assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001298325.2_ASM129832v2	NZ_CP019945	Staphylococcus aureus strain BA01611 chromosome, complete genome	1	328694-328784	1	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG,WYL	Orphan	GGGCCCACACCCCAACTTGCATTGCCTGTAGAA	33	1	23	328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751|328727-328751	NZ_CP019945.1_218981-218957|NZ_CP019945.1_219039-219015|NZ_CP019945.1_420423-420399|NZ_CP019945.1_859167-859191|NZ_CP019945.1_864601-864625|NZ_CP019945.1_1436745-1436721|NZ_CP019945.1_2083925-2083949|NZ_CP019945.1_2389588-2389612|NZ_CP019945.1_2596075-2596051|NZ_CP019945.1_2596133-2596109|NZ_CP019945.1_2596191-2596167|NZ_CP019945.1_2596249-2596225|NZ_CP019945.1_343970-343946|NZ_CP019945.1_1021437-1021461|NZ_CP019945.1_1220888-1220864|NZ_CP019945.1_1220999-1220975|NZ_CP019945.1_1441038-1441062|NZ_CP019945.1_1525118-1525142|NZ_CP019945.1_1739861-1739885|NZ_CP019945.1_1740034-1740058|NZ_CP019945.1_1836614-1836590|NZ_CP019945.1_2182632-2182608|NZ_CP019945.1_2672340-2672364	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,WYL	NA|49aa|up_4|NZ_CP019945.1_322963_323110_+,NA	NA|312aa|up_9|NZ_CP019945.1_316280_317216_+	cd02651, nuc_hydro_IU_UC_XIUA, nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases	NA|699aa|up_8|NZ_CP019945.1_317553_319650_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|156aa|up_7|NZ_CP019945.1_319634_320102_+	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit	NA|93aa|up_6|NZ_CP019945.1_320124_320403_+	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|352aa|up_5|NZ_CP019945.1_321906_322962_+	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family	NA|49aa|up_4|NZ_CP019945.1_322963_323110_+	NA	NA|348aa|up_3|NZ_CP019945.1_323133_324177_+	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases	NA|239aa|up_2|NZ_CP019945.1_324704_325421_+	PRK13385, PRK13385, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional	NA|342aa|up_1|NZ_CP019945.1_325413_326439_+	cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase	NA|565aa|up_0|NZ_CP019945.1_326460_328155_+	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	NA|390aa|down_0|NZ_CP019945.1_329205_330375_+	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	NA|239aa|down_1|NZ_CP019945.1_330650_331367_+	PRK13385, PRK13385, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional	NA|342aa|down_2|NZ_CP019945.1_331359_332385_+	cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase	NA|563aa|down_3|NZ_CP019945.1_332406_334095_+	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase	NA|574aa|down_4|NZ_CP019945.1_334127_335849_+	pfam18674, TarS_C1, TarS beta-glycosyltransferase C-terminal domain 1	NA|225aa|down_5|NZ_CP019945.1_335992_336667_+	PRK13276, PRK13276, iron-sulfur cluster repair di-iron protein ScdA	NA|585aa|down_6|NZ_CP019945.1_336911_338666_+	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|247aa|down_7|NZ_CP019945.1_338668_339409_+	PRK14084, PRK14084, DNA-binding response regulator	NA|148aa|down_8|NZ_CP019945.1_339521_339965_+	PRK04125, PRK04125, antiholin-like protein LrgA	NA|234aa|down_9|NZ_CP019945.1_339957_340659_+	PRK04288, PRK04288, antiholin-like protein LrgB; Provisional
GCF_001298325.2_ASM129832v2	NZ_CP019945	Staphylococcus aureus strain BA01611 chromosome, complete genome	2	817954-818036	2	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG,WYL	Orphan	CCAATTTCTACAGACAATGCAAGTTGG	27	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,WYL	NA|69aa|up_9|NZ_CP019945.1_804610_804817_+,NA|34aa|down_1|NZ_CP019945.1_819492_819594_+	NA|69aa|up_9|NZ_CP019945.1_804610_804817_+	NA	NA|237aa|up_8|NZ_CP019945.1_804904_805615_+	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]	NA|335aa|up_7|NZ_CP019945.1_805598_806603_+	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|647aa|up_6|NZ_CP019945.1_807076_809017_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|628aa|up_5|NZ_CP019945.1_809287_811171_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|594aa|up_4|NZ_CP019945.1_811182_812964_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|326aa|up_3|NZ_CP019945.1_813185_814163_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|505aa|up_2|NZ_CP019945.1_814155_815670_+	