assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001277875.1_ASM127787v1	NZ_CP012516	Burkholderia pseudomallei strain vgh16R chromosome 2, complete sequence	1	2678374-2678466	1	CRISPRCasFinder	no		cas3,DinG,csa3	Orphan	GCGCGTCGGCGCGCGCGGCGGCGA	24	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,DinG,csa3,cas3	NA|170aa|up_4|NZ_CP012516.1_2672723_2673233_+,NA|168aa|up_3|NZ_CP012516.1_2673290_2673794_-,NA|86aa|down_6|NZ_CP012516.1_2682446_2682704_+	NA|358aa|up_9|NZ_CP012516.1_2662804_2663878_+	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional	NA|1092aa|up_8|NZ_CP012516.1_2663874_2667150_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|375aa|up_7|NZ_CP012516.1_2667152_2668277_+	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|612aa|up_6|NZ_CP012516.1_2668426_2670262_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|522aa|up_5|NZ_CP012516.1_2670617_2672183_-	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|170aa|up_4|NZ_CP012516.1_2672723_2673233_+	NA	NA|168aa|up_3|NZ_CP012516.1_2673290_2673794_-	NA	NA|342aa|up_2|NZ_CP012516.1_2673870_2674896_-	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)	NA|283aa|up_1|NZ_CP012516.1_2675110_2675959_-	pfam00231, ATP-synt, ATP synthase	NA|661aa|up_0|NZ_CP012516.1_2675955_2677938_-	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional	NA|83aa|down_0|NZ_CP012516.1_2678684_2678933_-	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional	NA|234aa|down_1|NZ_CP012516.1_2678929_2679631_-	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional	NA|103aa|down_2|NZ_CP012516.1_2679627_2679936_-	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2	NA|167aa|down_3|NZ_CP012516.1_2679928_2680429_-	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter	NA|152aa|down_4|NZ_CP012516.1_2680425_2680881_-	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional	NA|535aa|down_5|NZ_CP012516.1_2680870_2682475_-	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional	NA|86aa|down_6|NZ_CP012516.1_2682446_2682704_+	NA	NA|598aa|down_7|NZ_CP012516.1_2682835_2684629_+	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I	NA|468aa|down_8|NZ_CP012516.1_2684639_2686043_+	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated	NA|393aa|down_9|NZ_CP012516.1_2686039_2687218_+	PRK07058, PRK07058, acetate/propionate family kinase
GCF_001277875.1_ASM127787v1	NZ_CP012516	Burkholderia pseudomallei strain vgh16R chromosome 2, complete sequence	2	3118925-3119070	1,2	PILER-CR,CRISPRCasFinder	no		cas3,DinG,csa3	Orphan	GCAGAGGCGCCGCCGCCGGAATACCCGATCATCGGGATGCTCGATCGCCGAAG,CGGAATGCCCGATCATCGGGATGC	53,24	0	0	NA	NA	NA:NA	2,1	2	Orphan	WYL,DEDDh,DinG,csa3,cas3	NA|197aa|up_3|NZ_CP012516.1_3112652_3113243_+,NA|111aa|down_5|NZ_CP012516.1_3128379_3128712_-	NA|484aa|up_9|NZ_CP012516.1_3104559_3106011_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|348aa|up_8|NZ_CP012516.1_3106012_3107056_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|411aa|up_7|NZ_CP012516.1_3107061_3108294_-	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	NA|147aa|up_6|NZ_CP012516.1_3109546_3109987_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|372aa|up_5|NZ_CP012516.1_3110288_3111404_-	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|312aa|up_4|NZ_CP012516.1_3111701_3112637_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|197aa|up_3|NZ_CP012516.1_3112652_3113243_+	NA	NA|633aa|up_2|NZ_CP012516.1_3113302_3115201_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|758aa|up_1|NZ_CP012516.1_3115490_3117764_-	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|132aa|up_0|NZ_CP012516.1_3117896_3118292_-	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms]	NA|422aa|down_0|NZ_CP012516.1_3119627_3120893_+	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular	NA|614aa|down_1|NZ_CP012516.1_3121151_3122993_+	PRK06948, PRK06948, ribonucleotide reductase-like protein; Provisional	NA|604aa|down_2|NZ_CP012516.1_3123067_3124879_+	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown]	NA|344aa|down_3|NZ_CP012516.1_3125397_3126429_+	PRK07877, PRK07877, Rv1355c family protein	NA|611aa|down_4|NZ_CP012516.1_3126425_3128258_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|111aa|down_5|NZ_CP012516.1_3128379_3128712_-	NA	NA|150aa|down_6|NZ_CP012516.1_3128707_3129157_-	cd17775, CBS_pair_bact_arch, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains  present in bacteria and archaea	NA|218aa|down_7|NZ_CP012516.1_3129610_3130264_+	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC	NA|145aa|down_8|NZ_CP012516.1_3130331_3130766_-	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|377aa|down_9|NZ_CP012516.1_3131171_3132302_-	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane
