The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013178	Aeromonas hydrophila strain JBN2301 chromosome, complete genome	5127362	128492	135592	5127362	integrase,tRNA	Pseudomonas_phage(33.33%)	7	124525:124539	145593:145607
124525:124539	attL	TCGGCAATTTCAAAT	NA	NA	NA	NA
WP_059296225.1|128492_129542_+	TerC/Alx family metal homeostasis membrane protein	NA	A0A1D7XFL1	Escherichia_phage	46.3	6.3e-72
WP_059296226.1|129572_130154_+	TerD family protein	NA	A0A1J0GW82	Streptomyces_phage	25.9	8.8e-07
WP_059296227.1|130258_130837_+	TerD family protein	NA	W8EDB4	Pseudomonas_phage	31.4	4.8e-13
WP_059296228.1|131065_131566_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059296229.1|131593_132865_+	VWA domain-containing protein	NA	I7HXI7	Enterobacteria_phage	26.0	6.0e-16
WP_059296230.1|133222_134431_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1GNR7	Pseudomonas_phage	29.6	1.1e-35
WP_024945506.1|134755_135592_+|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	S4VW33	Pandoravirus	35.7	7.2e-18
145593:145607	attR	TCGGCAATTTCAAAT	NA	NA	NA	NA
>prophage 2
NZ_CP013178	Aeromonas hydrophila strain JBN2301 chromosome, complete genome	5127362	1046364	1054268	5127362	protease	Staphylococcus_phage(50.0%)	9	NA	NA
WP_011707102.1|1046364_1047618_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	53.5	2.3e-100
WP_016351738.1|1047701_1048181_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016351737.1|1048255_1048588_+	NIPSNAP family protein	NA	NA	NA	NA	NA
WP_010675395.1|1048710_1049160_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_016351736.1|1049256_1050366_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	35.2	2.7e-49
WP_016351735.1|1050420_1051074_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	36.6	7.1e-21
WP_016351734.1|1051215_1052325_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.0	7.9e-65
WP_043158851.1|1052388_1053600_-|protease	serine protease	protease	V5LS29	Emiliania_huxleyi_virus	26.9	8.8e-09
WP_016351731.1|1053797_1054268_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.7	3.5e-30
>prophage 3
NZ_CP013178	Aeromonas hydrophila strain JBN2301 chromosome, complete genome	5127362	1702297	1804279	5127362	transposase,integrase,portal,holin,plate,head,tail,capsid,terminase	Aeromonas_virus(69.77%)	101	1778359:1778377	1806222:1806240
WP_080644415.1|1702297_1703848_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_075384634.1|1704020_1704734_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043158960.1|1705325_1705904_-	TIR domain-containing protein	NA	NA	NA	NA	NA
WP_016351278.1|1705924_1706392_-	TIR domain-containing protein	NA	NA	NA	NA	NA
WP_075384633.1|1706394_1707843_-	SIR2 family protein	NA	NA	NA	NA	NA
WP_016351274.1|1708149_1709826_-	protein kinase family protein	NA	NA	NA	NA	NA
WP_016351273.1|1709829_1710567_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016351272.1|1710569_1711403_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_043119159.1|1712424_1713114_+	B3/4 domain-containing protein	NA	NA	NA	NA	NA
WP_016351270.1|1713219_1714530_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
WP_016351269.1|1714615_1715509_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_043119700.1|1715643_1716729_+	MFS transporter	NA	NA	NA	NA	NA
WP_016351267.1|1716853_1717324_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_016351266.1|1717448_1718303_+	EamA family transporter	NA	NA	NA	NA	NA
WP_043119158.1|1718371_1719781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075384632.1|1720905_1722111_+	cobalamin biosynthesis protein CobQ	NA	NA	NA	NA	NA
WP_016351263.1|1722103_1723894_+	ThiF family adenylyltransferase	NA	NA	NA	NA	NA
WP_075384631.1|1723865_1724369_+	Mov34/MPN/PAD-1 family protein	NA	NA	NA	NA	NA
WP_016351262.1|1724358_1724895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043119698.1|1725040_1725493_-	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_075384630.1|1725604_1725796_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075384629.1|1725910_1726186_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016351260.1|1726549_1726957_+	H-NS histone family protein	NA	NA	NA	NA	NA