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold	NA|353aa|up_1|NZ_CP019945.1_815909_816968_+	PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional	NA|181aa|up_0|NZ_CP019945.1_817262_817805_+	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]	NA|306aa|down_0|NZ_CP019945.1_818484_819402_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|34aa|down_1|NZ_CP019945.1_819492_819594_+	NA	NA|502aa|down_2|NZ_CP019945.1_819671_821177_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|167aa|down_3|NZ_CP019945.1_821517_822018_-	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only]	NA|289aa|down_4|NZ_CP019945.1_822037_822904_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|133aa|down_5|NZ_CP019945.1_823704_824103_+	COG1780, NrdI, Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism]	NA|702aa|down_6|NZ_CP019945.1_824065_826171_+	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|324aa|down_7|NZ_CP019945.1_826288_827260_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|324aa|down_8|NZ_CP019945.1_827967_828939_+	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]	NA|319aa|down_9|NZ_CP019945.1_828925_829882_+	COG4605, CeuC, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]
GCF_001298325.2_ASM129832v2	NZ_CP019945	Staphylococcus aureus strain BA01611 chromosome, complete genome	3	1117412-1117494	3	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG,WYL	Orphan	TGTTGGGGCCCATCCCCCAACTTGCA	26	1	19	1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468|1117438-1117468	NZ_CP019945.1_218993-218963|NZ_CP019945.1_219051-219021|NZ_CP019945.1_859155-859185|NZ_CP019945.1_864589-864619|NZ_CP019945.1_2083913-2083943|NZ_CP019945.1_2596087-2596057|NZ_CP019945.1_2596145-2596115|NZ_CP019945.1_2596203-2596173|NZ_CP019945.1_2596261-2596231|NZ_CP019945.1_420435-420405|NZ_CP019945.1_1021425-1021455|NZ_CP019945.1_1436757-1436727|NZ_CP019945.1_1525106-1525136|NZ_CP019945.1_1739849-1739879|NZ_CP019945.1_1740022-1740052|NZ_CP019945.1_2389576-2389606|NZ_CP019945.1_2672328-2672358|NZ_CP019945.1_1220900-1220870|NZ_CP019945.1_1221011-1220981	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,WYL	NA,NA	NA|1257aa|up_9|NZ_CP019945.1_1103659_1107430_-	COG4193, LytD, Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]	NA|145aa|up_8|NZ_CP019945.1_1107657_1108092_-	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|157aa|up_7|NZ_CP019945.1_1108246_1108717_-	pfam10804, DUF2538, Protein of unknown function (DUF2538)	NA|406aa|up_6|NZ_CP019945.1_1108764_1109982_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|398aa|up_5|NZ_CP019945.1_1110432_1111626_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|93aa|up_4|NZ_CP019945.1_1112162_1112441_-	COG3125, CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Energy production and conversion]	NA|202aa|up_3|NZ_CP019945.1_1112449_1113055_-	TIGR02897, AA3-600_quinol_oxidase_subunit_III, cytochrome aa3 quinol oxidase, subunit III	NA|663aa|up_2|NZ_CP019945.1_1113044_1115033_-	TIGR02882, cytochrome_aa3_quinol_oxidase_subunit_I, cytochrome aa3 quinol oxidase, subunit I	NA|367aa|up_1|NZ_CP019945.1_1115032_1116133_-	TIGR01432, AA3-600_quinol_oxidase_subunit_II, cytochrome aa3 quinol oxidase, subunit II	NA|106aa|up_0|NZ_CP019945.1_1116702_1117020_-	pfam16403, DUF5011, Domain of unknown function (DUF5011)	NA|287aa|down_0|NZ_CP019945.1_1117942_1118803_-	PRK14175, PRK14175, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|161aa|down_1|NZ_CP019945.1_1119003_1119486_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|375aa|down_2|NZ_CP019945.1_1119472_1120597_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|235aa|down_3|NZ_CP019945.1_1120600_1121305_+	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed	NA|88aa|down_4|NZ_CP019945.1_1121304_1121568_+	COG1828, PurS, Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component [Nucleotide transport and metabolism]	NA|224aa|down_5|NZ_CP019945.1_1121569_1122241_+	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|730aa|down_6|NZ_CP019945.1_1122233_1124423_+	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|495aa|down_7|NZ_CP019945.1_1124401_1125886_+	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional	NA|343aa|down_8|NZ_CP019945.1_1125878_1126907_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|189aa|down_9|NZ_CP019945.1_1126909_1127476_+	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
