The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013274	Bacillus thuringiensis strain CTC, complete genome	5327397	246482	254431	5327397		uncultured_virus(33.33%)	6	NA	NA
WP_000917306.1|246482_246767_+	co-chaperone GroES	NA	A0A221S3C8	uncultured_virus	53.8	1.2e-20
WP_001029997.1|246805_248440_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	58.2	5.9e-157
WP_060629299.1|248838_250386_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	31.2	3.4e-21
WP_060629300.1|250769_252095_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	29.2	2.7e-43
WP_001262950.1|252240_252942_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.9	4.3e-40
WP_060629301.1|252925_254431_+	aminopeptidase AmpS	NA	W8CYF6	Bacillus_phage	29.4	9.2e-32
>prophage 2
NZ_CP013274	Bacillus thuringiensis strain CTC, complete genome	5327397	286483	294855	5327397		Synechococcus_phage(50.0%)	8	NA	NA
WP_060629311.1|286483_287791_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	25.5	2.2e-21
WP_001170542.1|287879_288599_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	44.3	5.2e-49
WP_060629312.1|288591_288846_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_048375606.1|288842_289526_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_060629313.1|289509_291729_+	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	41.1	6.3e-162
WP_000879028.1|291713_293129_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.4	7.3e-55
WP_060629314.1|293230_294271_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	46.0	7.2e-68
WP_060629315.1|294267_294855_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.0	3.1e-28
>prophage 3
NZ_CP013274	Bacillus thuringiensis strain CTC, complete genome	5327397	778387	788604	5327397	holin	Bacillus_phage(75.0%)	9	NA	NA
WP_060629653.1|778387_779779_-	SH3 domain-containing protein	NA	A0A1X9SG46	Bacillus_phage	75.3	1.7e-27
WP_000402992.1|780695_781049_-	helix-turn-helix transcriptional regulator	NA	A0A288WFW4	Bacillus_phage	41.4	1.3e-16
WP_060629654.1|781417_781801_+	ArpU family transcriptional regulator	NA	Q9ZXB9	Bacillus_phage	44.6	6.6e-19
WP_000930103.1|782565_782985_+|holin	phage holin family protein	holin	A0A0S2MVC4	Bacillus_phage	73.0	7.4e-48
WP_000509862.1|782989_783973_+	N-acetylmuramoyl-L-alanine amidase	NA	A9QTG1	Bacillus_phage	77.4	4.1e-89
WP_060629655.1|784088_785390_+	C40 family peptidase	NA	A0A2I7SDE4	Paenibacillus_phage	30.4	2.9e-18
WP_060629656.1|785593_786640_+	3D domain-containing protein	NA	A0A173GB44	Bacillus_phage	44.1	5.1e-21
WP_048554256.1|786751_787927_-	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_000609104.1|787929_788604_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	2.1e-36
>prophage 4
NZ_CP013274	Bacillus thuringiensis strain CTC, complete genome	5327397	1894672	1903122	5327397		Bacillus_phage(71.43%)	8	NA	NA
WP_060630487.1|1894672_1896433_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	96.9	1.9e-270
WP_060633117.1|1896732_1897845_+	helix-turn-helix domain-containing protein	NA	A0A288TXV8	Enterococcus_phage	46.7	3.7e-78
WP_088116093.1|1898001_1898706_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	94.0	5.9e-122
WP_060630488.1|1898702_1899776_+	HAMP domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	90.5	2.0e-174
WP_088116068.1|1899800_1900394_-	DUF3139 domain-containing protein	NA	NA	NA	NA	NA
WP_088116067.1|1900575_1901304_+	3-ketoacyl-ACP reductase	NA	W8CYX9	Bacillus_phage	100.0	6.0e-61
WP_060630491.1|1901444_1902116_+	O-methyltransferase	NA	W8CYT3	Bacillus_phage	89.8	7.7e-63
WP_060630492.1|1902249_1903122_+	aminoglycoside 6-adenylyltransferase	NA	A0A1X9I6F2	Streptococcus_phage	44.0	1.4e-64
>prophage 5
NZ_CP013274	Bacillus thuringiensis strain CTC, complete genome	5327397	2512342	2517431	5327397		Bacillus_phage(90.0%)	12	NA	NA
