assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001449085.1_ASM144908v1	NZ_CP012680	Pseudomonas brassicacearum strain LBUM300 chromosome, complete genome	1	1517032-1517164	1	CRISPRCasFinder	no		PD-DExK,DEDDh,RT,DinG,csa3,cas3,WYL	Orphan	TGTGGGAGCAAAGCTTGCTCGCGAGGCGGCCTGACAGCCGGCCTG	45	1	4	1517077-1517119|1517077-1517119|1517077-1517119|1517077-1517119	NZ_CP012680.1_366652-366694|NZ_CP012680.1_1298973-1299015|NZ_CP012680.1_1301109-1301151|NZ_CP012680.1_6627895-6627937	NA	1	1	Orphan	PD-DExK,DEDDh,RT,DinG,csa3,cas3,WYL	NA,NA	NA|84aa|up_9|NZ_CP012680.1_1507923_1508175_+	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed	NA|179aa|up_8|NZ_CP012680.1_1508180_1508717_+	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|251aa|up_7|NZ_CP012680.1_1508719_1509472_+	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|117aa|up_6|NZ_CP012680.1_1509517_1509868_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|299aa|up_5|NZ_CP012680.1_1510000_1510897_+	PRK00283, xerD, tyrosine recombinase	NA|244aa|up_4|NZ_CP012680.1_1511182_1511914_+	PRK10877, PRK10877, protein disulfide isomerase II DsbC; Provisional	NA|435aa|up_3|NZ_CP012680.1_1512046_1513351_+	PRK06349, PRK06349, homoserine dehydrogenase; Provisional	NA|470aa|up_2|NZ_CP012680.1_1513456_1514866_+	PRK09225, PRK09225, threonine synthase; Validated	NA|457aa|up_1|NZ_CP012680.1_1514986_1516357_+	cd13707, PBP2_BvgS_D2, The second of the two tandem periplasmic domains of sensor-kinase BvgS; the type 2 peripasmic-binding fold protein	NA|96aa|up_0|NZ_CP012680.1_1516541_1516829_+	pfam12021, DUF3509, Protein of unknown function (DUF3509)	NA|400aa|down_0|NZ_CP012680.1_1517312_1518512_-	COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion]	NA|181aa|down_1|NZ_CP012680.1_1518659_1519202_+	pfam07152, YaeQ, YaeQ protein	NA|570aa|down_2|NZ_CP012680.1_1519291_1521001_+	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ	NA|369aa|down_3|NZ_CP012680.1_1521248_1522355_+	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain	NA|543aa|down_4|NZ_CP012680.1_1522557_1524186_-	PRK13273, mdoD, glucan biosynthesis protein D; Provisional	NA|62aa|down_5|NZ_CP012680.1_1524547_1524733_+	cd16439, beta_Kdo_transferase_KpsC_2, beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase KpsC, repeat 2	NA|100aa|down_6|NZ_CP012680.1_1524778_1525078_-	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|88aa|down_7|NZ_CP012680.1_1525040_1525304_-	COG3905, COG3905, Predicted transcriptional regulator [Transcription]	NA|475aa|down_8|NZ_CP012680.1_1525450_1526875_-	PRK13473, PRK13473, aminobutyraldehyde dehydrogenase	NA|273aa|down_9|NZ_CP012680.1_1527022_1527841_-	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]
GCF_001449085.1_ASM144908v1	NZ_CP012680	Pseudomonas brassicacearum strain LBUM300 chromosome, complete genome	2	1628738-1628832	2	CRISPRCasFinder	no		PD-DExK,DEDDh,RT,DinG,csa3,cas3,WYL	Orphan	ATTGTGGGAGCGAGCCTGCTCGCGA	25	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,RT,DinG,csa3,cas3,WYL	NA,NA|118aa|down_0|NZ_CP012680.1_1628944_1629298_-,NA|171aa|down_5|NZ_CP012680.1_1632272_1632785_+	NA|371aa|up_9|NZ_CP012680.1_1616600_1617713_+	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases	NA|282aa|up_8|NZ_CP012680.1_1617721_1618567_+	PLN02442, PLN02442, S-formylglutathione hydrolase	