GCF_001298325.2_ASM129832v2	NZ_CP019945	Staphylococcus aureus strain BA01611 chromosome, complete genome	4	1704457-1704544	4	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG,WYL	Orphan	CTTTTCGTCAGCTTCTATGTTGGGGCCCCA	30	1	10	1704487-1704514|1704487-1704514|1704487-1704514|1704487-1704514|1704487-1704514|1704487-1704514|1704487-1704514|1704487-1704514|1704487-1704514|1704487-1704514	NZ_CP019945.1_420334-420307|NZ_CP019945.1_864521-864548|NZ_CP019945.1_871844-871871|NZ_CP019945.1_1001256-1001229|NZ_CP019945.1_1117483-1117510|NZ_CP019945.1_1220855-1220828|NZ_CP019945.1_1304664-1304637|NZ_CP019945.1_1525035-1525062|NZ_CP019945.1_2082558-2082585|NZ_CP019945.1_2093251-2093278	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,WYL	NA,NA	NA|228aa|up_9|NZ_CP019945.1_1693637_1694321_-	COG1030, NfeD, Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]	NA|59aa|up_8|NZ_CP019945.1_1694564_1694741_-	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|449aa|up_7|NZ_CP019945.1_1695033_1696380_-	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|251aa|up_6|NZ_CP019945.1_1696386_1697139_-	COG1385, COG1385, Uncharacterized protein conserved in bacteria [Function unknown]	NA|313aa|up_5|NZ_CP019945.1_1697140_1698079_-	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	NA|380aa|up_4|NZ_CP019945.1_1698082_1699222_-	PRK14280, PRK14280, molecular chaperone DnaJ	NA|611aa|up_3|NZ_CP019945.1_1699357_1701190_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|209aa|up_2|NZ_CP019945.1_1701258_1701885_-	PRK14140, PRK14140, heat shock protein GrpE; Provisional	NA|326aa|up_1|NZ_CP019945.1_1701916_1702894_-	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA	NA|375aa|up_0|NZ_CP019945.1_1702994_1704119_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|608aa|down_0|NZ_CP019945.1_1704681_1706505_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|84aa|down_1|NZ_CP019945.1_1706850_1707102_+	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|325aa|down_2|NZ_CP019945.1_1707146_1708121_-	PRK05574, holA, DNA polymerase III subunit delta; Reviewed	NA|734aa|down_3|NZ_CP019945.1_1708177_1710379_-	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|154aa|down_4|NZ_CP019945.1_1710383_1710845_-	TIGR02571, putative_dCMP_deaminase, ComE operon protein 2	NA|229aa|down_5|NZ_CP019945.1_1710936_1711623_-	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair]	NA|239aa|down_6|NZ_CP019945.1_1711662_1712379_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|118aa|down_7|NZ_CP019945.1_1712381_1712735_-	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown]	NA|195aa|down_8|NZ_CP019945.1_1712735_1713320_-	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism]	NA|190aa|down_9|NZ_CP019945.1_1713309_1713879_-	TIGR00482, Probable_nicotinate-nucleotide_adenylyltransferase, nicotinate (nicotinamide) nucleotide adenylyltransferase
GCF_001298325.2_ASM129832v2	NZ_CP019945	Staphylococcus aureus strain BA01611 chromosome, complete genome	5	1834295-1834381	5	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG,WYL	Orphan	ATGCAAGTTGGGGTGGGGCCCCAACATAGA	30	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,WYL	NA,NA|38aa|down_4|NZ_CP019945.1_1838831_1838945_-	NA|423aa|up_9|NZ_CP019945.1_1816695_1817964_-	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed	NA|374aa|up_8|NZ_CP019945.1_1818012_1819134_-	PRK14035, PRK14035, citrate synthase; Provisional	NA|454aa|up_7|NZ_CP019945.1_1819481_1820843_+	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|586aa|up_6|NZ_CP019945.1_1823167_1824925_-	PRK06354, PRK06354, pyruvate