WP_060630982.1|2512342_2512558_-	spore germination protein	NA	A0A2H4J3A3	uncultured_Caudovirales_phage	82.4	5.9e-25
WP_110093284.1|2512701_2512779_+	DUF3983 domain-containing protein	NA	NA	NA	NA	NA
WP_000041815.1|2512883_2513222_-	helix-turn-helix transcriptional regulator	NA	H0UST7	Bacillus_phage	54.3	4.8e-21
WP_060630983.1|2513391_2513601_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000522017.1|2513722_2513989_+	helix-turn-helix domain-containing protein	NA	A0A0U3ULL9	Bacillus_phage	75.3	4.1e-28
WP_060630985.1|2514347_2515052_+	DnaD domain protein	NA	A0A1B1P7T6	Bacillus_phage	85.9	7.2e-96
WP_033701691.1|2515020_2515824_+	ATP-binding protein	NA	A0A1B1P7U2	Bacillus_phage	98.9	5.6e-145
WP_000337981.1|2515839_2516034_+	hypothetical protein	NA	A0A0U3K3J8	Bacillus_phage	85.9	1.1e-25
WP_000805175.1|2516058_2516232_+	DUF3954 domain-containing protein	NA	A0A1B1P7U5	Bacillus_phage	94.7	6.2e-25
WP_060630986.1|2516246_2516501_+	hypothetical protein	NA	A0A0U3SU43	Bacillus_phage	91.7	4.2e-38
WP_000885287.1|2516513_2516933_+	hypothetical protein	NA	A0A1B1P8B9	Bacillus_phage	40.7	3.5e-13
WP_060630987.1|2516948_2517431_+	nucleoside triphosphate pyrophosphohydrolase family protein	NA	A0A0U4IBD0	Bacillus_phage	46.8	4.9e-19
>prophage 6
NZ_CP013274	Bacillus thuringiensis strain CTC, complete genome	5327397	2682934	2692074	5327397		Geobacillus_phage(25.0%)	11	NA	NA
WP_060631144.1|2682934_2684302_-	chitin-binding protein	NA	A0A0K1Y848	Apis_mellifera_filamentous_virus	38.1	2.8e-19
WP_060631145.1|2684658_2685852_-	glycosyl transferase family 1	NA	Q0IKX4	Leucania_separata_nucleopolyhedrovirus	28.2	2.1e-07
WP_060633144.1|2685937_2686582_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A075BUR2	Microcystis_phage	40.7	9.4e-34
WP_060631146.1|2686668_2687169_-	DNA topology modulation protein	NA	A0A097BYE2	Leuconostoc_phage	46.0	6.6e-43
WP_060631147.1|2687195_2687582_-	DUF2809 domain-containing protein	NA	NA	NA	NA	NA
WP_060631148.1|2687647_2688355_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	26.6	2.0e-16
WP_060631149.1|2688376_2688730_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_060631150.1|2688743_2689151_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_060631151.1|2689599_2690985_+	MBL fold metallo-hydrolase	NA	Q0H255	Geobacillus_phage	60.3	2.3e-77
WP_060631152.1|2690987_2691200_+	DUF3006 domain-containing protein	NA	Q0H256	Geobacillus_phage	52.9	3.3e-12
WP_060631153.1|2691267_2692074_-	N-acetylmuramoyl-L-alanine amidase	NA	D2XR33	Bacillus_phage	68.5	2.7e-107
>prophage 7
NZ_CP013274	Bacillus thuringiensis strain CTC, complete genome	5327397	4415030	4422711	5327397		Staphylococcus_phage(16.67%)	10	NA	NA
WP_000221087.1|4415030_4415954_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	44.0	2.4e-46
WP_060632460.1|4416078_4417014_-	HAMP domain-containing histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	26.2	1.5e-11
WP_060632461.1|4417015_4417708_-	response regulator transcription factor	NA	B5LWA6	Feldmannia_species_virus	28.8	8.0e-07
WP_001293585.1|4417876_4418050_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001014310.1|4418050_4418245_+	YwbE family protein	NA	NA	NA	NA	NA
WP_060632462.1|4418285_4419485_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	41.2	1.6e-71
WP_060632463.1|4419778_4420102_+	heme oxygenase	NA	NA	NA	NA	NA
WP_060632464.1|4420170_4420935_-	class B sortase	NA	NA	NA	NA	NA
WP_060632465.1|4420967_4421738_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.6	3.7e-13
WP_001036836.1|4421727_4422711_-	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	26.6	9.3e-17
>prophage 1
NZ_CP013273	Bacillus thuringiensis strain CTC plasmid, complete sequence	25529	245	23943	25529	capsid,portal	Lactococcus_phage(82.5%)	40	NA	NA
