assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001308065.1_ASM130806v1	NZ_CP012868	Escherichia coli str. K-12 substr. MG1655 strain K-12 chromosome, complete genome	1	1410190-1410330	1	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	Orphan	CACGCCGCATCCGCCAGTGGCGCGGTGCAGATGCCGGATGC	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	NA,NA|357aa|down_1|NZ_CP012868.1_1412784_1413855_-	NA|184aa|up_9|NZ_CP012868.1_1399911_1400463_+	pfam10688, Imp-YgjV, Bacterial inner membrane protein	NA|415aa|up_8|NZ_CP012868.1_1400467_1401712_-	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional	NA|322aa|up_7|NZ_CP012868.1_1402110_1403076_-	TIGR03718, R_switched_Alx, integral membrane protein, TerC family	NA|329aa|up_6|NZ_CP012868.1_1403358_1404345_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|231aa|up_5|NZ_CP012868.1_1404423_1405116_-	COG2949, SanA, Uncharacterized membrane protein [Function unknown]	NA|168aa|up_4|NZ_CP012868.1_1405192_1405696_-	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only]	NA|379aa|up_3|NZ_CP012868.1_1405780_1406917_+	PRK15001, PRK15001, 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG	NA|105aa|up_2|NZ_CP012868.1_1407200_1407515_+	COG4680, COG4680, Uncharacterized protein conserved in bacteria [Function unknown]	NA|139aa|up_1|NZ_CP012868.1_1407511_1407928_+	COG5499, COG5499, Predicted transcription regulator containing HTH domain [Transcription]	NA|673aa|up_0|NZ_CP012868.1_1407972_1409991_-	cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain	NA|784aa|down_0|NZ_CP012868.1_1410416_1412768_-	PRK10137, PRK10137, alpha-glucosidase; Provisional	NA|357aa|down_1|NZ_CP012868.1_1412784_1413855_-	NA	NA|478aa|down_2|NZ_CP012868.1_1413988_1415422_-	PRK15238, PRK15238, inner membrane transporter YjeM; Provisional	NA|150aa|down_3|NZ_CP012868.1_1415484_1415934_-	PRK10202, ebgC, beta-galactosidase subunit beta	NA|1031aa|down_4|NZ_CP012868.1_1415930_1419023_-	PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed	NA|328aa|down_5|NZ_CP012868.1_1419206_1420190_-	PRK10339, PRK10339, DNA-binding transcriptional repressor EbgR; Provisional	NA|111aa|down_6|NZ_CP012868.1_1420408_1420741_+	PRK10089, PRK10089, chaperone CsaA	NA|497aa|down_7|NZ_CP012868.1_1420782_1422273_-	PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase; Provisional	NA|507aa|down_8|NZ_CP012868.1_1422579_1424100_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|208aa|down_9|NZ_CP012868.1_1424253_1424877_-	COG1695, COG1695, Predicted transcriptional regulators [Transcription]
GCF_001308065.1_ASM130806v1	NZ_CP012868	Escherichia coli str. K-12 substr. MG1655 strain K-12 chromosome, complete genome	2	1737249-1737642	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	6,6,6	6	Unclear	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	NA|47aa|up_1|NZ_CP012868.1_1735958_1736099_-,NA	NA|434aa|up_9|NZ_CP012868.1_1726655_1727957_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP012868.1_1728004_1730239_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP012868.1_1730316_1730565_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP012868.1_1730564_1730900_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP012868.1_1730970_1731762_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP012868.1_1731989_1733627_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP012868.1_1733714_1735013_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP012868.1_1735072_1735945_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP012868.1_1735958_1736099_-	NA	NA|224aa|up_0|NZ_CP012868.1_1736237_1736909_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP012868.1_1738281_1739760_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP012868.1_1739786_1741064_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP012868.1_1741382_1742168_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP012868.1_1742237_1743692_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP012868.1_1743713_1745123_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP012868.1_1745100_1745880_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|298aa|down_6|NZ_CP012868.1_1745843_1746737_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP012868.1_1746884_1747460_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP012868.1_1747476_1747737_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP012868.1_1747727_1748999_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_001308065.1_ASM130806v1	NZ_CP012868	Escherichia coli str. K-12 substr. MG1655 strain K-12 chromosome, complete genome	3	1763193-1763955	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	Type I-E	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	8,12,12	12	TypeI-E	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	NA,NA	NA|571aa|up_9|NZ_CP012868.1_1751556_1753269_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP012868.1_1753343_1754078_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|889aa|up_7|NZ_CP012868.1_1754436_1757103_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|503aa|up_6|NZ_CP012868.1_1757517_1759026_+	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cse2gr11|161aa|up_5|NZ_CP012868.1_1759018_1759501_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|364aa|up_4|NZ_CP012868.1_1759513_1760605_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|225aa|up_3|NZ_CP012868.1_1760607_1761282_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|200aa|up_2|NZ_CP012868.1_1761268_1761868_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|306aa|up_1|NZ_CP012868.1_1761883_1762801_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|NZ_CP012868.1_1762802_1763087_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP012868.1_1764037_1765075_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP012868.1_1765326_1766235_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP012868.1_1766236_1767664_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP012868.1_1767663_1768269_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP012868.1_1768318_1768642_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP012868.1_1768835_1769147_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP012868.1_1769165_1769876_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP012868.1_1769875_1770355_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP012868.1_1770351_1771401_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP012868.1_1771381_1772143_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_001308065.1_ASM130806v1	