assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001307275.1_ASM130727v1	NZ_CP012831	Pseudomonas fluorescens strain FW300-N2C3 chromosome, complete genome	1	977970-978075	1	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,WYL	Orphan	TACATATGACCTGTGGGAGCAAAGCT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,WYL	NA,NA	NA|188aa|up_9|NZ_CP012831.1_963043_963607_+	PRK10903, PRK10903, peptidylprolyl isomerase A	NA|611aa|up_8|NZ_CP012831.1_963691_965524_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|375aa|up_7|NZ_CP012831.1_965663_966788_-	pfam04339, FemAB_like, Peptidogalycan biosysnthesis/recognition	NA|437aa|up_6|NZ_CP012831.1_966929_968240_-	COG3746, OprP, Phosphate-selective porin [Inorganic ion transport and metabolism]	NA|79aa|up_5|NZ_CP012831.1_968528_968765_-	pfam13490, zf-HC2, Putative zinc-finger	NA|204aa|up_4|NZ_CP012831.1_968758_969370_-	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|374aa|up_3|NZ_CP012831.1_969562_970684_-	PRK07515, PRK07515, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed	NA|1304aa|up_2|NZ_CP012831.1_971013_974925_-	TIGR01967, ATP-dependent_RNA_helicase_HrpA, RNA helicase HrpA	NA|574aa|up_1|NZ_CP012831.1_975154_976876_-	PRK02946, aceK, bifunctional isocitrate dehydrogenase kinase/phosphatase protein; Validated	NA|303aa|up_0|NZ_CP012831.1_977006_977915_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|288aa|down_0|NZ_CP012831.1_978116_978980_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|313aa|down_1|NZ_CP012831.1_979319_980258_-	NF033391, lipid_A_LpxO, lipid A hydroxylase LpxO	NA|325aa|down_2|NZ_CP012831.1_980611_981586_-	TIGR01139, Cysteine_synthase, cysteine synthase A	NA|359aa|down_3|NZ_CP012831.1_981733_982810_+	pfam05359, DUF748, Domain of Unknown Function (DUF748)	NA|282aa|down_4|NZ_CP012831.1_983051_983897_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|393aa|down_5|NZ_CP012831.1_983931_985110_+	COG3825, COG3825, Uncharacterized protein conserved in bacteria [Function unknown]	NA|307aa|down_6|NZ_CP012831.1_985214_986135_-	smart00797, AHS2, Allophanate hydrolase subunit 2	NA|235aa|down_7|NZ_CP012831.1_986131_986836_-	smart00796, AHS1, Allophanate hydrolase subunit 1	NA|251aa|down_8|NZ_CP012831.1_986832_987585_-	PRK05406, PRK05406, 5-oxoprolinase subunit PxpA	NA|429aa|down_9|NZ_CP012831.1_987649_988936_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily
GCF_001307275.1_ASM130727v1	NZ_CP012831	Pseudomonas fluorescens strain FW300-N2C3 chromosome, complete genome	2	1101732-1101825	2	CRISPRCasFinder	no	csa3	cas3,DEDDh,csa3,DinG,WYL	Type I-A	TCGCGAGCAAGCTCGCTCCCACA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,WYL	NA|172aa|up_4|NZ_CP012831.1_1093252_1093768_+,NA	NA|264aa|up_9|NZ_CP012831.1_1088705_1089497_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|195aa|up_8|NZ_CP012831.1_1089617_1090202_-	COG3124, COG3124, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|101aa|up_7|NZ_CP012831.1_1090361_1090664_+	COG0640, ArsR, Predicted transcriptional regulators [Transcription]	NA|389aa|up_6|NZ_CP012831.1_1090681_1091848_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|350aa|up_5|NZ_CP012831.1_1091880_1092930_+	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain	NA|172aa|up_4|NZ_CP012831.1_1093252_1093768_+	NA	NA|211aa|up_3|NZ_CP012831.1_1093981_1094614_-	PRK10668, PRK10668, DNA-binding transcriptional repressor AcrR; Provisional	NA|386aa|up_2|NZ_CP012831.1_1094883_1096041_+	NF000247, MexA, MexA family multidrug efflux RND transporter periplasmic adaptor subunit	NA|1055aa|up_1|NZ_CP012831.1_1096044_1099209_+	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|486aa|up_0|NZ_CP012831.1_1099205_1100663_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|418aa|down_0|NZ_CP012831.1_1102087_1103341_+	pfam03573, OprD, outer membrane porin, OprD family	NA|131aa|down_1|NZ_CP012831.1_1103547_1103940_-	TIGR02425, putative_gamma-carboxymuconolactone_decarboxylase, 4-carboxymuconolactone decarboxylase	NA|272aa|down_2|NZ_CP012831.1_1103950_1104766_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|455aa|down_3|NZ_CP012831.1_1104778_1106143_-	PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional	NA|433aa|down_4|NZ_CP012831.1_1106188_1107487_-	PRK10406, PRK10406, alpha-ketoglutarate transporter; Provisional	NA|189aa|down_5|NZ_CP012831.1_1107818_1108385_-	cd03463, 3,4-PCD_alpha, Protocatechuate 3,4-dioxygenase (3,4-PCD) , alpha subunit	NA|235aa|down_6|NZ_CP012831.1_1108386_1109091_-	cd03464, 3,4-PCD_beta, Protocatechuate 3,4-dioxygenase (3,4-PCD) , beta subunit	NA|401aa|down_7|NZ_CP012831.1_1109128_1110331_-	PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated	NA|260aa|down_8|NZ_CP012831.1_1110330_1111110_-	COG2057, AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit [Lipid metabolism]	NA|287aa|down_9|NZ_CP012831.1_1111106_1111967_-	COG1788, AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism]
GCF_001307275.1_ASM130727v1	NZ_CP012831	Pseudomonas fluorescens strain FW300-N2C3 chromosome, complete genome	3	1300444-1300545	3	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,WYL	Orphan	CTCCCACAGGGGAAACGCGGTCCCACCAAGAA	32	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,WYL	NA|171aa|up_5|NZ_CP012831.1_1296386_1296899_-,NA|215aa|up_3|NZ_CP012831.1_1297336_1297981_-,NA|114aa|up_0|NZ_CP012831.1_1299921_1300263_+,NA	NA|212aa|up_9|NZ_CP012831.1_1293803_1294439_-	COG4385, gpI, Bacteriophage P2-related tail formation protein [General function prediction only]	NA|332aa|up_8|NZ_CP012831.1_1294435_1295431_-	PHA02568, J, baseplate assembly protein; Provisional	NA|111aa|up_7|NZ_CP012831.1_1295427_1295760_-	COG3628, COG3628, Phage baseplate assembly protein W [General function prediction only]	NA|204aa|up_6|NZ_CP012831.1_1295771_1296383_-	pfam04717, Phage_base_V, Type VI secretion system, phage-baseplate injector	NA|171aa|up_5|NZ_CP012831.1_1296386_1296899_-	NA	NA|117aa|up_4|NZ_CP012831.1_1296935_1297286_-	pfam16085, Phage_holin_3_5, Bacteriophage holin Hol, superfamily III	NA|215aa|up_3|NZ_CP012831.1_1297336_1297981_-	NA	NA|61aa|up_2|NZ_CP012831.1_1298001_1298184_-	pfam10122, Mu-like_Com, Mu-like prophage protein Com	NA|245aa|up_1|NZ_CP012831.1_1298650_1299385_-	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|114aa|up_0|NZ_CP012831.1_1299921_1300263_+	NA	NA|860aa|down_0|NZ_CP012831.1_1300965_1303545_+	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|108aa|down_1|NZ_CP012831.1_1303687_1304011_+	pfam11953, DUF3470, Domain of