The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP013253	Escherichia coli strain CQSW20 chromosome, complete genome	4579074	939035	950246	4579074	integrase,tail	Enterobacteria_phage(57.14%)	15	935345:935361	952256:952272
935345:935361	attL	GGTTGTCGATACCAATA	NA	NA	NA	NA
WP_001163428.1|939035_939236_-	response regulator inhibitor TorI	NA	K7P7V0	Enterobacteria_phage	100.0	2.4e-33
WP_000206809.1|939367_939673_-	hypothetical protein	NA	U5P0J0	Shigella_phage	96.0	2.2e-49
WP_001242717.1|939672_940035_-	phage protein	NA	K7PH61	Enterobacteria_phage	99.1	2.0e-65
WP_000008183.1|940025_940562_-	5'-deoxynucleotidase	NA	K7PKJ9	Enterobacteria_phage	98.9	3.7e-100
WP_000081278.1|940689_941514_-	YfdQ family protein	NA	K7PJQ6	Enterobacteria_phage	99.3	7.8e-150
WP_000135673.1|941579_941942_-	hypothetical protein	NA	Q8SBF8	Shigella_phage	99.2	1.9e-60
WP_001393497.1|942664_943159_+	PerC family transcriptional regulator	NA	A0A0P0ZCF0	Stx2-converting_phage	98.1	1.2e-86
WP_000066913.1|943158_943434_+	phage N-6-adenine-methyltransferase	NA	Q8SBE9	Shigella_phage	100.0	2.6e-49
WP_011443597.1|943483_944002_+	hypothetical protein	NA	M1FN94	Enterobacteria_phage	68.8	4.6e-39
WP_001106835.1|944028_944469_+|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	70.1	9.5e-54
WP_047792215.1|944767_945049_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000703651.1|946412_947333_-	glycosyltransferase family 2 protein	NA	M1FQW5	Enterobacteria_phage	89.9	4.2e-160
WP_000915541.1|947329_947692_-	GtrA family protein	NA	U5P0S6	Shigella_phage	88.3	1.0e-53
WP_000958671.1|947844_949002_-|integrase	prophage integrase IntS	integrase	A5VW56	Enterobacteria_phage	100.0	5.7e-223
WP_000368140.1|949313_950246_-	formate/nitrite transporter family protein	NA	E7DYY8	Enterobacteria_phage	99.0	2.5e-165
952256:952272	attR	GGTTGTCGATACCAATA	NA	NA	NA	NA
>prophage 2
NZ_CP013253	Escherichia coli strain CQSW20 chromosome, complete genome	4579074	1766862	1786073	4579074	lysis,tail	Enterobacteria_phage(40.91%)	35	NA	NA
WP_000379575.1|1766862_1767018_-	DUF1391 family protein	NA	M4QQ57	Salicola_phage	53.2	3.0e-07
WP_000448564.1|1767184_1767592_-	DNA-binding transcriptional dual regulator DicA	NA	K7PM82	Enterobacteria_phage	54.7	4.4e-13
WP_000920568.1|1767675_1767906_+	dicB transcriptional regulator DicC	NA	NA	NA	NA	NA
WP_011443592.1|1768202_1768352_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001301033.1|1768788_1769121_-	protein FlxA	NA	NA	NA	NA	NA
WP_001326990.1|1769323_1769629_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000534858.1|1769653_1769893_+	type II toxin-antitoxin system antitoxin RelB	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	54.4	1.6e-18
WP_000323025.1|1769892_1770180_+	type II toxin-antitoxin system mRNA interferase RelE	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	66.0	1.4e-29
WP_000813254.1|1770251_1770407_+	type I toxin-antitoxin system toxin HokD	NA	A0A0U2QV81	Escherichia_phage	96.1	1.5e-17
WP_000980994.1|1770623_1770875_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012304870.1|1770941_1771220_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001265198.1|1771221_1772271_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	57.3	1.3e-112
WP_001047135.1|1772284_1773037_+	antitermination protein	NA	A0A192Y5X6	Salmonella_phage	92.8	7.1e-134
WP_120795389.1|1773314_1773404_-	Qin prophage; protein YnfS	NA	NA	NA	NA	NA
WP_000087756.1|1773458_1773671_-	cold shock-like protein CspF	NA	NA	NA	NA	NA
WP_000066484.1|1773971_1774187_+	cold shock-like protein CspB	NA	A0A1W6JNX5	Morganella_phage	76.5	3.4e-25
WP_000839590.1|1774940_1775156_+|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	94.4	1.1e-31
WP_000189916.1|1775160_1775472_+	YdfR family protein	NA	K7PGU6	Enterobacteria_phage	64.6	2.0e-26
WP_001092971.1|1775468_1776002_+	lysozyme	NA	K7PLY1	Enterobacteria_phage	93.2	6.4e-97
WP_001071769.1|1775998_1776496_+	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	29.5	2.9e-06
