The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011853	Gordonia phthalatica strain QH-11 chromosome, complete genome	4428727	58589	110160	4428727	transposase,protease	Mycobacterium_phage(21.43%)	44	NA	NA
WP_101852925.1|58589_59558_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_024476692.1|59788_61396_-	recombinase family protein	NA	A0A2P1JZS6	Mycobacterium_phage	28.1	6.2e-26
WP_062391172.1|62861_64253_+|transposase	IS1380 family transposase	transposase	A0A222ZN33	Mycobacterium_phage	54.0	1.0e-117
WP_062391173.1|64392_64638_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062391174.1|64948_66292_-	DUF1254 domain-containing protein	NA	NA	NA	NA	NA
WP_062391175.1|66507_67449_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_162234635.1|67638_68577_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_062391177.1|68933_70046_+	NDMA-dependent alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	30.2	2.0e-31
WP_062391178.1|70085_71537_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_062391179.1|71606_72803_+	thiolase family protein	NA	NA	NA	NA	NA
WP_082399278.1|72807_73119_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_062391172.1|73200_74592_+|transposase	IS1380 family transposase	transposase	A0A222ZN33	Mycobacterium_phage	54.0	1.0e-117
WP_157850971.1|74643_76101_+	SIR2 family protein	NA	Q38324	Lactococcus_phage	22.6	1.6e-12
WP_157850972.1|76097_76967_+	sce7726 family protein	NA	NA	NA	NA	NA
WP_157850973.1|76953_77892_+	sce7725 family protein	NA	NA	NA	NA	NA
WP_157850974.1|77992_78346_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062391184.1|78441_79467_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157850975.1|79908_80397_-	LppP/LprE family lipoprotein	NA	NA	NA	NA	NA
WP_082399850.1|80589_80973_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_062391187.1|81057_82920_-	DUF3556 domain-containing protein	NA	NA	NA	NA	NA
WP_062391188.1|82929_84393_-	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	27.9	2.0e-39
WP_062391189.1|84405_85176_-	glucose 1-dehydrogenase	NA	W8CYX9	Bacillus_phage	35.5	8.9e-07
WP_193392927.1|85390_86683_+	PucR family transcriptional regulator	NA	NA	NA	NA	NA
WP_062391190.1|86706_87075_-	PLDc N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_062391191.1|87236_88238_+	diaminopimelate dehydrogenase	NA	NA	NA	NA	NA
WP_062394784.1|88338_89208_+	universal stress protein	NA	NA	NA	NA	NA
WP_062391192.1|89315_90743_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_157850976.1|90873_91695_-	DUF4190 domain-containing protein	NA	NA	NA	NA	NA
WP_193392928.1|91718_91871_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062391194.1|91939_92470_+	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	41.4	6.8e-22
WP_082399280.1|92471_93341_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_062391196.1|93380_93836_-	PH domain-containing protein	NA	NA	NA	NA	NA
WP_062391197.1|93895_94174_-	cell division protein CrgA	NA	NA	NA	NA	NA
WP_062391198.1|94229_94883_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	46.4	7.0e-45
WP_062391199.1|94895_96818_-	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	V5L5T2	Insectomime_virus	31.0	1.1e-16
WP_062391200.1|96824_98183_-	serine/threonine protein kinase	NA	A0A1E1EXG0	Acanthamoeba_castellanii_mimivirus	23.6	2.0e-09
WP_062391201.1|98179_99682_-	penicillin-binding protein 2	NA	NA	NA	NA	NA
WP_062391202.1|99678_101103_-	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA	NA
WP_062391203.1|101099_102530_-	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
WP_062391204.1|102526_102991_-	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_193392929.1|103092_104514_-	DUF3662 domain-containing protein	NA	NA	NA	NA	NA
WP_062391206.1|106700_107453_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	27.2	6.7e-15
WP_062391207.1|107452_109039_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	35.9	5.5e-67
WP_062391209.1|109428_110160_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	40.8	1.4e-41
>prophage 2
NZ_CP011853	Gordonia phthalatica strain QH-11 chromosome, complete genome	4428727	3557923	3588817	4428727	integrase,protease,transposase,terminase,portal,capsid	Corynebacterium_phage(20.0%)	38	3556828:3556844	3583673:3583689
3556828:3556844	attL	GCCGGGCTGCGGCAGGC	NA	NA	NA	NA
WP_062393909.1|3557923_3558793_-|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
WP_062393910.1|3558915_3559935_-	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_062393911.1|3560035_3561295_+	geranylgeranyl reductase family protein	NA	NA	NA	NA	NA
WP_062393912.1|3561345_3562059_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_062393913.1|3562069_3562498_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062393914.1|3562494_3564186_-	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_062393915.1|3564251_3564869_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_062393916.1|3564929_3566177_+	saccharopine dehydrogenase NADP-binding domain-containing protein	NA	NA	NA	NA	NA