NA|158aa|up_7|NZ_CP012680.1_1618610_1619084_+	pfam02542, YgbB, YgbB family	NA|353aa|up_6|NZ_CP012680.1_1619080_1620139_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|250aa|up_5|NZ_CP012680.1_1620126_1620876_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|226aa|up_4|NZ_CP012680.1_1620875_1621553_+	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA|282aa|up_3|NZ_CP012680.1_1621764_1622610_+	PRK10871, nlpD, murein hydrolase activator NlpD	NA|336aa|up_2|NZ_CP012680.1_1622716_1623724_+	PRK05657, PRK05657, RNA polymerase sigma factor RpoS; Validated	NA|108aa|up_1|NZ_CP012680.1_1625157_1625481_-	pfam11953, DUF3470, Domain of unknown function (DUF3470)	NA|860aa|up_0|NZ_CP012680.1_1625623_1628203_-	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional	NA|118aa|down_0|NZ_CP012680.1_1628944_1629298_-	NA	NA|245aa|down_1|NZ_CP012680.1_1629846_1630581_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|53aa|down_2|NZ_CP012680.1_1631040_1631199_+	pfam10122, Mu-like_Com, Mu-like prophage protein Com	NA|194aa|down_3|NZ_CP012680.1_1631237_1631819_+	TIGR04362, hypothetical_protein, choice-of-anchor C domain	NA|117aa|down_4|NZ_CP012680.1_1631885_1632236_+	pfam16085, Phage_holin_3_5, Bacteriophage holin Hol, superfamily III	NA|171aa|down_5|NZ_CP012680.1_1632272_1632785_+	NA	NA|204aa|down_6|NZ_CP012680.1_1632788_1633400_+	pfam04717, Phage_base_V, Type VI secretion system, phage-baseplate injector	NA|111aa|down_7|NZ_CP012680.1_1633411_1633744_+	COG3628, COG3628, Phage baseplate assembly protein W [General function prediction only]	NA|332aa|down_8|NZ_CP012680.1_1633740_1634736_+	PHA02568, J, baseplate assembly protein; Provisional	NA|212aa|down_9|NZ_CP012680.1_1634732_1635368_+	COG4385, gpI, Bacteriophage P2-related tail formation protein [General function prediction only]
GCF_001449085.1_ASM144908v1	NZ_CP012680	Pseudomonas brassicacearum strain LBUM300 chromosome, complete genome	3	2297110-2297208	3	CRISPRCasFinder	no		PD-DExK,DEDDh,RT,DinG,csa3,cas3,WYL	Orphan	GCGAGGCGGCCTAACAGCCGGTCTGG	26	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,RT,DinG,csa3,cas3,WYL	NA|82aa|up_4|NZ_CP012680.1_2292121_2292367_+,NA	NA|273aa|up_9|NZ_CP012680.1_2285892_2286711_-	PRK05339, PRK05339, pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator	NA|792aa|up_8|NZ_CP012680.1_2286895_2289271_+	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated	NA|330aa|up_7|NZ_CP012680.1_2289429_2290419_+	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|164aa|up_6|NZ_CP012680.1_2290545_2291037_+	PRK09372, PRK09372, ribonuclease E inhibitor RraA	NA|332aa|up_5|NZ_CP012680.1_2291062_2292058_+	cd12833, ZntB-like_1, Salmonella typhimurium Zn2+ transporter ZntB-like subgroup	NA|82aa|up_4|NZ_CP012680.1_2292121_2292367_+	NA	NA|275aa|up_3|NZ_CP012680.1_2292369_2293194_+	pfam05552, TM_helix, Conserved TM helix	NA|197aa|up_2|NZ_CP012680.1_2293285_2293876_+	PRK09640, PRK09640, RNA polymerase sigma factor SigX; Reviewed	NA|345aa|up_1|NZ_CP012680.1_2293984_2295019_+	pfam05736, OprF, OprF membrane domain	NA|477aa|up_0|NZ_CP012680.1_2295420_2296851_+	COG3666, COG3666, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|252aa|down_0|NZ_CP012680.1_2297340_2298096_-	PRK06136, PRK06136, uroporphyrinogen-III C-methyltransferase	NA|906aa|down_1|NZ_CP012680.1_2298106_2300824_-	