kinase; Provisional	NA|323aa|up_5|NZ_CP019945.1_1824946_1825915_-	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|315aa|up_4|NZ_CP019945.1_1826183_1827128_-	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|286aa|up_3|NZ_CP019945.1_1827127_1827985_-	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|410aa|up_2|NZ_CP019945.1_1828179_1829409_-	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|1066aa|up_1|NZ_CP019945.1_1829858_1833056_-	COG0587, DnaE, DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]	NA|314aa|up_0|NZ_CP019945.1_1833076_1834018_-	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|433aa|down_0|NZ_CP019945.1_1834471_1835770_-	COG4109, COG4109, Predicted transcriptional regulator containing CBS domains [Transcription]	NA|138aa|down_1|NZ_CP019945.1_1835974_1836388_+	pfam00582, Usp, Universal stress protein family	NA|230aa|down_2|NZ_CP019945.1_1836833_1837523_-	PRK00685, PRK00685, metal-dependent hydrolase; Provisional	NA|352aa|down_3|NZ_CP019945.1_1837697_1838753_+	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|38aa|down_4|NZ_CP019945.1_1838831_1838945_-	NA	NA|373aa|down_5|NZ_CP019945.1_1839068_1840187_-	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|167aa|down_6|NZ_CP019945.1_1840327_1840828_+	pfam00582, Usp, Universal stress protein family	NA|401aa|down_7|NZ_CP019945.1_1841073_1842276_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|316aa|down_8|NZ_CP019945.1_1842363_1843311_-	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|165aa|down_9|NZ_CP019945.1_1843433_1843928_-	PRK00522, tpx, thiol peroxidase
GCF_001298325.2_ASM129832v2	NZ_CP019945	Staphylococcus aureus strain BA01611 chromosome, complete genome	6	2002542-2002669	6	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG,WYL	Orphan	AATTATGGAGCGGAAGATAGGATTTACACCTATACCTC	38	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,WYL	NA|132aa|up_7|NZ_CP019945.1_1994466_1994862_-,NA|51aa|up_6|NZ_CP019945.1_1995697_1995850_-,NA|31aa|down_5|NZ_CP019945.1_2015532_2015625_-	NA|274aa|up_9|NZ_CP019945.1_1991612_1992434_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|462aa|up_8|NZ_CP019945.1_1992885_1994271_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|132aa|up_7|NZ_CP019945.1_1994466_1994862_-	NA	NA|51aa|up_6|NZ_CP019945.1_1995697_1995850_-	NA	NA|200aa|up_5|NZ_CP019945.1_1995874_1996474_-	COG0363, NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]	NA|157aa|up_4|NZ_CP019945.1_1996632_1997103_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|376aa|up_3|NZ_CP019945.1_1997107_1998235_-	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|241aa|up_2|NZ_CP019945.1_1998385_1999108_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|486aa|up_1|NZ_CP019945.1_1999100_2000558_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|354aa|up_0|NZ_CP019945.1_2000815_2001877_-	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only]	NA|149aa|down_0|NZ_CP019945.1_2010731_2011178_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|317aa|down_1|NZ_CP019945.1_2011274_2012225_-	cd12155, PGDH_1, Phosphoglycerate Dehydrogenase, 2-hydroxyacid dehydrogenase family	NA|152aa|down_2|NZ_CP019945.1_2012230_2012686_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|430aa|down_3|NZ_CP019945.1_2012766_2014056_+	PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional	NA|365aa|down_4|NZ_CP019945.1_2014348_2015443_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|31aa|down_5|NZ_CP019945.1_2015532_2015625_-	NA	NA|579aa|down_6|NZ_CP019945.1_2015633_2017370_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|181aa|down_7|NZ_CP019945.1_2017661_2018204_-	PRK13662, PRK13662, hypothetical protein; Provisional	NA|346aa|down_8|NZ_CP019945.1_2018505_2019543_-	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|326aa|down_9|NZ_CP019945.1_2019694_2020672_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]
