The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015918	Pediococcus pentosaceus strain wikim20 chromosome, complete genome	1739283	381722	392570	1739283		Bacillus_phage(28.57%)	12	NA	NA
WP_023440818.1|381722_382574_+	ParB/RepB/Spo0J family partition protein	NA	S5VTK0	Leptospira_phage	34.9	2.1e-12
WP_002834122.1|382587_382773_+	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_055126486.1|382990_384097_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_002834119.1|384125_384830_+	DUF1129 domain-containing protein	NA	NA	NA	NA	NA
WP_011673831.1|384851_385994_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	34.0	2.4e-64
WP_055126485.1|386124_386622_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	G5CRV0	Megavirus	36.4	6.4e-14
WP_002834114.1|386704_387394_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	37.3	5.7e-37
WP_011673829.1|387405_388542_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	25.8	2.8e-25
WP_055126484.1|388722_389979_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	23.8	1.7e-07
WP_002834111.1|390111_390900_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_002834110.1|390920_391253_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_011673827.1|391394_392570_-	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	33.3	4.8e-44
>prophage 2
NZ_CP015918	Pediococcus pentosaceus strain wikim20 chromosome, complete genome	1739283	612221	621089	1739283		Streptococcus_phage(33.33%)	10	NA	NA
WP_055126392.1|612221_614387_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	60.1	3.0e-249
WP_011673696.1|614488_614719_-	glutaredoxin-like protein NrdH	NA	A0A0M7REK7	Lactobacillus_phage	48.1	8.0e-12
WP_011673695.1|614930_615536_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011673694.1|615528_616014_+	nucleoside deaminase	NA	A0A2H4PQS8	Staphylococcus_phage	31.6	1.8e-05
WP_011673693.1|616226_617972_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	48.4	2.8e-56
WP_002833269.1|617987_618302_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_002833270.1|618328_618928_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_002833271.1|619092_619722_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	52.7	2.0e-52
WP_002833272.1|619737_620073_+	cyclic-di-AMP receptor	NA	NA	NA	NA	NA
WP_011673692.1|620072_621089_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	30.6	2.5e-33
>prophage 3
NZ_CP015918	Pediococcus pentosaceus strain wikim20 chromosome, complete genome	1739283	999836	1009454	1739283	tRNA	Staphylococcus_phage(37.5%)	9	NA	NA
WP_002833201.1|999836_1000307_+	nucleoside 2-deoxyribosyltransferase	NA	A0A1G5S9Z4	Enterococcus_phage	40.1	3.8e-16
WP_002833200.1|1000361_1001246_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	38.1	2.1e-52
WP_041526969.1|1001499_1002708_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	G3MAR3	Bacillus_virus	40.0	3.5e-34
WP_011673475.1|1002710_1004588_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.5	2.9e-51
WP_011673474.1|1004600_1005551_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	62.7	3.4e-117
WP_099046115.1|1005588_1006065_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	38.8	3.8e-24
WP_011673472.1|1006186_1007638_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_002833194.1|1007634_1008372_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.9	2.4e-33
WP_029258025.1|1008608_1009454_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	35.2	1.4e-16
>prophage 4
NZ_CP015918	Pediococcus pentosaceus strain wikim20 chromosome, complete genome	1739283	1133968	1140321	1739283		Lactobacillus_phage(16.67%)	8	NA	NA
WP_002833631.1|1133968_1134490_-	DUF4373 domain-containing protein	NA	A0A0P0HRQ2	Lactobacillus_phage	57.1	4.0e-43
WP_055126228.1|1134613_1135351_-	3-oxoacyl-ACP reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.5	3.1e-17
WP_011673330.1|1135351_1135573_-	DUF2829 domain-containing protein	NA	G3MBC9	Bacillus_virus	33.3	2.0e-07
WP_011673329.1|1135589_1136072_-	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	35.0	4.9e-11
WP_011673327.1|1136308_1136779_+	tryptophan-rich sensory protein	NA	NA	NA	NA	NA
WP_002833626.1|1136907_1137135_+	DUF378 domain-containing protein	NA	NA	NA	NA	NA
WP_002833625.1|1137240_1138365_-	molecular chaperone DnaJ	NA	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	33.2	1.3e-22
WP_011673326.1|1138461_1140321_-	molecular chaperone DnaK	NA	A0A2P1EIW2	Megavirus	47.2	5.3e-138
>prophage 5
NZ_CP015918	Pediococcus pentosaceus strain wikim20 chromosome, complete genome	1739283	1391709	1399123	1739283	integrase	Lysinibacillus_phage(16.67%)	9	1390706:1390723	1407347:1407364
1390706:1390723	attL	CTTGATATATCAACGTTT	NA	NA	NA	NA
WP_055126107.1|1391709_1392585_-	ATP-binding protein	NA	A0A2D1GQF9	Lysinibacillus_phage	25.1	5.6e-13
WP_055126106.1|1392587_1393532_-	DUF4373 domain-containing protein	NA	A8ATL0	Listeria_phage	27.2	7.6e-16
WP_055126105.1|1393544_1394012_-	hypothetical protein	NA	NA	NA	NA	NA
WP_055126104.1|1394228_1394834_-	antirepressor	NA	A0A1W6JPC3	Staphylococcus_phage	44.3	2.6e-41
WP_055126103.1|1394897_1395164_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_055126102.1|1395179_1395407_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_064635649.1|1395576_1396224_+	helix-turn-helix transcriptional regulator	NA	Q8LTN5	Lactococcus_phage	50.7	6.6e-11
WP_055126101.1|1396489_1397638_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	36.7	9.4e-61
WP_055126100.1|1397968_1399123_-|integrase	site-specific integrase	integrase	P97010	Streptococcus_pyogenes_phage	37.2	1.0e-59
1407347:1407364	attR	AAACGTTGATATATCAAG	NA	NA	NA	NA
>prophage 6
NZ_CP015918	Pediococcus pentosaceus strain wikim20 chromosome, complete genome	1739283	1520184	1527802	1739283		Bacillus_phage(33.33%)	8	NA	NA
WP_023440049.1|1520184_1520943_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.5	1.7e-18
WP_171030525.1|1520956_1521754_-	phosphate ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	42.0	3.4e-09
WP_002834456.1|1521774_1522662_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_055126025.1|1522662_1523571_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_055126024.1|1523570_1524452_-	phosphate ABC transporter substrate-binding protein PstS family protein	NA	H6WG65	Cyanophage	25.9	9.3e-08
WP_002834459.1|1524613_1525999_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	33.3	6.3e-27
WP_002834460.1|1525970_1526675_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	37.3	6.9e-38
WP_132981263.1|1526685_1527802_-	peptide chain release factor 2	NA	B5LLF2	Mycobacterium_phage	47.1	1.9e-05
