK12704, PRK12704, phosphodiesterase; Provisional	NA|594aa|up_7|NZ_CP006841.1_2700702_2702484_+	COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]	NA|117aa|up_6|NZ_CP006841.1_2702801_2703152_+	pfam11774, Lsr2, Lsr2	NA|450aa|up_5|NZ_CP006841.1_2703191_2704541_+	PRK00247, PRK00247, putative inner membrane protein translocase component YidC; Validated	NA|208aa|up_4|NZ_CP006841.1_2704611_2705235_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|98aa|up_3|NZ_CP006841.1_2705508_2705802_-	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|298aa|up_2|NZ_CP006841.1_2706073_2706967_-	pfam00582, Usp, Universal stress protein family	NA|338aa|up_1|NZ_CP006841.1_2707161_2708175_+	cd02558, PSRA_1, Pseudouridine synthase, a subgroup of the RluA family	NA|260aa|up_0|NZ_CP006841.1_2708185_2708965_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|148aa|down_0|NZ_CP006841.1_2711787_2712231_-	pfam11070, DUF2871, Protein of unknown function (DUF2871)	NA|255aa|down_1|NZ_CP006841.1_2712326_2713091_-	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|105aa|down_2|NZ_CP006841.1_2716621_2716936_+	NA	NA|423aa|down_3|NZ_CP006841.1_2719136_2720405_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|529aa|down_4|NZ_CP006841.1_2720630_2722217_+	COG1432, COG1432, Uncharacterized conserved protein [Function unknown]	NA|276aa|down_5|NZ_CP006841.1_2722371_2723199_-	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|373aa|down_6|NZ_CP006841.1_2723459_2724578_+	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family	NA|127aa|down_7|NZ_CP006841.1_2724667_2725048_-	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|283aa|down_8|NZ_CP006841.1_2725259_2726108_-	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|395aa|down_9|NZ_CP006841.1_2726158_2727343_-	COG4763, COG4763, Predicted membrane protein [Function unknown]
