assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001454925.1_ASM145492v1	NZ_CP013289	Listeria monocytogenes strain WSLC 1047 chromosome, complete genome	1	1426741-1427325	1	CRT	no		cas3,DEDDh,casR,WYL,DinG,csa3	Orphan	CATATNAGTTACTGAACTNGTATCAAAATTACTTACATC	39	0	0	NA	NA	NA	7	7	Orphan	cas3,DEDDh,casR,WYL,DinG,csa3	NA|81aa|up_6|NZ_CP013289.1_1421537_1421780_-,NA|116aa|up_5|NZ_CP013289.1_1422183_1422531_-,NA|206aa|up_4|NZ_CP013289.1_1422840_1423458_-,NA|89aa|up_3|NZ_CP013289.1_1424193_1424460_-,NA|162aa|up_1|NZ_CP013289.1_1424868_1425354_-,NA|158aa|up_0|NZ_CP013289.1_1425373_1425847_-,NA	NA|120aa|up_9|NZ_CP013289.1_1418501_1418861_-	pfam11337, DUF3139, Protein of unknown function (DUF3139)	NA|276aa|up_8|NZ_CP013289.1_1418888_1419716_-	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family	NA|326aa|up_7|NZ_CP013289.1_1420477_1421455_+	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|81aa|up_6|NZ_CP013289.1_1421537_1421780_-	NA	NA|116aa|up_5|NZ_CP013289.1_1422183_1422531_-	NA	NA|206aa|up_4|NZ_CP013289.1_1422840_1423458_-	NA	NA|89aa|up_3|NZ_CP013289.1_1424193_1424460_-	NA	NA|102aa|up_2|NZ_CP013289.1_1424535_1424841_-	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain	NA|162aa|up_1|NZ_CP013289.1_1424868_1425354_-	NA	NA|158aa|up_0|NZ_CP013289.1_1425373_1425847_-	NA	NA|513aa|down_0|NZ_CP013289.1_1430228_1431767_-	pfam05043, Mga, Mga helix-turn-helix domain	NA|517aa|down_1|NZ_CP013289.1_1432400_1433951_-	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|367aa|down_2|NZ_CP013289.1_1433943_1435044_-	COG3535, COG3535, Uncharacterized conserved protein [Function unknown]	NA|428aa|down_3|NZ_CP013289.1_1435044_1436328_-	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|532aa|down_4|NZ_CP013289.1_1436462_1438058_-	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|316aa|down_5|NZ_CP013289.1_1438213_1439161_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|383aa|down_6|NZ_CP013289.1_1439165_1440314_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|720aa|down_7|NZ_CP013289.1_1440310_1442470_+	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|252aa|down_8|NZ_CP013289.1_1442586_1443342_+	pfam16160, DUF4866, Domain of unknown function (DUF4866)	NA|222aa|down_9|NZ_CP013289.1_1443362_1444028_+	COG3619, COG3619, Predicted membrane protein [Function unknown]
GCF_001454925.1_ASM145492v1	NZ_CP013289	Listeria monocytogenes strain WSLC 1047 chromosome, complete genome	2	1428971-1429149	1	CRISPRCasFinder	no		cas3,DEDDh,casR,WYL,DinG,csa3	Orphan	GAACTCGTATCAAAACTGCTTAA	23	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,casR,WYL,DinG,csa3	NA|81aa|up_7|NZ_CP013289.1_1421537_1421780_-,NA|116aa|up_6|NZ_CP013289.1_1422183_1422531_-,NA|206aa|up_5|NZ_CP013289.1_1422840_1423458_-,NA|89aa|up_4|NZ_CP013289.1_1424193_1424460_-,NA|162aa|up_2|NZ_CP013289.1_1424868_1425354_-,NA|158aa|up_1|NZ_CP013289.1_1425373_1425847_-,NA	NA|276aa|up_9|NZ_CP013289.1_1418888_1419716_-	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family	NA|326aa|up_8|NZ_CP013289.1_1420477_1421455_+	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|81aa|up_7|NZ_CP013289.1_1421537_1421780_-	NA	NA|116aa|up_6|NZ_CP013289.1_1422183_1422531_-	NA	NA|206aa|up_5|NZ_CP013289.1_1422840_1423458_-	NA	NA|89aa|up_4|NZ_CP013289.1_1424193_1424460_-	NA	NA|102aa|up_3|NZ_CP013289.1_1424535_1424841_-	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain	NA|162aa|up_2|NZ_CP013289.1_1424868_1425354_-	NA	NA|158aa|up_1|NZ_CP013289.1_1425373_1425847_-	NA	