WP_082399932.1|3566238_3567114_-	DUF559 domain-containing protein	NA	NA	NA	NA	NA
WP_062395556.1|3567262_3567919_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_062393918.1|3567965_3568640_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_062393919.1|3568644_3569421_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_062393920.1|3569446_3570535_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_062395557.1|3570679_3571306_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_062393921.1|3571310_3572246_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_082399740.1|3572242_3573430_-|integrase	site-specific integrase	integrase	A0A1P8D5R0	Corynebacterium_phage	23.9	4.0e-22
WP_062393922.1|3573413_3573875_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_062393923.1|3573961_3574183_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_157851081.1|3574179_3574344_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062393924.1|3574336_3574819_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062393925.1|3574815_3575142_+	DUF2742 domain-containing protein	NA	NA	NA	NA	NA
WP_062393926.1|3575138_3576152_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_062393927.1|3576151_3576364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062393928.1|3576360_3576597_+	hypothetical protein	NA	NA	NA	NA	NA
WP_120298756.1|3576593_3576998_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_062393929.1|3576994_3577369_+	HNH endonuclease	NA	R4JQQ9	Mycobacterium_phage	53.8	9.3e-18
WP_062393930.1|3577368_3578835_+|terminase	terminase	terminase	K4I089	Streptomyces_virus	37.0	7.8e-52
WP_062393931.1|3578831_3580112_+|portal	phage portal protein	portal	A0A2H4JAT8	uncultured_Caudovirales_phage	32.3	1.2e-45
WP_157851082.1|3580216_3580693_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062393933.1|3580689_3581127_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062393934.1|3581450_3582296_+|capsid	phage major capsid protein	capsid	D6PFS1	uncultured_phage	23.6	7.0e-05
WP_062393935.1|3582295_3582613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062393936.1|3582609_3582948_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062393937.1|3583134_3584172_-	glycosyltransferase	NA	NA	NA	NA	NA
3583673:3583689	attR	GCCTGCCGCAGCCCGGC	NA	NA	NA	NA
WP_062393938.1|3584171_3585341_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062393939.1|3585337_3586609_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_157851083.1|3586605_3587730_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082399748.1|3587767_3588817_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP011853	Gordonia phthalatica strain QH-11 chromosome, complete genome	4428727	4085994	4111789	4428727	transposase,integrase	Staphylococcus_phage(25.0%)	21	4105687:4105701	4114210:4114224
WP_082399748.1|4085994_4087044_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_062394392.1|4087282_4087561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_193392986.1|4087726_4088746_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	29.9	1.0e-26
WP_119699221.1|4089016_4090528_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	27.6	7.1e-16
WP_062394395.1|4090524_4091313_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.3	5.7e-33
WP_075844772.1|4091756_4092500_+	DUF4839 domain-containing protein	NA	NA	NA	NA	NA
WP_006898340.1|4093854_4094511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157851102.1|4094783_4095614_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_062394399.1|4096919_4097288_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_062394401.1|4097291_4097864_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_062392907.1|4098138_4099056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006896186.1|4100498_4100975_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_006896187.1|4101089_4101716_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_006896188.1|4101802_4104844_+	MMPL family transporter	NA	NA	NA	NA	NA
WP_006896189.1|4104882_4106106_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
4105687:4105701	attL	GAGGTCGTTGCGATG	NA	NA	NA	NA
WP_120298844.1|4106058_4107309_+	metallophosphoesterase	NA	NA	NA	NA	NA
WP_120298718.1|4107271_4108541_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	31.7	9.2e-25
WP_193392899.1|4108612_4108783_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062395269.1|4108794_4110255_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062392913.1|4110275_4110641_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_062392914.1|4110637_4111789_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
4114210:4114224	attR	CATCGCAACGACCTC	NA	NA	NA	NA