WP_016351259.1|1727018_1727279_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043119156.1|1727354_1728482_-	Fic family protein	NA	D7RWK9	Brochothrix_phage	26.9	4.1e-08
WP_016351256.1|1729092_1730196_-	DUF3289 family protein	NA	NA	NA	NA	NA
WP_075384627.1|1730439_1730646_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_016351254.1|1730764_1731328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016351252.1|1733503_1735273_+	lipid A ABC transporter ATP-binding protein/permease MsbA	NA	W8CYL7	Bacillus_phage	32.2	4.8e-56
WP_016351251.1|1735272_1736274_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_011706581.1|1736396_1736585_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_016351249.1|1736581_1737343_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_011706579.1|1737555_1738200_+	UvrY/SirA/GacA family response regulator transcription factor	NA	NA	NA	NA	NA
WP_043119154.1|1738388_1740239_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_011706577.1|1740542_1741097_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_060615867.1|1742522_1744133_-	hypothetical protein	NA	A5X9J8	Aeromonas_virus	73.2	3.7e-236
WP_060615868.1|1744129_1744693_-	hypothetical protein	NA	A5X9J7	Aeromonas_virus	70.9	2.8e-58
WP_060615917.1|1744689_1745133_-	hypothetical protein	NA	A5X9J6	Aeromonas_virus	53.3	2.1e-32
WP_081329124.1|1745399_1748303_-|tail	phage tail protein	tail	A5X9J3	Aeromonas_virus	60.3	6.0e-96
WP_060615869.1|1748302_1748983_-|tail	phage tail protein	tail	A5X9J2	Aeromonas_virus	75.3	2.2e-86
WP_060615870.1|1748975_1750163_-|plate	baseplate J/gp47 family protein	plate	A5X9J1	Aeromonas_virus	79.8	2.6e-178
WP_016352032.1|1750159_1750483_-	DUF2590 family protein	NA	A5X9J0	Aeromonas_virus	86.9	1.1e-46
WP_060615871.1|1750482_1752252_-|tail	phage tail tape measure protein	tail	A5X9I9	Aeromonas_virus	74.6	1.9e-254
WP_173664814.1|1752258_1752402_-	hypothetical protein	NA	A5X9I8	Aeromonas_virus	85.1	3.7e-15
WP_060615872.1|1752443_1752707_-|tail	putative phage tail assembly chaperone	tail	A5X9I7	Aeromonas_virus	81.7	7.9e-32
WP_060615873.1|1752830_1753274_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060615874.1|1753270_1753750_-	TIGR02594 family protein	NA	A0A1I9KFD8	Aeromonas_phage	73.0	1.4e-66
WP_049045767.1|1753749_1754064_-|holin	phage holin, lambda family	holin	A5X9I3	Aeromonas_virus	60.4	2.7e-26
WP_060615875.1|1754085_1754295_-	TraR/DksA family transcriptional regulator	NA	A5X9I2	Aeromonas_virus	71.2	2.5e-20
WP_060615876.1|1754298_1754754_-	DUF2597 family protein	NA	A5X9I1	Aeromonas_virus	84.8	3.4e-70
WP_060615877.1|1754757_1755882_-	DUF2586 family protein	NA	A5X9I0	Aeromonas_virus	81.8	1.3e-176
WP_060615878.1|1755886_1756573_-	phage virion morphogenesis protein	NA	A5X9H9	Aeromonas_virus	87.3	4.7e-108
WP_173664815.1|1756569_1757094_-|tail	phage tail protein	tail	A5X9H8	Aeromonas_virus	82.8	1.6e-84
WP_060615880.1|1757090_1757552_-|head	head completion/stabilization protein	head	A5X9H7	Aeromonas_virus	92.8	1.4e-68
WP_060615881.1|1757722_1758451_-|terminase	terminase endonuclease subunit	terminase	A5X9H6	Aeromonas_virus	90.5	1.4e-123
WP_060615882.1|1758454_1759504_-|capsid	phage major capsid protein, P2 family	capsid	A5X9H5	Aeromonas_virus	86.4	1.1e-172
WP_060615883.1|1759513_1760371_-|capsid	GPO family capsid scaffolding protein	capsid	A5X9H4	Aeromonas_virus	81.0	1.1e-127
WP_060615884.1|1760546_1762367_+|terminase	terminase	terminase	A5X9H3	Aeromonas_virus	90.8	0.0e+00
WP_060615885.1|1762363_1763377_+|portal	phage portal protein	portal	A5X9H1	Aeromonas_virus	90.2	4.3e-182
WP_049045784.1|1763442_1763694_+	ogr/Delta-like zinc finger family protein	NA	A5X9H0	Aeromonas_virus	85.5	1.7e-36