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite	NA|106aa|down_2|NZ_CP012680.1_2300823_2301141_-	cd03530, Rieske_NirD_small_Bacillus, Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain	NA|818aa|down_3|NZ_CP012680.1_2301137_2303591_-	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion]	NA|557aa|down_4|NZ_CP012680.1_2304126_2305797_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|404aa|down_5|NZ_CP012680.1_2305806_2307018_-	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism]	NA|192aa|down_6|NZ_CP012680.1_2307385_2307961_-	COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms]	NA|404aa|down_7|NZ_CP012680.1_2307975_2309187_-	pfam13379, NMT1_2, NMT1-like family	NA|340aa|down_8|NZ_CP012680.1_2309419_2310439_+	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase	NA|72aa|down_9|NZ_CP012680.1_2310728_2310944_-	pfam04957, RMF, Ribosome modulation factor
GCF_001449085.1_ASM144908v1	NZ_CP012680	Pseudomonas brassicacearum strain LBUM300 chromosome, complete genome	4	3889026-3889121	4	CRISPRCasFinder	no		PD-DExK,DEDDh,RT,DinG,csa3,cas3,WYL	Orphan	CGACCTGGCTCTCCCGGTCGTAC	23	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,DEDDh,RT,DinG,csa3,cas3,WYL	NA,NA|134aa|down_0|NZ_CP012680.1_3889335_3889737_+	NA|555aa|up_9|NZ_CP012680.1_3878339_3880004_-	cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS)	NA|492aa|up_8|NZ_CP012680.1_3880266_3881742_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|98aa|up_7|NZ_CP012680.1_3881791_3882085_-	pfam07578, LAB_N, Lipid A Biosynthesis N-terminal domain	NA|248aa|up_6|NZ_CP012680.1_3882086_3882830_-	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|324aa|up_5|NZ_CP012680.1_3882863_3883835_-	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs	NA|339aa|up_4|NZ_CP012680.1_3884156_3885173_-	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|448aa|up_3|NZ_CP012680.1_3885184_3886528_-	PRK09428, pssA, CDP-diacylglycerol--serine O-phosphatidyltransferase	NA|188aa|up_2|NZ_CP012680.1_3886649_3887213_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|160aa|up_1|NZ_CP012680.1_3887249_3887729_+	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|321aa|up_0|NZ_CP012680.1_3887969_3888932_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|134aa|down_0|NZ_CP012680.1_3889335_3889737_+	NA	NA|808aa|down_1|NZ_CP012680.1_3889773_3892197_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|315aa|down_2|NZ_CP012680.1_3892264_3893209_-	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms]	NA|170aa|down_3|NZ_CP012680.1_3893208_3893718_-	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional	NA|174aa|down_4|NZ_CP012680.1_3894009_3894531_-	COG4875, COG4875, Uncharacterized protein conserved in bacteria with a cystatin-like fold [Function unknown]	NA|395aa|down_5|NZ_CP012680.1_3894704_3895889_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|223aa|down_6|NZ_CP012680.1_3895885_3896554_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|773aa|down_7|NZ_CP012680.1_3896544_3898863_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|156aa|down_8|NZ_CP012680.1_3898859_3899327_+	cd17551, REC_RpfG-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase response regulator RpfG and similar proteins	NA|299aa|down_9|NZ_CP012680.1_3899359_3900256_+	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]