NA|690aa|up_0|NZ_CP013289.1_1425912_1427982_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|513aa|down_0|NZ_CP013289.1_1430228_1431767_-	pfam05043, Mga, Mga helix-turn-helix domain	NA|517aa|down_1|NZ_CP013289.1_1432400_1433951_-	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|367aa|down_2|NZ_CP013289.1_1433943_1435044_-	COG3535, COG3535, Uncharacterized conserved protein [Function unknown]	NA|428aa|down_3|NZ_CP013289.1_1435044_1436328_-	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|532aa|down_4|NZ_CP013289.1_1436462_1438058_-	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|316aa|down_5|NZ_CP013289.1_1438213_1439161_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|383aa|down_6|NZ_CP013289.1_1439165_1440314_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|720aa|down_7|NZ_CP013289.1_1440310_1442470_+	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|252aa|down_8|NZ_CP013289.1_1442586_1443342_+	pfam16160, DUF4866, Domain of unknown function (DUF4866)	NA|222aa|down_9|NZ_CP013289.1_1443362_1444028_+	COG3619, COG3619, Predicted membrane protein [Function unknown]
GCF_001454925.1_ASM145492v1	NZ_CP013289	Listeria monocytogenes strain WSLC 1047 chromosome, complete genome	3	1741483-1741637	2	CRISPRCasFinder	no	cas3	cas3,DEDDh,casR,WYL,DinG,csa3	Unclear	GTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAA	50	0	0	NA	NA	NA	1	1	Unclear	cas3,DEDDh,casR,WYL,DinG,csa3	NA,NA	cas3|1180aa|up_9|NZ_CP013289.1_1730559_1734099_-	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]	NA|187aa|up_8|NZ_CP013289.1_1734212_1734773_-	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	NA|195aa|up_7|NZ_CP013289.1_1734879_1735464_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|208aa|up_6|NZ_CP013289.1_1735553_1736177_-	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed	NA|314aa|up_5|NZ_CP013289.1_1736470_1737412_+	PRK00066, ldh, L-lactate dehydrogenase; Reviewed	NA|244aa|up_4|NZ_CP013289.1_1737432_1738164_+	pfam08713, DNA_alkylation, DNA alkylation repair enzyme	NA|111aa|up_3|NZ_CP013289.1_1738230_1738563_+	PRK01119, PRK01119, putative heavy metal-binding protein	NA|154aa|up_2|NZ_CP013289.1_1738615_1739077_-	COG4808, COG4808, Uncharacterized protein conserved in bacteria [Function unknown]	NA|108aa|up_1|NZ_CP013289.1_1739209_1739533_-	pfam17606, DUF5502, Family of unknown function (DUF5502)	NA|290aa|up_0|NZ_CP013289.1_1739604_1740474_-	smart00770, Zn_dep_PLPC, Zinc dependent phospholipase C (alpha toxin)	NA|511aa|down_0|NZ_CP013289.1_1742628_1744161_-	COG3227, LasB, Zinc metalloprotease (elastase) [Amino acid transport and metabolism]	NA|530aa|down_1|NZ_CP013289.1_1744495_1746085_-	pfam01289, Thiol_cytolysin, Thiol-activated cytolysin	NA|318aa|down_2|NZ_CP013289.1_1746327_1747281_+	cd00137, PI-PLCc, Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C	NA|238aa|down_3|NZ_CP013289.1_1747553_1748267_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|319aa|down_4|NZ_CP013289.1_1748310_1749267_-	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|458aa|down_5|NZ_CP013289.1_1749317_1750691_-	PRK14354, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA|103aa|down_6|NZ_CP013289.1_1751077_1751386_-	PRK13259, PRK13259, septation regulator SpoVG	NA|103aa|down_7|NZ_CP013289.1_1751504_1751813_-	PRK13259, PRK13259, septation regulator SpoVG	NA|403aa|down_8|NZ_CP013289.1_1752496_1753705_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|231aa|down_9|NZ_CP013289.1_1753701_1754394_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein
