The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP009312	Lawsonella clevelandensis strain X1036 chromosome, complete genome	1860551	65873	73175	1860551		Staphylococcus_phage(66.67%)	7	NA	NA
WP_082345553.1|65873_66707_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	33.9	1.1e-05
WP_053962609.1|66824_68753_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_053961316.1|68758_69235_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2I2L4Y7	Orpheovirus	34.8	1.8e-10
WP_063665711.1|69346_70711_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	43.5	2.2e-88
WP_053961317.1|70757_71387_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	43.6	1.7e-40
WP_053978648.1|71472_72069_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	38.8	7.1e-28
WP_082345248.1|72068_73175_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	28.8	4.2e-34
>prophage 2
NZ_CP009312	Lawsonella clevelandensis strain X1036 chromosome, complete genome	1860551	99563	109991	1860551	tRNA	Klosneuvirus(33.33%)	7	NA	NA
WP_053961339.1|99563_102248_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	35.4	1.5e-61
WP_053961340.1|102429_103845_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	43.3	2.6e-84
WP_053978650.1|103865_104999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053961342.1|104991_106800_-|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	36.5	2.3e-05
WP_053961343.1|107029_107932_+	hypothetical protein	NA	A0A1I9SA48	Rhodococcus_phage	43.2	2.6e-45
WP_053978651.1|108038_109319_-|tRNA	histidine--tRNA ligase	tRNA	A0A1V0SLE3	Klosneuvirus	25.6	4.0e-20
WP_158408622.1|109379_109991_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	30.7	1.7e-16
>prophage 3
NZ_CP009312	Lawsonella clevelandensis strain X1036 chromosome, complete genome	1860551	1566822	1575638	1860551	integrase	Gordonia_phage(16.67%)	7	1566244:1566257	1582988:1583001
1566244:1566257	attL	AGCAGCTGGATAAA	NA	NA	NA	NA
WP_148565066.1|1566822_1567563_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0E3XBN7	Gordonia_phage	46.1	5.5e-54
WP_053979118.1|1567874_1568285_-	hypothetical protein	NA	A0A142K826	Mycobacterium_phage	30.7	1.8e-06
WP_053979119.1|1568823_1569210_+	single-stranded DNA-binding protein	NA	G9FH73	Rhodococcus_phage	42.0	4.9e-14
WP_053962395.1|1569244_1570918_+	energy-dependent translational throttle protein EttA	NA	A0A2K9L0W2	Tupanvirus	27.6	4.1e-49
WP_053979120.1|1570963_1571395_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_053979121.1|1571391_1572768_+	site-specific DNA-methyltransferase	NA	A0A220NUF4	Escherichia_phage	29.7	4.8e-27
WP_053979122.1|1572797_1575638_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	32.6	9.5e-38
1582988:1583001	attR	TTTATCCAGCTGCT	NA	NA	NA	NA