GCF_001277875.1_ASM127787v1	NZ_CP012515	Burkholderia pseudomallei strain vgh16R chromosome 1, complete sequence	1	2193604-2193963	1	CRT	no		WYL,DEDDh,DinG,csa3,cas3	Orphan	CCGATGCGGTCGNGTNCGTGCCNN	24	5	7	2193706-2193735|2193754-2193771|2193832-2193861|2193832-2193861|2193880-2193903|2193880-2193903|2193922-2193945	NZ_CP012515.1_2193958-2193987|NZ_CP012515.1_2194090-2194107|NZ_CP012515.1_2193580-2193609|NZ_CP012515.1_2194084-2194113|NZ_CP012515.1_2194006-2194029|NZ_CP012515.1_2194216-2194239|NZ_CP012515.1_2194048-2194071	NA	8	8	Orphan	WYL,DEDDh,DinG,csa3,cas3	NA|128aa|up_0|NZ_CP012515.1_2190886_2191270_-,NA|84aa|down_0|NZ_CP012515.1_2195676_2195928_-,NA|120aa|down_5|NZ_CP012515.1_2201890_2202250_+,NA|257aa|down_8|NZ_CP012515.1_2205204_2205975_-,NA|173aa|down_9|NZ_CP012515.1_2208151_2208670_-	NA|196aa|up_9|NZ_CP012515.1_2179497_2180085_-	pfam06684, AA_synth, Amino acid synthesis	NA|233aa|up_8|NZ_CP012515.1_2180382_2181081_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|102aa|up_7|NZ_CP012515.1_2181878_2182184_-	pfam11876, DUF3396, Protein of unknown function (DUF3396)	NA|357aa|up_6|NZ_CP012515.1_2182599_2183670_+	cd00519, Lipase_3, Lipase (class 3)	NA|103aa|up_5|NZ_CP012515.1_2183926_2184235_-	pfam00816, Histone_HNS, H-NS histone family	NA|119aa|up_4|NZ_CP012515.1_2184329_2184686_-	PRK09935, PRK09935, fimbriae biosynthesis transcriptional regulator FimZ	NA|265aa|up_3|NZ_CP012515.1_2185565_2186360_-	pfam00563, EAL, EAL domain	NA|1083aa|up_2|NZ_CP012515.1_2186686_2189935_-	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC	NA|222aa|up_1|NZ_CP012515.1_2189934_2190600_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|128aa|up_0|NZ_CP012515.1_2190886_2191270_-	NA	NA|84aa|down_0|NZ_CP012515.1_2195676_2195928_-	NA	NA|324aa|down_1|NZ_CP012515.1_2196704_2197676_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|834aa|down_2|NZ_CP012515.1_2197666_2200168_-	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|257aa|down_3|NZ_CP012515.1_2200225_2200996_-	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|177aa|down_4|NZ_CP012515.1_2201094_2201625_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|120aa|down_5|NZ_CP012515.1_2201890_2202250_+	NA	NA|156aa|down_6|NZ_CP012515.1_2202778_2203246_-	pfam08670, MEKHLA, MEKHLA domain	NA|363aa|down_7|NZ_CP012515.1_2203830_2204919_+	pfam10503, Esterase_phd, Esterase PHB depolymerase	NA|257aa|down_8|NZ_CP012515.1_2205204_2205975_-	NA	NA|173aa|down_9|NZ_CP012515.1_2208151_2208670_-	NA
GCF_001277875.1_ASM127787v1	NZ_CP012515	Burkholderia pseudomallei strain vgh16R chromosome 1, complete sequence	2	3998052-3998461	2	CRT	no		WYL,DEDDh,DinG,csa3,cas3	Orphan	GAGTCAGCGCTTCAGCGCTT	20	0	0	NA	NA	NA	8	8	Orphan	WYL,DEDDh,DinG,csa3,cas3	NA|59aa|up_7|NZ_CP012515.1_3989428_3989605_+,NA|65aa|up_1|NZ_CP012515.1_3995472_3995667_-,NA	NA|380aa|up_9|NZ_CP012515.1_3984262_3985402_-	cd06342, PBP1_ABC_LIVBP-like, type 1 periplasmic ligand-binding domain of ABC (Atpase Binding Cassette)-type active transport systems involved in the transport of all three branched chain aliphatic amino acids (leucine, isoleucine and valine)	NA|1310aa|up_8|NZ_CP012515.1_3985486_3989416_-	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|59aa|up_7|NZ_CP012515.1_3989428_3989605_+	NA	NA|756aa|up_6|NZ_CP012515.1_3989880_3992148_-	PRK05580, PRK05580, primosome assembly protein PriA; Validated	NA|365aa|up_5|NZ_CP012515.1_3992588_3993683_-	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|262aa|up_4|NZ_CP012515.1_3993822_3994608_+	cd01069, PBP2_PheC, Cyclohexadienyl dehydratase, a member of the type 2 periplasmic binding fold protein superfamily	NA|114aa|up_3|NZ_CP012515.1_3994807_3995149_-	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|45aa|up_2|NZ_CP012515.1_3995114_3995249_-	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|65aa|up_1|NZ_CP012515.1_3995472_3995667_-	NA	NA|577aa|up_0|NZ_CP012515.1_3995708_3997439_-	PRK08315, PRK08315, AMP-binding domain protein; Validated	NA|465aa|down_0|NZ_CP012515.1_3998618_4000013_-	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|292aa|down_1|NZ_CP012515.1_4000092_4000968_-	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated	NA|514aa|down_2|NZ_CP012515.1_4001039_4002581_-	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated	NA|157aa|down_3|NZ_CP012515.1_4003168_4003639_-	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated	NA|90aa|down_4|NZ_CP012515.1_4003766_4004036_-	PRK06876, PRK06876, F0F1 ATP synthase subunit C; Validated	NA|284aa|down_5|NZ_CP012515.1_4004112_4004964_-	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated	NA|177aa|down_6|NZ_CP012515.1_4005076_4005607_-	pfam03899, ATP-synt_I, ATP synthase I chain	NA|378aa|down_7|NZ_CP012515.1_4005877_4007011_-	cd01117, YbiR_permease, Putative anion permease YbiR	NA|296aa|down_8|NZ_CP012515.1_4007018_4007906_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|257aa|down_9|NZ_CP012515.1_4007941_4008712_-	pfam13614, AAA_31, AAA domain