WP_158506242.1|1763736_1763907_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060615886.1|1764073_1764427_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_139118713.1|1764750_1765575_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060615887.1|1765811_1766144_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060615888.1|1766261_1766480_-	hypothetical protein	NA	A5X9G7	Aeromonas_virus	73.6	1.9e-23
WP_060615889.1|1766476_1766959_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060615890.1|1766961_1767456_-	hypothetical protein	NA	A5X9G5	Aeromonas_virus	86.0	1.5e-76
WP_060615891.1|1767729_1770018_-	replication endonuclease	NA	A5X9G4	Aeromonas_virus	76.2	0.0e+00
WP_060615892.1|1770021_1770267_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081329128.1|1770263_1770572_-	hypothetical protein	NA	A5X9G2	Aeromonas_virus	62.0	8.7e-22
WP_060615893.1|1770709_1770907_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060615894.1|1770903_1771164_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_041213699.1|1771166_1771355_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042067791.1|1771420_1771879_-	hypothetical protein	NA	A5X9F8	Aeromonas_virus	84.2	5.1e-66
WP_029299976.1|1771889_1772399_-	phage regulatory CII family protein	NA	A5X9F7	Aeromonas_virus	69.8	7.6e-63
WP_060615895.1|1772391_1772661_-	hypothetical protein	NA	Q1I116	Pasteurella_virus	45.8	2.8e-08
WP_060615896.1|1772686_1772875_-	Cro/Cl family transcriptional regulator	NA	M4R204	Salicola_phage	49.1	2.2e-07
WP_060615897.1|1772998_1773694_+	helix-turn-helix domain-containing protein	NA	A0A1I9KG86	Aeromonas_phage	44.2	2.4e-43
WP_139118714.1|1773728_1775024_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081329126.1|1775101_1776157_+	N-acetyltransferase	NA	Q6SE88	Lactobacillus_prophage	40.3	7.8e-62
WP_060615898.1|1776134_1776506_+	hypothetical protein	NA	Q6SE87	Lactobacillus_prophage	48.4	2.2e-27
WP_060615899.1|1776623_1777679_+|integrase	site-specific integrase	integrase	A5X9F3	Aeromonas_virus	58.6	4.8e-112
WP_060615900.1|1777709_1778072_+	hypothetical protein	NA	NA	NA	NA	NA
1778359:1778377	attL	GGGGGTACTTTTGGGGGTA	NA	NA	NA	NA
WP_016351247.1|1778504_1779710_+|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	45.7	3.5e-90
WP_016351246.1|1779952_1780162_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_059296245.1|1780172_1780373_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075384578.1|1780598_1781126_+	ash family protein	NA	NA	NA	NA	NA
WP_016351244.1|1781277_1781538_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016351243.1|1781661_1783926_+	DUF927 domain-containing protein	NA	A0A1B0VP75	Pseudomonas_phage	33.5	8.3e-69
WP_016351240.1|1785575_1787087_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_172400591.1|1787456_1788305_+	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_016351238.1|1788453_1790388_+	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)	NA	E5EQ70	Micromonas_sp._RCC1109_virus	23.8	1.8e-27
WP_016351235.1|1792184_1793171_+	inositol 2-dehydrogenase	NA	NA	NA	NA	NA
WP_016351234.1|1793202_1794132_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_016351233.1|1794180_1795728_+	sugar ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.7	3.5e-10
WP_016351232.1|1795739_1796768_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_016351231.1|1796776_1797910_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_016351230.1|1797922_1799827_+	5-dehydro-2-deoxygluconokinase	NA	NA	NA	NA	NA
WP_016351229.1|1799838_1800729_+	myo-inosose-2 dehydratase	NA	NA	NA	NA	NA
WP_016351228.1|1800780_1801602_+	5-deoxy-glucuronate isomerase	NA	NA	NA	NA	NA
WP_118836319.1|1803075_1804279_+|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	69.8	1.5e-112
1806222:1806240	attR	GGGGGTACTTTTGGGGGTA	NA	NA	NA	NA
>prophage 4
NZ_CP013178	Aeromonas hydrophila strain JBN2301 chromosome, complete genome	5127362	2489674	2504611	5127362	integrase	Aeromonas_phage(75.0%)	20	2487485:2487499	2503585:2503599
2487485:2487499	attL	TCCTGCTCGGTGTAG	NA	NA	NA	NA
WP_016350745.1|2489674_2492227_+	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	36.3	8.8e-43
WP_011706069.1|2492342_2492672_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_052445780.1|2492699_2493980_-|integrase	site-specific integrase	integrase	R9TMP3	Vibrio_phage	31.2	2.0e-43
WP_041218119.1|2494782_2495361_-	phage N-6-adenine-methyltransferase	NA	A0A1I9KF87	Aeromonas_phage	89.1	5.2e-100
WP_043158981.1|2495391_2496480_-	hypothetical protein	NA	A0A1I9KFA0	Aeromonas_phage	87.2	5.5e-87
WP_052445781.1|2496528_2497506_-	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	92.9	1.0e-177
WP_043158982.1|2497502_2498348_-	PD-(D/E)XK nuclease-like domain-containing protein	NA	A0A1I9KFF5	Aeromonas_phage	95.0	5.9e-161
WP_041218121.1|2498344_2498710_-	hypothetical protein	NA	A0A1I9KFC9	Aeromonas_phage	69.4	2.3e-37
WP_075384274.1|2498712_2498904_-	hypothetical protein	NA	A0A1I9KG01	Aeromonas_phage	61.3	6.6e-12
WP_043158983.1|2499191_2499689_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017766129.1|2499685_2499970_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_043158984.1|2500168_2500522_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043158985.1|2500831_2501077_-	hypothetical protein	NA	A0A1I9KF98	Aeromonas_phage	82.7	1.5e-29
WP_043158986.1|2501376_2501556_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075384243.1|2501794_2502406_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_043158988.1|2502538_2502757_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043158989.1|2502798_2503188_+	hypothetical protein	NA	A0A1I9KF96	Aeromonas_phage	87.3	3.0e-51
WP_041218129.1|2503192_2503411_+	hypothetical protein	NA	A0A1I9KFG0	Aeromonas_phage	94.4	3.1e-29
WP_017766136.1|2503607_2503853_+	hypothetical protein	NA	NA	NA	NA	NA
2503585:2503599	attR	CTACACCGAGCAGGA	NA	NA	NA	NA
WP_043158990.1|2503849_2504611_+	helix-turn-helix domain-containing protein	NA	Q8HA96	Salmonella_phage	76.9	9.4e-33
>prophage 5
NZ_CP013178	Aeromonas hydrophila strain JBN2301 chromosome, complete genome	5127362	2512190	2546897	5127362	holin,terminase	Aeromonas_phage(83.33%)	41	NA	NA
WP_043158995.1|2512190_2512706_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	53.1	7.2e-45
WP_138135592.1|2512695_2513589_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_043158996.1|2514022_2514643_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052445783.1|2514808_2515423_+	Rha family transcriptional regulator	NA	A0A2I6PG18	Plesiomonas_phage	49.4	3.9e-37
WP_043158997.1|2515419_2515860_+	recombination protein NinB	NA	A0A1I9KFA6	Aeromonas_phage	95.1	3.7e-74
WP_043158999.1|2515856_2516279_+	hypothetical protein	NA	A0A1I9KG18	Aeromonas_phage	81.4	5.7e-64
WP_043159000.1|2516275_2516977_+	hypothetical protein	NA	A0A1I9KFB9	Aeromonas_phage	85.4	4.6e-103
WP_043159001.1|2517044_2517803_-	cytolytic delta-endotoxin (insecticidal protein)	NA	NA	NA	NA	NA
WP_043159002.1|2518325_2519606_-	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	56.1	3.4e-128
WP_041215973.1|2519602_2520025_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	51.6	8.3e-31
WP_043159003.1|2520183_2520600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043159207.1|2520599_2520794_+	DUF3283 family protein	NA	NA	NA	NA	NA
WP_138135574.1|2520996_2521266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043159208.1|2521228_2521639_+	H-NS histone family protein	NA	NA	NA	NA	NA
WP_080765138.1|2521787_2522255_+	type VI secretion system PAAR protein	NA	E3SST2	Prochlorococcus_phage	46.6	4.6e-06
WP_052445785.1|2522265_2523243_+	S-type pyocin domain-containing protein	NA	NA	NA	NA	NA
WP_075384247.1|2523242_2523737_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138135575.1|2523885_2524428_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043159004.1|2524540_2524858_+|holin	phage holin family protein	holin	A0A1I9KFB8	Aeromonas_phage	95.2	1.4e-51
WP_043159005.1|2524857_2525337_+	TIGR02594 family protein	NA	A0A1I9KGA3	Aeromonas_phage	97.4	1.0e-85
WP_042880547.1|2525392_2525617_+	hypothetical protein	NA	A0A1I9KFG6	Aeromonas_phage	100.0	1.7e-30
WP_043159006.1|2525618_2525849_+	hypothetical protein	NA	A0A1I9KFC5	Aeromonas_phage	82.9	1.4e-27
WP_043159008.1|2525896_2526082_+	hypothetical protein	NA	A0A1I9KFC1	Aeromonas_phage	86.9	3.1e-22
WP_043159010.1|2526082_2526973_+	hypothetical protein	NA	A0A1I9KFG9	Aeromonas_phage	76.1	6.5e-102
WP_138135576.1|2527008_2527671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043159011.1|2527726_2529424_+|terminase	terminase	terminase	A0A1I9KFB6	Aeromonas_phage	95.9	0.0e+00
WP_043159013.1|2529423_2531550_+	OmpH family outer membrane protein	NA	A0A1I9KFF7	Aeromonas_phage	95.5	0.0e+00
WP_043159014.1|2531845_2532784_+	hypothetical protein	NA	A0A1I9KFD1	Aeromonas_phage	87.8	5.8e-141
WP_043159016.1|2532855_2534073_+	DUF4043 family protein	NA	A0A1I9KFC6	Aeromonas_phage	92.3	6.2e-220
WP_043159019.1|2534136_2534526_+	hypothetical protein	NA	A0A1I9KGB3	Aeromonas_phage	90.7	2.5e-58
WP_043159020.1|2534587_2535028_+	hypothetical protein	NA	A0A1I9KFH0	Aeromonas_phage	81.6	8.3e-50
WP_043159023.1|2535030_2535612_+	hypothetical protein	NA	A0A1I9KFD5	Aeromonas_phage	85.5	1.0e-92
WP_043159025.1|2535621_2536299_+	hypothetical protein	NA	A0A1I9KFD0	Aeromonas_phage	78.2	2.7e-100
WP_043159026.1|2536311_2537949_+	hypothetical protein	NA	A0A1I9KFH7	Aeromonas_phage	77.7	1.3e-60
WP_043159214.1|2538364_2539969_+	hypothetical protein	NA	A0A1I9KFD2	Aeromonas_phage	82.4	1.1e-269
WP_118836324.1|2542158_2543859_+	DUF1983 domain-containing protein	NA	A0A1I9KGC4	Aeromonas_phage	53.6	5.6e-70
WP_043159031.1|2543855_2544215_+	hypothetical protein	NA	A0A1I9KFI0	Aeromonas_phage	75.6	5.2e-50
WP_043159033.1|2544224_2544857_+	hypothetical protein	NA	A0A1I9KFE8	Aeromonas_phage	85.4	9.0e-90
WP_043159035.1|2544867_2545248_+	hypothetical protein	NA	A0A1I9KFD7	Aeromonas_phage	83.1	2.3e-48
WP_043159036.1|2545247_2545487_+	hypothetical protein	NA	A0A1I9KFI4	Aeromonas_phage	63.5	1.7e-17
WP_043159037.1|2545496_2546897_+	hypothetical protein	NA	A0A1I9KFD9	Aeromonas_phage	71.0	1.7e-181
>prophage 6
NZ_CP013178	Aeromonas hydrophila strain JBN2301 chromosome, complete genome	5127362	2676037	2692512	5127362	tRNA	Hokovirus(12.5%)	12	NA	NA
WP_016350665.1|2676037_2679997_-	transporter substrate-binding domain-containing protein	NA	A0A1V0SGX0	Hokovirus	36.8	2.6e-33
WP_005300715.1|2680051_2680348_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	35.6	3.0e-11
WP_016350664.1|2680351_2682739_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	24.5	1.8e-05
WP_016350663.1|2682751_2683735_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	44.0	1.5e-35
WP_005300683.1|2684050_2684407_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_005300673.1|2684422_2684620_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_075384255.1|2684706_2685255_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	37.9	4.9e-15
WP_016350661.1|2685258_2687187_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.9	2.8e-126
WP_016350660.1|2687423_2688011_-	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_016350659.1|2688185_2689241_+	PA0069 family radical SAM protein	NA	A0A1C9EG97	Acidianus_two-tailed_virus	28.6	2.4e-10
WP_016350658.1|2689271_2689442_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011706172.1|2689764_2692512_-	DNA topoisomerase (ATP-hydrolyzing) subunit A	NA	G3M9Z5	Bacillus_virus	34.9	1.3e-108
>prophage 7
NZ_CP013178	Aeromonas hydrophila strain JBN2301 chromosome, complete genome	5127362	2964247	3009918	5127362	plate,tRNA,protease	uncultured_Mediterranean_phage(14.29%)	37	NA	NA
WP_016350462.1|2964247_2965006_-|tRNA	tRNA-(ms[2]io[6]A)-hydroxylase	tRNA	NA	NA	NA	NA
WP_016350461.1|2965190_2966711_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	42.6	1.4e-88
WP_011705745.1|2966732_2967221_-	CvpA family protein	NA	NA	NA	NA	NA
WP_016350460.1|2967407_2968703_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	49.9	5.2e-92
WP_016350459.1|2969043_2970381_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	41.7	4.0e-79
WP_043119633.1|2970531_2971140_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_043118961.1|2971216_2973739_-	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	48.4	4.7e-89
WP_005300047.1|2973940_2974432_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA	NA
WP_075384527.1|2974581_2974812_+	alanine dehydrogenase	NA	NA	NA	NA	NA
WP_016350456.1|2975412_2976363_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.5	2.4e-62
WP_016350455.1|2976420_2977668_+	response regulator	NA	A0A127AWB9	Bacillus_phage	32.2	6.5e-15
WP_016350454.1|2977778_2978249_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_016350453.1|2978268_2978976_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_011705735.1|2978972_2979689_+	arginyltransferase	NA	NA	NA	NA	NA
WP_005300033.1|2979758_2979977_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_016350452.1|2980046_2982299_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	43.7	2.0e-168
WP_005300028.1|2982358_2982676_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	49.4	2.4e-14
WP_005300025.1|2982904_2983123_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	63.2	1.2e-17
WP_016350451.1|2983229_2984093_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	31.2	1.8e-27
WP_059296255.1|2984990_2985500_-	hypothetical protein	NA	NA	NA	NA	NA
WP_134984286.1|2985787_2986186_-	hypothetical protein	NA	NA	NA	NA	NA
WP_155398508.1|2986191_2988882_-	glycoside hydrolase family 19 protein	NA	A0A2H4JHX4	uncultured_Caudovirales_phage	32.8	9.1e-06
WP_043159061.1|2988922_2990971_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	27.1	6.0e-34
WP_017411057.1|2990981_2991269_-	type VI secretion system PAAR protein	NA	G4KK81	Yersinia_phage	39.4	2.3e-08
WP_043159063.1|2991526_2992957_-	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_043159065.1|2993003_2996489_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_043159066.1|2996530_2997976_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_043159068.1|2997984_2998590_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
WP_043159070.1|2998589_3000128_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_043159072.1|3000130_3002773_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	32.8	2.8e-92
WP_010634228.1|3002793_3003573_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_029301183.1|3003595_3004930_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_011705718.1|3004932_3005448_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_043159074.1|3005447_3006698_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_017411067.1|3006754_3007753_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_043159076.1|3007716_3009483_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_011705714.1|3009486_3009918_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 8
NZ_CP013178	Aeromonas hydrophila strain JBN2301 chromosome, complete genome	5127362	3464722	3475795	5127362	head	Shigella_phage(50.0%)	16	NA	NA
WP_016350132.1|3464722_3465136_-	DUF1320 family protein	NA	B7SDP4	Haemophilus_phage	36.4	1.3e-15
WP_016350131.1|3465137_3465587_-	Rho termination factor N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_016350130.1|3465690_3466599_-|head	Mu-like prophage major head subunit gpT family protein	head	A0A0C4UQR9	Shigella_phage	57.2	7.4e-101
WP_016350129.1|3466643_3467792_-	hypothetical protein	NA	A0A0C4UQU6	Shigella_phage	43.5	2.1e-68
WP_016350128.1|3468014_3468461_-	phage virion morphogenesis protein	NA	Q5ZQY1	Pseudomonas_phage	32.9	4.8e-13
WP_016350127.1|3468460_3468661_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016350126.1|3468680_3470150_-	hypothetical protein	NA	A0A2H4IYU7	uncultured_Caudovirales_phage	52.7	1.5e-63
WP_016350125.1|3470149_3471739_-	DUF935 domain-containing protein	NA	J9SVY0	Pseudomonas_phage	48.4	2.1e-119
WP_016350124.1|3471738_3473292_-	hypothetical protein	NA	A0A0C4UR29	Shigella_phage	58.4	5.7e-162
WP_016350123.1|3473291_3473867_-	DUF3486 family protein	NA	A0A0C4UQU5	Shigella_phage	68.9	3.6e-61
WP_005345917.1|3473869_3474166_-	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	57.0	6.2e-17
WP_016350122.1|3474162_3474477_-	DUF2730 family protein	NA	NA	NA	NA	NA
WP_016350121.1|3474457_3474685_-	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA	NA
WP_005353373.1|3474706_3474928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016350120.1|3474920_3475223_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043118779.1|3475219_3475795_-	secretion activator protein	NA	B0ZSJ3	Halomonas_phage	30.4	3.7e-13
>prophage 9
NZ_CP013178	Aeromonas hydrophila strain JBN2301 chromosome, complete genome	5127362	4036451	4093080	5127362	portal,protease,head,tail,capsid,terminase	Klebsiella_phage(17.65%)	52	NA	NA
WP_016349705.1|4036451_4038830_-|protease	metalloprotease	protease	NA	NA	NA	NA
WP_016349704.1|4038902_4041512_-	chitinase	NA	A0A097P8Z3	Sucra_jujuba_nucleopolyhedrovirus	60.4	2.6e-199
WP_016349703.1|4041884_4045385_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_016349702.1|4045601_4046213_+	DUF2975 domain-containing protein	NA	NA	NA	NA	NA
WP_011704909.1|4046220_4046430_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_016349701.1|4046535_4047675_-	3-phenylpropionate MFS transporter	NA	NA	NA	NA	NA
WP_016349700.1|4047963_4050057_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_016349699.1|4050245_4051214_+	ChaN family lipoprotein	NA	NA	NA	NA	NA
WP_016349698.1|4051274_4051826_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_016349697.1|4051865_4052270_+	lipoprotein	NA	NA	NA	NA	NA
WP_010634920.1|4052339_4052897_-	heme utilization protein HutZ	NA	NA	NA	NA	NA
WP_011704903.1|4052893_4053406_-	heme utilization cystosolic carrier protein HutX	NA	NA	NA	NA	NA
WP_016349696.1|4053574_4054414_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_016349695.1|4054410_4055442_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_016349694.1|4055456_4056245_+	heme ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	27.8	7.7e-14
WP_011704899.1|4056357_4056984_-	YitT family protein	NA	NA	NA	NA	NA
WP_016349693.1|4057305_4058319_+	NAD-dependent epimerase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	28.0	8.1e-32
WP_016349692.1|4058324_4059236_-	EamA family transporter	NA	NA	NA	NA	NA
WP_016349691.1|4059292_4060096_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_043118603.1|4060158_4061418_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA	NA
WP_016349689.1|4061443_4062271_-	xanthosine phosphorylase	NA	NA	NA	NA	NA
WP_016349688.1|4062601_4063540_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011704892.1|4063695_4063884_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080765144.1|4063938_4064244_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011704890.1|4064428_4065283_+	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	46.7	2.4e-21
WP_016349686.1|4065391_4066228_+	MTA/SAH nucleosidase	NA	NA	NA	NA	NA
WP_043118598.1|4066318_4066828_-	YgjV family protein	NA	NA	NA	NA	NA
WP_016349684.1|4066885_4067461_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_016349683.1|4068186_4068411_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349681.1|4070326_4070731_-	hypothetical protein	NA	A0A0M3VI90	Ralstonia_phage	42.2	1.8e-14
WP_016349680.1|4070733_4072314_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349679.1|4072317_4073517_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060615909.1|4073556_4077150_-	hypothetical protein	NA	A0A0M4U447	Ralstonia_phage	43.1	7.3e-277
WP_016349677.1|4077146_4077530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349676.1|4077529_4081102_-	tape measure protein	NA	A0A2I7S9D9	Vibrio_phage	34.5	1.6e-34
WP_134984435.1|4081167_4081716_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349675.1|4082071_4082821_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349674.1|4082860_4083283_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349673.1|4083279_4083837_-	hypothetical protein	NA	NA	NA	NA	NA
