The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP012541	Campylobacter concisus strain ATCC 33237 chromosome, complete genome	1840041	16659	26542	1840041		Escherichia_phage(16.67%)	9	NA	NA
WP_054195865.1|16659_19101_+	molybdopterin-dependent oxidoreductase	NA	A0A077SK27	Escherichia_phage	27.4	3.0e-56
WP_054195866.1|19132_19441_-	YolD-like family protein	NA	NA	NA	NA	NA
WP_054195867.1|19430_20693_-	DNA repair protein	NA	M1Q231	Streptococcus_phage	33.1	2.6e-51
WP_054195868.1|20959_21574_+	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_054195869.1|21622_22690_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	40.1	1.6e-67
WP_054195870.1|22698_23370_-	ribonuclease III	NA	A0A2K9L8W0	Tupanvirus	33.5	5.4e-24
WP_054195871.1|23366_23801_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	43.2	4.4e-27
WP_054195872.1|23778_24804_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_054197356.1|24865_26542_+	DNA primase	NA	A0A1S5RH70	Helicobacter_phage	33.7	3.1e-52
>prophage 2
NZ_CP012541	Campylobacter concisus strain ATCC 33237 chromosome, complete genome	1840041	131085	139758	1840041		Hokovirus(16.67%)	8	NA	NA
WP_054195947.1|131085_132456_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	32.5	2.8e-59
WP_054195948.1|132459_133602_+	GDP-mannose 4,6-dehydratase	NA	M1HKK4	Acanthocystis_turfacea_Chlorella_virus	61.6	6.4e-126
WP_054195949.1|133605_134667_+	GDP-L-fucose synthase	NA	D1LW79	Prochlorococcus_phage	49.9	2.3e-90
WP_054197360.1|134663_135434_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_054197361.1|135430_136534_+	CDP-glucose 4,6-dehydratase	NA	J7Q7J8	Aeropyrum_coil-shaped_virus	30.4	4.2e-18
WP_054195950.1|136530_137400_+	NAD-dependent epimerase/dehydratase	NA	NA	NA	NA	NA
WP_054195951.1|137401_138745_+	lipopolysaccharide biosynthesis protein RfbH	NA	A0A218MN59	uncultured_virus	36.0	2.0e-70
WP_054195952.1|138741_139758_+	GDP-mannose 4,6-dehydratase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	26.1	3.4e-22
>prophage 3
NZ_CP012541	Campylobacter concisus strain ATCC 33237 chromosome, complete genome	1840041	1039727	1127919	1840041	tRNA,integrase,portal,capsid,protease,transposase,tail,plate	Campylobacter_phage(15.38%)	103	1069831:1069850	1111932:1111951
WP_054196700.1|1039727_1041149_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_054196701.1|1041313_1041997_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_054196702.1|1042062_1042824_-	TSUP family transporter	NA	NA	NA	NA	NA
WP_021091394.1|1042978_1043515_-	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	51.7	9.5e-40
WP_054196703.1|1043581_1044349_-	TIGR02757 family protein	NA	NA	NA	NA	NA
WP_054196704.1|1044345_1046217_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_021091397.1|1046220_1046652_-	flagellar export chaperone FlgN	NA	NA	NA	NA	NA
WP_069174579.1|1046665_1046869_-	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_054196705.1|1046927_1047227_-	rod-binding protein	NA	NA	NA	NA	NA
WP_054196706.1|1047226_1048279_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_054196707.1|1048348_1048915_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_054196708.1|1048911_1049256_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196709.1|1049376_1049772_+	flagellar protein FlaG	NA	NA	NA	NA	NA
WP_054196710.1|1049774_1051535_+	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
WP_054196711.1|1051544_1051916_+	flagellar export chaperone FliS	NA	NA	NA	NA	NA
WP_054196712.1|1051908_1052136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_054196713.1|1052623_1053241_-	Type 1 glutamine amidotransferase-like domain-containing protein	NA	NA	NA	NA	NA
WP_054196715.1|1053694_1054819_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_054196716.1|1054796_1055618_-	thiamine-phosphate kinase	NA	NA	NA	NA	NA
WP_054196717.1|1055679_1056693_+	hypothetical protein	NA	NA	NA	NA	NA
WP_054196718.1|1056704_1057145_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196719.1|1057141_1058566_-	UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase	NA	NA	NA	NA	NA
WP_054196720.1|1058562_1059348_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_021091404.1|1059337_1059568_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_054196721.1|1059632_1060673_-	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
WP_054196722.1|1060683_1061238_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_054196723.1|1061255_1063169_-	DUF342 domain-containing protein	NA	NA	NA	NA	NA
WP_054196724.1|1063292_1064693_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_054196725.1|1064679_1066074_+|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	31.4	4.1e-50
WP_054196726.1|1066066_1067791_+	ABC transporter ATP-binding protein	NA	A0A076FI99	Aureococcus_anophage	22.9	3.5e-27
WP_054197406.1|1067844_1068918_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_054196727.1|1068929_1070171_+	insulinase family protein	NA	A0A2P1EIE5	Megavirus	26.8	4.9e-31
1069831:1069850	attL	AAAATTTATTTATATTTTTA	NA	NA	NA	NA
WP_072594331.1|1070173_1071067_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_054196728.1|1071066_1071855_+	enoyl-ACP reductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	27.2	8.3e-08
WP_054196729.1|1071888_1072434_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_054196730.1|1072629_1073739_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_081004438.1|1073738_1074374_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_054196731.1|1074469_1075039_-	ComF family protein	NA	NA	NA	NA	NA
WP_054196732.1|1075038_1075596_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196733.1|1075607_1076330_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009294206.1|1076323_1076554_-	2-hydroxymuconate tautomerase family protein	NA	NA	NA	NA	NA
