assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001447335.1_ASM144733v1	NZ_CP013067	Aeromonas schubertii strain WL1483 chromosome, complete genome	1	95824-96038	1	CRISPRCasFinder	no		csa3,cas3,DinG,RT,DEDDh,WYL	Orphan	GCTACGCCCTTGTCAAAAAGGTGGGTGTCCCAGAATCT	38	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,DinG,RT,DEDDh,WYL	NA|88aa|up_6|NZ_CP013067.1_88645_88909_-,NA|126aa|up_2|NZ_CP013067.1_92381_92759_-,NA|316aa|up_0|NZ_CP013067.1_94630_95578_-,NA|95aa|down_0|NZ_CP013067.1_97212_97497_+	NA|335aa|up_9|NZ_CP013067.1_85377_86382_+	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|176aa|up_8|NZ_CP013067.1_86438_86966_-	TIGR00636, PduO_Nterm, ATP:cob(I)alamin adenosyltransferase	NA|301aa|up_7|NZ_CP013067.1_87030_87933_-	pfam18433, DUF5610, Domain of unknown function (DUF5610)	NA|88aa|up_6|NZ_CP013067.1_88645_88909_-	NA	NA|365aa|up_5|NZ_CP013067.1_89064_90159_+	PRK05031, PRK05031, tRNA (uracil-5-)-methyltransferase; Validated	NA|403aa|up_4|NZ_CP013067.1_90388_91597_+	COG0348, NapH, Polyferredoxin [Energy production and conversion]	NA|230aa|up_3|NZ_CP013067.1_91603_92293_-	PRK15245, PRK15245, type III secretion system effector phosphothreonine lyase	NA|126aa|up_2|NZ_CP013067.1_92381_92759_-	NA	NA|405aa|up_1|NZ_CP013067.1_92934_94149_+	TIGR00837, Tyrosine-specific_transport_protein, aromatic amino acid transport protein	NA|316aa|up_0|NZ_CP013067.1_94630_95578_-	NA	NA|95aa|down_0|NZ_CP013067.1_97212_97497_+	NA	NA|347aa|down_1|NZ_CP013067.1_97578_98619_-	pfam00665, rve, Integrase core domain	NA|690aa|down_2|NZ_CP013067.1_98791_100861_-	PRK01233, glyS, glycyl-tRNA synthetase subunit beta; Validated	NA|308aa|down_3|NZ_CP013067.1_100870_101794_-	PRK09348, glyQ, glycyl-tRNA synthetase subunit alpha; Validated	NA|203aa|down_4|NZ_CP013067.1_101887_102496_+	pfam03352, Adenine_glyco, Methyladenine glycosylase	NA|324aa|down_5|NZ_CP013067.1_104416_105388_+	cd13568, PBP2_TAXI_TRAP_like_3, Substrate binding domain of putative TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold	NA|853aa|down_6|NZ_CP013067.1_105470_108029_+	TIGR02123, conserved_inner_membrane_protein, TRAP transporter, 4TM/12TM fusion protein	NA|419aa|down_7|NZ_CP013067.1_108375_109632_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|108aa|down_8|NZ_CP013067.1_109690_110014_-	PRK05264, PRK05264, met regulon transcriptional regulator MetJ	NA|388aa|down_9|NZ_CP013067.1_110173_111337_+	TIGR02080, Cystathionine_gamma-synthase, O-succinylhomoserine (thiol)-lyase
GCF_001447335.1_ASM144733v1	NZ_CP013067	Aeromonas schubertii strain WL1483 chromosome, complete genome	2	817073-817180	2	CRISPRCasFinder	no		csa3,cas3,DinG,RT,DEDDh,WYL	Orphan	GCTCGGTCGAGCTCCTTGCCTACG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DinG,RT,DEDDh,WYL	NA|141aa|up_9|NZ_CP013067.1_806976_807399_+,NA|76aa|down_0|NZ_CP013067.1_819963_820191_-,NA|106aa|down_2|NZ_CP013067.1_821230_821548_+,NA|71aa|down_3|NZ_CP013067.1_821627_821840_+,NA|127aa|down_4|NZ_CP013067.1_821886_822267_-	NA|141aa|up_9|NZ_CP013067.1_806976_807399_+	NA	NA|356aa|up_8|NZ_CP013067.1_807438_808506_-	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|161aa|up_7|NZ_CP013067.1_809532_810015_+	pfam04353, Rsd_AlgQ, Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ	NA|127aa|up_6|NZ_CP013067.1_810104_810485_+	pfam07238, PilZ, PilZ domain	NA|308aa|up_5|NZ_CP013067.1_810576_811500_+	cd08412, PBP2_PAO1_like, The C-terminal substrate-binding domain of putative LysR-type transcriptional regulator PAO1-like, a member of the type 2 periplasmic binding fold protein superfamily	NA|376aa|up_4|NZ_CP013067.1_811697_812825_+	cd13588, PBP2_polyamine_1, The periplasmic-binding component of an uncharacterized ABC transporter involved in uptake of polyamines; contains the type 2 periplasmic binding fold	NA|333aa|up_3|NZ_CP013067.1_812870_813869_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|318aa|up_2|NZ_CP013067.1_813865_814819_+	