WP_118836289.1|4083836_4084376_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349671.1|4084384_4084696_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4J8C5	uncultured_Caudovirales_phage	43.2	2.8e-12
WP_016349670.1|4084698_4085154_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349669.1|4085225_4086512_-|capsid	phage major capsid protein	capsid	Q6UAX6	Klebsiella_phage	62.4	1.4e-142
WP_016349668.1|4086580_4087516_-	S49 family peptidase	NA	Q6UAX7	Klebsiella_phage	50.8	2.5e-80
WP_016349667.1|4087503_4088757_-|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	62.1	1.7e-151
WP_016349666.1|4088756_4088945_-	hypothetical protein	NA	A0A1B5FP99	Escherichia_phage	65.8	4.5e-05
WP_016349665.1|4088938_4090660_-|terminase	terminase large subunit	terminase	U5P0Q5	Shigella_phage	74.2	7.1e-254
WP_043118588.1|4090669_4091155_-|terminase	phage terminase small subunit P27 family	terminase	A0A2D1GNP3	Pseudomonas_phage	59.5	1.1e-47
WP_043119580.1|4091250_4091631_-	HNH endonuclease	NA	A0A1V0E8A5	Vibrio_phage	53.0	2.4e-29
WP_016349662.1|4091714_4091999_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_016349661.1|4092049_4092589_-	DUF2514 family protein	NA	A0A059VF51	Pseudomonas_phage	39.5	9.0e-14
WP_016349660.1|4092588_4093080_-	lysozyme	NA	D6QWN8	uncultured_phage	38.1	4.4e-15
>prophage 10
NZ_CP013178	Aeromonas hydrophila strain JBN2301 chromosome, complete genome	5127362	4106921	4115900	5127362		Enterobacteria_phage(33.33%)	14	NA	NA
WP_043159142.1|4106921_4107212_-	phage related protein gp8	NA	Q3HQZ9	Burkholderia_phage	54.5	5.2e-24
WP_016349649.1|4107295_4108285_-	DUF968 domain-containing protein	NA	A0A1V0E819	Vibrio_phage	31.0	2.1e-32
WP_016349648.1|4108281_4108545_-	hypothetical protein	NA	NA	NA	NA	NA
WP_134984434.1|4108612_4109089_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349647.1|4109288_4109684_-	DUF4406 domain-containing protein	NA	A0A1B0YZW9	Pseudomonas_phage	35.8	4.4e-10
WP_016349646.1|4109673_4110156_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349644.1|4110370_4111069_-	phage antirepressor KilAC domain-containing protein	NA	A0A1I9KFA9	Aeromonas_phage	63.6	1.0e-78
WP_016349643.1|4111085_4111340_-	hypothetical protein	NA	A0A1I9KFB1	Aeromonas_phage	46.8	6.8e-12
WP_043159231.1|4111339_4111720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016349641.1|4111808_4112930_-	conserved phage C-terminal domain-containing protein	NA	A5VW95	Enterobacteria_phage	32.4	1.5e-15
WP_016349640.1|4113052_4114009_-	Rha family phage regulatory protein	NA	A0A1C9IHV9	Salmonella_phage	41.5	2.1e-45
WP_016349639.1|4114403_4114901_-	phage regulatory CII family protein	NA	NA	NA	NA	NA
WP_016349638.1|4114919_4115126_-	helix-turn-helix transcriptional regulator	NA	K7PKH4	Enterobacteria_phage	57.4	1.4e-15
WP_043118571.1|4115228_4115900_+	helix-turn-helix domain-containing protein	NA	K7PH19	Enterobacteria_phage	44.0	1.9e-37
>prophage 11
NZ_CP013178	Aeromonas hydrophila strain JBN2301 chromosome, complete genome	5127362	4255316	4265252	5127362	tRNA	uncultured_Mediterranean_phage(25.0%)	10	NA	NA
WP_073348937.1|4255316_4257182_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	32.6	1.1e-34
WP_016349544.1|4257395_4259183_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.1	5.2e-74
WP_016349543.1|4259271_4259715_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	48.6	1.7e-26
WP_005309452.1|4259730_4259946_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_016349542.1|4260125_4261139_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.3	6.9e-108
WP_011704778.1|4261223_4262207_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.1	1.7e-34
WP_043118488.1|4262254_4263295_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A0A7NU10	Lactobacillus_phage	35.6	1.1e-12
WP_016349540.1|4263305_4263887_-	DedA family protein	NA	NA	NA	NA	NA
WP_016349539.1|4263883_4264501_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.4	5.3e-34
WP_016349538.1|4264505_4265252_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.7	2.1e-69