WP_054196734.1|1076769_1078560_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	25.8	1.3e-24
WP_054196735.1|1079336_1080308_-|tail	phage tail protein	tail	A0A219Y9Y2	Aeromonas_phage	27.9	2.7e-16
WP_021090294.1|1080301_1080493_-|tail	tail protein X	tail	NA	NA	NA	NA
WP_054196736.1|1080485_1080860_-|tail	phage tail protein	tail	Q9ZXJ9	Pseudomonas_virus	29.4	9.7e-07
WP_054196737.1|1080861_1083090_-|tail	phage tail tape measure protein	tail	A7YGZ1	Campylobacter_phage	28.5	3.8e-42
WP_155463277.1|1083138_1083306_+	hypothetical protein	NA	NA	NA	NA	NA
WP_054196738.1|1083423_1083648_-|tail	phage tail assembly protein	tail	A7YGZ3	Campylobacter_phage	47.4	5.8e-07
WP_054196739.1|1083721_1084234_-|tail	phage major tail tube protein	tail	A7YGZ4	Campylobacter_phage	46.7	1.1e-34
WP_054196740.1|1084246_1085410_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A7YGY2	Campylobacter_phage	45.1	1.1e-80
WP_054196741.1|1085412_1086051_-	hypothetical protein	NA	A0A0N9S0S4	Escherichia_phage	30.3	1.5e-07
WP_169748877.1|1086034_1086202_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196742.1|1086198_1086465_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196743.1|1086461_1086761_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196744.1|1086775_1088263_-|tail	phage tail protein	tail	A0A0M3ULF6	Salmonella_phage	40.3	5.2e-19
WP_054196745.1|1088274_1088895_-|tail	phage tail protein I	tail	A0A2K9V471	Faecalibacterium_phage	35.0	4.4e-12
WP_054196746.1|1088891_1089974_-|plate	baseplate J/gp47 family protein	plate	D5LGZ3	Escherichia_phage	27.3	1.3e-19
WP_054196747.1|1090083_1090368_-	GPW/gp25 family protein	NA	Q75QM0	Wolbachia_phage	45.2	6.4e-11
WP_054196748.1|1090370_1090982_-|plate	phage baseplate assembly protein V	plate	A0A1B2LRU5	Wolbachia_phage	36.0	2.4e-10
WP_054196749.1|1090974_1091358_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054197409.1|1091347_1091575_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196750.1|1091577_1091922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196751.1|1091905_1092343_-	glycoside hydrolase family protein	NA	A0A2H4YFB5	Aeromonas_phage	36.1	2.4e-17
WP_054196752.1|1092339_1092702_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196753.1|1092698_1093007_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196754.1|1093003_1093342_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196755.1|1093353_1094253_-|capsid	P2 family phage major capsid protein	capsid	NA	NA	NA	NA
WP_054197410.1|1094252_1095017_-	hypothetical protein	NA	A5GYL8	Lactococcus_phage	45.2	5.0e-26
WP_107956213.1|1095378_1096278_+|portal	phage portal protein	portal	E5E3S7	Burkholderia_phage	29.4	8.5e-09
WP_054196757.1|1096376_1097945_+	hypothetical protein	NA	A0A2P9JZI8	Alteromonadaceae_phage	31.1	3.1e-38
WP_054196758.1|1098063_1098867_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196759.1|1098892_1099327_-	HK97 gp10 family phage protein	NA	D4P800	Rhodococcus_phage	43.3	2.9e-10
WP_054196760.1|1099336_1099570_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196761.1|1099566_1100784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196762.1|1100776_1100977_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196763.1|1101008_1101452_-	DUF1018 domain-containing protein	NA	NA	NA	NA	NA
WP_054196764.1|1101448_1101655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196765.1|1101644_1101977_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155463279.1|1101995_1102163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196766.1|1102223_1102634_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196767.1|1102714_1103194_-	DUF4406 domain-containing protein	NA	NA	NA	NA	NA
WP_054196768.1|1103369_1103567_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196769.1|1103571_1104441_-	AAA family ATPase	NA	F6MII7	Haemophilus_phage	31.4	3.1e-32
WP_054196770.1|1104452_1106912_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_167496274.1|1106912_1107083_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081004441.1|1107322_1108066_+	helix-turn-helix domain-containing protein	NA	M5A9D2	Nitratiruptor_phage	45.0	1.3e-23
WP_054196771.1|1108603_1109476_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196772.1|1109625_1110000_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_054196773.1|1110795_1111212_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_054196774.1|1111364_1111808_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_054196775.1|1117537_1118878_-	DUF945 family protein	NA	NA	NA	NA	NA
1111932:1111951	attR	TAAAAATATAAATAAATTTT	NA	NA	NA	NA
WP_054196776.1|1118874_1119441_-	DedA family protein	NA	NA	NA	NA	NA
WP_054196777.1|1119440_1120037_-	lipid-binding SYLF domain-containing protein	NA	NA	NA	NA	NA
WP_035167447.1|1120046_1121600_-	ribonuclease Y	NA	NA	NA	NA	NA
WP_054196778.1|1121520_1122165_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_169748892.1|1122388_1122847_+	redoxin family protein	NA	NA	NA	NA	NA
WP_054196780.1|1122846_1123713_+	signal recognition particle-docking protein FtsY	NA	D6PHS7	uncultured_phage	37.9	1.3e-14
WP_054196781.1|1123705_1124068_+	VanZ family protein	NA	NA	NA	NA	NA
WP_054196782.1|1124042_1125383_+	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_087585350.1|1125528_1125771_-	hypothetical protein	NA	NA	NA	NA	NA
WP_054196784.1|1126500_1126845_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_021091240.1|1126841_1127378_-	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_054196785.1|1127436_1127919_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