GCF_001298325.2_ASM129832v2	NZ_CP019945	Staphylococcus aureus strain BA01611 chromosome, complete genome	7	2288512-2288601	7	CRISPRCasFinder	no	csa3	csa3,cas3,DEDDh,DinG,WYL	Type I-A	CAACTTTAGTTGTTAGGGGCTCTT	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,WYL	NA|77aa|up_5|NZ_CP019945.1_2283383_2283614_-,NA|364aa|up_0|NZ_CP019945.1_2287403_2288495_+,NA|35aa|down_0|NZ_CP019945.1_2288936_2289041_-,NA|53aa|down_1|NZ_CP019945.1_2289720_2289879_+	NA|237aa|up_9|NZ_CP019945.1_2278994_2279705_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NZ_CP019945.1_2279825_2280269_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NZ_CP019945.1_2280468_2280882_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NZ_CP019945.1_2281338_2282712_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NZ_CP019945.1_2283383_2283614_-	NA	NA|313aa|up_4|NZ_CP019945.1_2283644_2284583_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NZ_CP019945.1_2285018_2285684_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NZ_CP019945.1_2285835_2286156_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|NZ_CP019945.1_2286157_2287138_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NZ_CP019945.1_2287403_2288495_+	NA	NA|35aa|down_0|NZ_CP019945.1_2288936_2289041_-	NA	NA|53aa|down_1|NZ_CP019945.1_2289720_2289879_+	NA	NA|286aa|down_2|NZ_CP019945.1_2290536_2291394_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_3|NZ_CP019945.1_2291461_2292244_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_4|NZ_CP019945.1_2292475_2294281_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_5|NZ_CP019945.1_2294961_2296500_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_6|NZ_CP019945.1_2296534_2298667_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_7|NZ_CP019945.1_2298678_2299113_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_8|NZ_CP019945.1_2299112_2300219_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|2483aa|down_9|NZ_CP019945.1_2300537_2307986_-	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain
GCF_001298325.2_ASM129832v2	NZ_CP019945	Staphylococcus aureus strain BA01611 chromosome, complete genome	8	2300842-2300927	8	CRISPRCasFinder	no	csa3	csa3,cas3,DEDDh,DinG,WYL	Type I-A	CCAACTGATTTTTGCGTATCATTAGT	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,WYL	NA|364aa|up_9|NZ_CP019945.1_2287403_2288495_+,NA|35aa|up_8|NZ_CP019945.1_2288936_2289041_-,NA|53aa|up_7|NZ_CP019945.1_2289720_2289879_+,NA	NA|364aa|up_9|NZ_CP019945.1_2287403_2288495_+	NA	NA|35aa|up_8|NZ_CP019945.1_2288936_2289041_-	NA	NA|53aa|up_7|NZ_CP019945.1_2289720_2289879_+	NA	NA|286aa|up_6|NZ_CP019945.1_2290536_2291394_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|up_5|NZ_CP019945.1_2291461_2292244_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|up_4|NZ_CP019945.1_2292475_2294281_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|up_3|NZ_CP019945.1_2294961_2296500_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|up_2|NZ_CP019945.1_2296534_2298667_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|up_1|NZ_CP019945.1_2298678_2299113_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|up_0|NZ_CP019945.1_2299112_2300219_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|452aa|down_0|NZ_CP019945.1_2308262_2309618_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional	NA|311aa|down_1|NZ_CP019945.1_2309644_2310577_-	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown]	NA|270aa|down_2|NZ_CP019945.1_2310578_2311388_-	COG1624, COG1624, Uncharacterized conserved protein [Function unknown]	NA|303aa|down_3|NZ_CP019945.1_2311576_2312485_-	cd09989, Arginase, Arginase family	NA|355aa|down_4|NZ_CP019945.1_2318617_2319682_-	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|481aa|down_5|NZ_CP019945.1_2319829_2321272_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|158aa|down_6|NZ_CP019945.1_2321594_2322068_-	pfam17080, SepA, Multidrug Resistance efflux pump	NA|448aa|down_7|NZ_CP019945.1_2322166_2323510_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|228aa|down_8|NZ_CP019945.1_2323688_2324372_-	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only]	NA|396aa|down_9|NZ_CP019945.1_2324390_2325578_-	cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc