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism]	NA|266aa|up_1|NZ_CP013067.1_814808_815606_+	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]	NA|477aa|up_0|NZ_CP013067.1_815625_817056_+	PRK13473, PRK13473, aminobutyraldehyde dehydrogenase	NA|76aa|down_0|NZ_CP013067.1_819963_820191_-	NA	NA|277aa|down_1|NZ_CP013067.1_820196_821027_-	pfam02517, Abi, CAAX protease self-immunity	NA|106aa|down_2|NZ_CP013067.1_821230_821548_+	NA	NA|71aa|down_3|NZ_CP013067.1_821627_821840_+	NA	NA|127aa|down_4|NZ_CP013067.1_821886_822267_-	NA	NA|241aa|down_5|NZ_CP013067.1_822390_823113_-	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]	NA|276aa|down_6|NZ_CP013067.1_823235_824063_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|167aa|down_7|NZ_CP013067.1_824107_824608_-	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|85aa|down_8|NZ_CP013067.1_824651_824906_-	PRK13687, PRK13687, hypothetical protein; Provisional	NA|173aa|down_9|NZ_CP013067.1_825107_825626_-	cd03011, TlpA_like_ScsD_MtbDsbE, TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif
GCF_001447335.1_ASM144733v1	NZ_CP013067	Aeromonas schubertii strain WL1483 chromosome, complete genome	3	3090042-3090122	3	CRISPRCasFinder	no		csa3,cas3,DinG,RT,DEDDh,WYL	Orphan	GACGCCCAATAACCCCAAACAAC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DinG,RT,DEDDh,WYL	NA|326aa|up_0|NZ_CP013067.1_3088901_3089879_-,NA	NA|302aa|up_9|NZ_CP013067.1_3078612_3079518_-	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator	NA|215aa|up_8|NZ_CP013067.1_3079615_3080260_+	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|166aa|up_7|NZ_CP013067.1_3080256_3080754_+	cd04332, YbaK_like, YbaK-like	NA|393aa|up_6|NZ_CP013067.1_3080876_3082055_+	pfam00375, SDF, Sodium:dicarboxylate symporter family	NA|324aa|up_5|NZ_CP013067.1_3082242_3083214_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|258aa|up_4|NZ_CP013067.1_3083451_3084225_+	cd05233, SDR_c, classical (c) SDRs	NA|226aa|up_3|NZ_CP013067.1_3084735_3085413_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|402aa|up_2|NZ_CP013067.1_3086050_3087255_+	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed	NA|234aa|up_1|NZ_CP013067.1_3087634_3088336_-	PRK13374, PRK13374, DeoD-type purine-nucleoside phosphorylase	NA|326aa|up_0|NZ_CP013067.1_3088901_3089879_-	NA	NA|306aa|down_0|NZ_CP013067.1_3090230_3091148_-	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|425aa|down_1|NZ_CP013067.1_3091566_3092841_-	PRK09225, PRK09225, threonine synthase; Validated	NA|325aa|down_2|NZ_CP013067.1_3092837_3093812_-	PRK01212, PRK01212, homoserine kinase; Provisional	NA|820aa|down_3|NZ_CP013067.1_3093814_3096274_-	PRK09436, thrA, bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional	NA|230aa|down_4|NZ_CP013067.1_3096501_3097191_-	PRK10433, PRK10433, putative RNA methyltransferase; Provisional	NA|576aa|down_5|NZ_CP013067.1_3097310_3099038_+	pfam06315, AceK, Isocitrate dehydrogenase kinase/phosphatase (AceK)	NA|956aa|down_6|NZ_CP013067.1_3099106_3101974_+	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|134aa|down_7|NZ_CP013067.1_3102016_3102418_-	pfam03724, META, META domain	NA|150aa|down_8|NZ_CP013067.1_3102669_3103119_+	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase	NA|152aa|down_9|NZ_CP013067.1_3103156_3103612_+	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein
GCF_001447335.1_ASM144733v1	NZ_CP013067	Aeromonas schubertii strain WL1483 chromosome, complete genome	4	3142995-3143105	4	CRISPRCasFinder	no		csa3,cas3,DinG,RT,DEDDh,WYL	Orphan	GCTCGGCCAAGCTCCTTGCCTATGGCCAGCC	31	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DinG,RT,DEDDh,WYL	NA|113aa|up_9|NZ_CP013067.1_3134053_3134392_-,NA|292aa|up_8|NZ_CP013067.1_3134554_3135430_+,NA|91aa|up_7|NZ_CP013067.1_3136185_3136458_+,NA|97aa|up_1|NZ_CP013067.1_3140760_3141051_+,NA|146aa|down_0|NZ_CP013067.1_3144042_3144480_+,NA|237aa|down_1|NZ_CP013067.1_3144638_3145349_+,NA|168aa|down_5|NZ_CP013067.1_3149926_3150430_+	NA|113aa|up_9|NZ_CP013067.1_3134053_3134392_-	NA	NA|292aa|up_8|NZ_CP013067.1_3134554_3135430_+	NA	NA|91aa|up_7|NZ_CP013067.1_3136185_3136458_+	NA	NA|198aa|up_6|NZ_CP013067.1_3136515_3137109_+	pfam10986, DUF2796, Protein of unknown function (DUF2796)	NA|230aa|up_5|NZ_CP013067.1_3137112_3137802_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|416aa|up_4|NZ_CP013067.1_3137795_3139043_+	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|158aa|up_3|NZ_CP013067.1_3139062_3139536_+	pfam11736, DUF3299, Protein of unknown function (DUF3299)	NA|285aa|up_2|NZ_CP013067.1_3139629_3140484_+	TIGR03899, hypothetical_protein, TIGR03899 family protein	NA|97aa|up_1|NZ_CP013067.1_3140760_3141051_+	NA	NA|333aa|up_0|NZ_CP013067.1_3141800_3142799_+	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	NA|146aa|down_0|NZ_CP013067.1_3144042_3144480_+	NA	NA|237aa|down_1|NZ_CP013067.1_3144638_3145349_+	NA	NA|220aa|down_2|NZ_CP013067.1_3146269_3146929_+	pfam07693, KAP_NTPase, KAP family P-loop domain	NA|347aa|down_3|NZ_CP013067.1_3146954_3147995_-	pfam00665, rve, Integrase core domain	NA|252aa|down_4|NZ_CP013067.1_3149082_3149838_+	TIGR03789, pdsO, proteobacterial sortase system peptidoglycan-associated protein	NA|168aa|down_5|NZ_CP013067.1_3149926_3150430_+	NA	NA|198aa|down_6|NZ_CP013067.1_3151709_3152303_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|575aa|down_7|NZ_CP013067.1_3152348_3154073_-	COG0471, CitT, Di- and tricarboxylate transporters [Inorganic ion transport and metabolism]	NA|472aa|down_8|NZ_CP013067.1_3154076_3155492_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|down_9|NZ_CP013067.1_3155501_3156410_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD
GCF_001447335.1_ASM144733v1	NZ_CP013067	Aeromonas schubertii strain WL1483 chromosome, complete genome	5	3588005-3588109	5	CRISPRCasFinder	no		csa3,cas3,DinG,RT,DEDDh,WYL	Orphan	CTACGCCCCTGTCAAAATGGTGGGTGTCCCAG	32	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DinG,RT,DEDDh,WYL	NA|73aa|up_9|NZ_CP013067.1_3576700_3576919_+,NA|97aa|up_8|NZ_CP013067.1_3577900_3578191_-,NA|319aa|up_1|NZ_CP013067.1_3585551_3586508_+,NA|316aa|up_0|NZ_CP013067.1_3586819_3587767_-,NA|316aa|down_0|NZ_CP013067.1_3588726_3589674_-	NA|73aa|up_9|NZ_CP013067.1_3576700_3576919_+	NA	NA|97aa|up_8|NZ_CP013067.1_3577900_3578191_-	NA	NA|712aa|up_7|NZ_CP013067.1_3578351_3580487_+	pfam05170, AsmA, AsmA family	NA|214aa|up_6|NZ_CP013067.1_3580616_3581258_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|315aa|up_5|NZ_CP013067.1_3581254_3582199_+	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional	NA|310aa|up_4|NZ_CP013067.1_3582195_3583125_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|373aa|up_3|NZ_CP013067.1_3583114_3584233_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|411aa|up_2|NZ_CP013067.1_3584299_3585532_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|319aa|up_1|NZ_CP013067.1_3585551_3586508_+	NA	NA|316aa|up_0|NZ_CP013067.1_3586819_3587767_-	NA	NA|316aa|down_0|NZ_CP013067.1_3588726_3589674_-	NA	NA|107aa|down_1|NZ_CP013067.1_3589903_3590224_+	pfam00005, ABC_tran, ABC transporter	NA|347aa|down_2|NZ_CP013067.1_3592285_3593326_-	pfam00665, rve, Integrase core domain	NA|568aa|down_3|NZ_CP013067.1_3593520_3595224_-	PRK06565, PRK06565, amidase; Validated	NA|366aa|down_4|NZ_CP013067.1_3595504_3596602_-	PRK13551, PRK13551, agmatine deiminase; Provisional	NA|308aa|down_5|NZ_CP013067.1_3596799_3597723_+	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|188aa|down_6|NZ_CP013067.1_3597730_3598294_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|347aa|down_7|NZ_CP013067.1_3598485_3599526_+	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain	NA|314aa|down_8|NZ_CP013067.1_3599634_3600576_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|530aa|down_9|NZ_CP013067.1_3600667_3602257_-	PRK00741, prfC, peptide chain release factor 3; Provisional