WP_036853255.1|245_770_+	hypothetical protein	NA	R9R0T6	Lactococcus_phage	100.0	2.5e-93
WP_036853254.1|766_997_+	hypothetical protein	NA	A0A1P8BLC3	Lactococcus_phage	88.2	2.3e-35
WP_060629148.1|1008_2631_+	hypothetical protein	NA	R9R108	Lactococcus_phage	98.7	0.0e+00
WP_036853146.1|2620_2905_+	HNH endonuclease	NA	M1IDC3	Lactococcus_phage	100.0	4.0e-53
WP_036853147.1|2917_4054_+|portal	phage portal protein	portal	B3TJN9	Lactococcus_virus	98.9	2.4e-210
WP_036853149.1|4567_5749_+	hypothetical protein	NA	M1I8D1	Lactococcus_phage	96.4	4.6e-204
WP_002820020.1|5769_6033_+	hypothetical protein	NA	R9R111	Lactococcus_phage	100.0	5.9e-43
WP_036853150.1|6032_6347_+	hypothetical protein	NA	Q09WP2	Lactococcus_virus	99.0	1.4e-51
WP_036853151.1|6336_6675_+	hypothetical protein	NA	R9R0Z2	Lactococcus_phage	99.1	6.8e-60
WP_036853152.1|6665_7031_+	hypothetical protein	NA	A0A023J3R0	Lactococcus_phage	95.9	6.2e-59
WP_060629149.1|7043_7949_+|capsid	capsid protein	capsid	A0A023J391	Lactococcus_phage	94.4	8.5e-150
WP_015979526.1|7986_8262_+	hypothetical protein	NA	R9R114	Lactococcus_phage	100.0	7.2e-44
WP_036853154.1|8281_8794_+	hypothetical protein	NA	R9R1U8	Lactococcus_phage	100.0	5.3e-64
WP_036853155.1|8793_11784_+	hypothetical protein	NA	R9R279	Lactococcus_phage	80.0	3.4e-203
WP_036853156.1|11783_12680_+	hypothetical protein	NA	Q09WN5	Lactococcus_virus	93.6	2.4e-165
WP_036853157.1|12679_13807_+	hypothetical protein	NA	Q09WN4	Lactococcus_virus	96.3	1.2e-209
WP_036853158.1|13796_14090_+	hypothetical protein	NA	Q09WN3	Lactococcus_virus	97.9	2.7e-49
WP_060629150.1|14079_15039_+	hypothetical protein	NA	Q1RNB3	Lactococcus_phage	88.7	1.4e-129
WP_036853160.1|15060_15414_+	hypothetical protein	NA	R9R1L0	Lactococcus_phage	94.0	1.3e-53
WP_060629151.1|15410_15791_+	hypothetical protein	NA	A0A126HDT8	Lactococcus_phage	48.4	3.4e-52
WP_015979569.1|16001_16193_-	hypothetical protein	NA	D3WAD8	Lactococcus_phage	100.0	3.4e-24
WP_015979536.1|16253_16520_-	hypothetical protein	NA	A0A023J399	Lactococcus_phage	100.0	2.8e-40
WP_015979538.1|16692_17040_-	hypothetical protein	NA	A0A023J2U8	Lactococcus_phage	100.0	9.4e-57
WP_015979539.1|17039_17276_-	hypothetical protein	NA	A0A023J3B7	Lactococcus_phage	100.0	1.1e-37
WP_015979540.1|17226_17484_-	hypothetical protein	NA	A0A023J3R3	Lactococcus_phage	100.0	2.0e-43
WP_015979541.1|17547_17934_-	DUF3310 domain-containing protein	NA	A0A023J3A1	Lactococcus_phage	100.0	1.0e-67
WP_015979543.1|18049_18235_-	hypothetical protein	NA	A0A023J2U9	Lactococcus_phage	100.0	9.8e-29
WP_015979544.1|18245_18569_-	DUF1140 family protein	NA	A0A023J3B8	Lactococcus_phage	100.0	1.0e-52
WP_110093195.1|18624_18870_-	hypothetical protein	NA	A0A1W6JH85	Lactococcus_phage	91.4	7.1e-43
WP_036851127.1|18907_19222_-	hypothetical protein	NA	C7T224	Lactococcus_virus	91.3	8.8e-46
WP_036851125.1|19306_19816_-	hypothetical protein	NA	R9R273	Lactococcus_phage	93.5	4.7e-73
WP_036851123.1|19812_20028_-	hypothetical protein	NA	R9R1M6	Lactococcus_lactis_phage	97.2	2.9e-32
WP_036851122.1|20040_20400_-	single-stranded DNA-binding protein	NA	R9R127	Lactococcus_phage	99.2	1.2e-59
WP_015979551.1|21080_21392_-	hypothetical protein	NA	A0A023J3A7	Lactococcus_phage	100.0	8.5e-49
WP_015979552.1|21449_21680_-	hypothetical protein	NA	A0A023J2W2	Lactococcus_phage	100.0	8.8e-35
WP_110093196.1|21676_21937_-	hypothetical protein	NA	A0A023J2V2	Lactococcus_phage	100.0	7.6e-43
WP_015979554.1|21893_22181_-	hypothetical protein	NA	A0A023J3C0	Lactococcus_phage	100.0	8.1e-46
WP_036851112.1|22621_22888_-	hypothetical protein	NA	R9R1X5	Lactococcus_phage	98.9	7.0e-44
WP_036851110.1|22838_23033_-	hypothetical protein	NA	R9R173	Lactococcus_phage	100.0	3.5e-29
WP_110093197.1|23025_23943_-	AAA family ATPase	NA	A0A2K8IKZ9	Lactococcus_phage	99.2	8.1e-132