NZ_CP012868	Escherichia coli str. K-12 substr. MG1655 strain K-12 chromosome, complete genome	4	2294369-2294486	4	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	NA,NA	NA|62aa|up_9|NZ_CP012868.1_2283654_2283840_-	PRK09956, PRK09956, ISNCY family transposase	NA|300aa|up_8|NZ_CP012868.1_2283852_2284752_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_7|NZ_CP012868.1_2284944_2286135_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_6|NZ_CP012868.1_2286131_2287391_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_5|NZ_CP012868.1_2287380_2289009_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_4|NZ_CP012868.1_2289281_2290640_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_3|NZ_CP012868.1_2290644_2291721_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|217aa|up_2|NZ_CP012868.1_2292183_2292834_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP012868.1_2292887_2293142_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP012868.1_2293141_2294272_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP012868.1_2294505_2296791_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP012868.1_2297486_2301239_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP012868.1_2301366_2302089_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP012868.1_2302235_2304863_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP012868.1_2305011_2306700_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP012868.1_2306696_2307320_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|550aa|down_6|NZ_CP012868.1_2311858_2313508_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_7|NZ_CP012868.1_2313512_2314289_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_8|NZ_CP012868.1_2314362_2315547_-	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|441aa|down_9|NZ_CP012868.1_2315577_2316900_-	pfam02667, SCFA_trans, Short chain fatty acid transporter
GCF_001308065.1_ASM130806v1	NZ_CP012868	Escherichia coli str. K-12 substr. MG1655 strain K-12 chromosome, complete genome	5	2895100-2895223	5	CRISPRCasFinder	no	DEDDh	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	NA,NA|30aa|down_7|NZ_CP012868.1_2904119_2904209_+	NA|471aa|up_9|NZ_CP012868.1_2884554_2885967_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP012868.1_2886523_2886733_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP012868.1_2887187_2887814_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP012868.1_2887834_2889937_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP012868.1_2889949_2890588_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP012868.1_2890651_2891320_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP012868.1_2891316_2892102_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP012868.1_2892105_2892918_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP012868.1_2892929_2894534_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP012868.1_2894659_2894965_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP012868.1_2895537_2896794_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP012868.1_2896834_2898208_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP012868.1_2898422_2899064_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP012868.1_2899103_2900252_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP012868.1_2900542_2901754_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP012868.1_2901866_2902799_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP012868.1_2902795_2903821_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP012868.1_2904119_2904209_+	NA	NA|390aa|down_8|NZ_CP012868.1_2904374_2905544_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP012868.1_2905705_2906287_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_001308065.1_ASM130806v1	NZ_CP012868	Escherichia coli str. K-12 substr. MG1655 strain K-12 chromosome, complete genome	6	3573442-3573533	6	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	NA|70aa|up_9|NZ_CP012868.1_3562518_3562728_-,NA	NA|70aa|up_9|NZ_CP012868.1_3562518_3562728_-	NA	NA|1321aa|up_8|NZ_CP012868.1_3562782_3566745_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP012868.1_3566784_3567423_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP012868.1_3567710_3568802_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP012868.1_3568801_3569494_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP012868.1_3569505_3569892_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP012868.1_3569899_3570700_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP012868.1_3570709_3571300_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP012868.1_3571310_3571805_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP012868.1_3571825_3573154_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP012868.1_3573956_3574553_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP012868.1_3574573_3574801_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP012868.1_3574838_3576080_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP012868.1_3576372_3577629_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP012868.1_3577889_3578810_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP012868.1_3578809_3579115_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP012868.1_3579266_3579866_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP012868.1_3579862_3582409_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP012868.1_3582408_3583581_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP012868.1_3583710_3584403_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_001308065.1_ASM130806v1	NZ_CP012868	Escherichia coli str. K-12 substr. MG1655 strain K-12 chromosome, complete genome	7	3835733-3835877	7	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	NA,NA	NA|330aa|up_9|NZ_CP012868.1_3823631_3824621_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP012868.1_3825017_3825926_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP012868.1_3826117_3828139_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP012868.1_3828717_3829395_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP012868.1_3829387_3830143_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP012868.1_3830129_3831284_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP012868.1_3831280_3832321_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP012868.1_3832407_3833697_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP012868.1_3833755_3834232_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP012868.1_3834383_3835667_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP012868.1_3835900_3838162_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP012868.1_3838344_3839778_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP012868.1_3839853_3840906_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP012868.1_3841089_3842043_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP012868.1_3842083_3843079_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP012868.1_3843233_3844052_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP012868.1_3844052_3845111_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP012868.1_3845113_3845803_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP012868.1_3845802_3846576_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP012868.1_3846742_3846892_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_001308065.1_ASM130806v1	NZ_CP012868	Escherichia coli str. K-12 substr. MG1655 strain K-12 chromosome, complete genome	8	4090203-4090299	8	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	NA,NA	NA|231aa|up_9|NZ_CP012868.1_4081998_4082691_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP012868.1_4082910_4083453_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP012868.1_4083923_4084790_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP012868.1_4084791_4085004_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP012868.1_4085111_4085633_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP012868.1_4085668_4087054_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP012868.1_4087227_4087722_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP012868.1_4087724_4088447_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP012868.1_4088564_4089074_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP012868.1_4089070_4090138_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP012868.1_4090332_4091226_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP012868.1_4091222_4092038_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP012868.1_4092048_4093308_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP012868.1_4093317_4094985_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NZ_CP012868.1_4095301_4096351_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NZ_CP012868.1_4096372_4097608_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|NZ_CP012868.1_4097618_4098404_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_7|NZ_CP012868.1_4098631_4099777_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|NZ_CP012868.1_4099798_4101100_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|NZ_CP012868.1_4101156_4102518_-	PRK08044, PRK08044, allantoinase AllB
GCF_001308065.1_ASM130806v1	NZ_CP012868	Escherichia coli str. K-12 substr. MG1655 strain K-12 chromosome, complete genome	9	4230445-4230589	9	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	Orphan	TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,c2c9_V-U4	NA,NA|28aa|down_2|NZ_CP012868.1_4232634_4232718_-	NA|357aa|up_9|NZ_CP012868.1_4215583_4216654_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|194aa|up_8|NZ_CP012868.1_4216746_4217328_+	PRK10045, PRK10045, ACP phosphodiesterase	NA|606aa|up_7|NZ_CP012868.1_4217332_4219150_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|458aa|up_6|NZ_CP012868.1_4219305_4220679_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|up_5|NZ_CP012868.1_4220754_4222074_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|432aa|up_4|NZ_CP012868.1_4222480_4223776_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_3|NZ_CP012868.1_4223833_4224523_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|401aa|up_2|NZ_CP012868.1_4224712_4225915_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1049aa|up_1|NZ_CP012868.1_4225911_4229058_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|395aa|up_0|NZ_CP012868.1_4229183_4230368_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|303aa|down_0|NZ_CP012868.1_4230612_4231521_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|304aa|down_1|NZ_CP012868.1_4231645_4232557_+	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|28aa|down_2|NZ_CP012868.1_4232634_4232718_-	NA	NA|95aa|down_3|NZ_CP012868.1_4233203_4233488_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|226aa|down_4|NZ_CP012868.1_4233559_4234237_-	PRK10481, PRK10481, hypothetical protein; Provisional	NA|64aa|down_5|NZ_CP012868.1_4234494_4234686_-	PRK10380, PRK10380, hypothetical protein; Provisional	NA|175aa|down_6|NZ_CP012868.1_4234735_4235260_-	PRK03731, aroL, shikimate kinase AroL	NA|153aa|down_7|NZ_CP012868.1_4235442_4235901_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|270aa|down_8|NZ_CP012868.1_4236020_4236830_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|372aa|down_9|NZ_CP012868.1_4236846_4237962_-	PRK10245, adrA, diguanylate cyclase AdrA; Provisional