unknown function (DUF3470)	NA|336aa|down_2|NZ_CP012831.1_1304501_1305509_-	PRK05657, PRK05657, RNA polymerase sigma factor RpoS; Validated	NA|282aa|down_3|NZ_CP012831.1_1305615_1306461_-	PRK10871, nlpD, murein hydrolase activator NlpD	NA|226aa|down_4|NZ_CP012831.1_1306672_1307350_-	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA|250aa|down_5|NZ_CP012831.1_1307349_1308099_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|353aa|down_6|NZ_CP012831.1_1308086_1309145_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|158aa|down_7|NZ_CP012831.1_1309141_1309615_-	pfam02542, YgbB, YgbB family	NA|282aa|down_8|NZ_CP012831.1_1309658_1310504_-	PLN02442, PLN02442, S-formylglutathione hydrolase	NA|371aa|down_9|NZ_CP012831.1_1310512_1311625_-	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases
GCF_001307275.1_ASM130727v1	NZ_CP012831	Pseudomonas fluorescens strain FW300-N2C3 chromosome, complete genome	4	3420597-3420753	1	PILER-CR	no		cas3,DEDDh,csa3,DinG,WYL	Orphan	CCTACCGCTACGACGCCTTCGGCAAACGCATC	32	2	2	3420629-3420659|3420692-3420740	NZ_CP012831.1_4337060-4337090|NZ_CP012831.1_4337105-4337153	NA	2	2	Orphan	cas3,DEDDh,csa3,DinG,WYL	NA|152aa|up_3|NZ_CP012831.1_3412314_3412770_-,NA|134aa|down_0|NZ_CP012831.1_3421719_3422121_+,NA|335aa|down_8|NZ_CP012831.1_3432196_3433201_+	NA|221aa|up_9|NZ_CP012831.1_3407532_3408195_+	pfam10679, DUF2491, Protein of unknown function (DUF2491)	NA|143aa|up_8|NZ_CP012831.1_3408210_3408639_+	COG3766, COG3766, Predicted membrane protein [Function unknown]	NA|235aa|up_7|NZ_CP012831.1_3408658_3409363_+	pfam06693, DUF1190, Protein of unknown function (DUF1190)	NA|386aa|up_6|NZ_CP012831.1_3409375_3410533_+	pfam03738, GSP_synth, Glutathionylspermidine synthase preATP-grasp	NA|311aa|up_5|NZ_CP012831.1_3410670_3411603_-	COG4589, COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]	NA|207aa|up_4|NZ_CP012831.1_3411604_3412225_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|152aa|up_3|NZ_CP012831.1_3412314_3412770_-	NA	NA|448aa|up_2|NZ_CP012831.1_3412759_3414103_-	cd14527, DSP_bac, unknown subfamily of bacterial and plant dual specificity protein phosphatases	NA|586aa|up_1|NZ_CP012831.1_3414102_3415860_-	pfam12147, Methyltransf_20, Putative methyltransferase	NA|208aa|up_0|NZ_CP012831.1_3415871_3416495_-	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|134aa|down_0|NZ_CP012831.1_3421719_3422121_+	NA	NA|418aa|down_1|NZ_CP012831.1_3422462_3423716_+	PRK08249, PRK08249, cystathionine gamma-synthase family protein	NA|477aa|down_2|NZ_CP012831.1_3423850_3425281_+	PRK11387, PRK11387, S-methylmethionine permease	NA|295aa|down_3|NZ_CP012831.1_3425340_3426225_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|455aa|down_4|NZ_CP012831.1_3426255_3427620_+	PRK09225, PRK09225, threonine synthase; Validated	NA|146aa|down_5|NZ_CP012831.1_3427631_3428069_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|353aa|down_6|NZ_CP012831.1_3429503_3430562_+	PRK06270, PRK06270, homoserine dehydrogenase; Provisional	NA|471aa|down_7|NZ_CP012831.1_3430558_3431971_+	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1	NA|335aa|down_8|NZ_CP012831.1_3432196_3433201_+	NA	NA|425aa|down_9|NZ_CP012831.1_3433760_3435035_+	pfam02435, Glyco_hydro_68, Levansucrase/Invertase