WP_000066495.1|1776858_1777071_+	cold shock protein CspI	NA	A0A1W6JNX5	Morganella_phage	74.3	1.2e-22
WP_071524604.1|1777081_1777270_+	cold-shock protein	NA	NA	NA	NA	NA
WP_120795388.1|1777272_1777338_+	Qin prophage; protein YnfR	NA	NA	NA	NA	NA
WP_001309517.1|1777416_1777572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001019606.1|1777743_1777917_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA	NA
WP_000373090.1|1778068_1778479_-	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	79.4	2.5e-56
WP_001368374.1|1778536_1778770_-	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	84.1	2.5e-21
WP_000453612.1|1779158_1779728_+	DNA-packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	98.3	1.5e-91
WP_001027733.1|1779678_1780641_+|tail	tail fiber protein	tail	K7PHC9	Enterobacteria_phage	70.9	4.1e-41
WP_001698950.1|1780640_1781216_+|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	94.8	2.5e-102
WP_000086527.1|1781313_1781904_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	1.6e-24
WP_000836770.1|1782220_1782454_-	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	87.0	5.4e-32
WP_120795384.1|1782522_1782636_-	Rac prophage; protein YnaM	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_000347482.1|1783240_1784524_+	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_000527743.1|1784612_1786073_+	mannitol dehydrogenase family protein	NA	H8ZJP8	Ostreococcus_tauri_virus	29.6	4.3e-42
>prophage 3
NZ_CP013253	Escherichia coli strain CQSW20 chromosome, complete genome	4579074	1944831	2008775	4579074	tail,transposase,integrase,tRNA,lysis	Escherichia_phage(36.67%)	58	1987725:1987743	2015747:2015765
WP_001254932.1|1944831_1945983_-|transposase	IS30-like element IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.6	2.0e-42
WP_088895425.1|1946191_1947419_+|transposase	IS3-like element IS2 family transposase	transposase	Q9ZXG3	Shigella_phage	99.3	1.3e-177
WP_010723099.1|1950109_1950175_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001123464.1|1950278_1950869_-	phenylacetic acid degradation protein PaaY	NA	NA	NA	NA	NA
WP_000039887.1|1950850_1951801_-	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_000632280.1|1951901_1953215_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_001206197.1|1953241_1954447_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_000018413.1|1954446_1954869_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_046613373.1|1954858_1956286_-	3-hydroxyacyl-CoA dehydrogenase PaaC	NA	NA	NA	NA	NA
WP_000969784.1|1956287_1957076_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_001292353.1|1957075_1957843_-	2,3-dehydroadipyl-CoA hydratase	NA	NA	NA	NA	NA
WP_000206388.1|1957839_1958910_-	phenylacetate-CoA oxygenase/reductase subunit PaaK	NA	NA	NA	NA	NA
WP_001189201.1|1958917_1959415_-	phenylacetate degradation protein PaaD	NA	NA	NA	NA	NA
WP_001072837.1|1959429_1960176_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_000073393.1|1960184_1960472_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_001112359.1|1960483_1961347_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_001186469.1|1961697_1963743_+	phenylacetic acid degradation bifunctional protein PaaZ	NA	NA	NA	NA	NA
WP_000535469.1|1963990_1966264_+	primary-amine oxidase	NA	NA	NA	NA	NA
WP_000138615.1|1966321_1967821_-	phenylacetaldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_001067514.1|1968056_1968962_+	transcriptional regulator FeaR	NA	NA	NA	NA	NA
WP_001300734.1|1969133_1969460_-	YdbL family protein	NA	NA	NA	NA	NA
WP_000698145.1|1969467_1969653_-	YnbE family lipoprotein	NA	NA	NA	NA	NA
WP_000900941.1|1969649_1972289_-	YdbH family protein	NA	NA	NA	NA	NA
WP_000762236.1|1972496_1973486_+	D-lactate dehydrogenase	NA	M1I4S0	Paramecium_bursaria_Chlorella_virus	44.0	1.5e-70
WP_001298828.1|1973596_1974019_+	heat shock protein HslJ	NA	NA	NA	NA	NA
WP_001295715.1|1974015_1974282_-	DUF333 domain-containing protein	NA	NA	NA	NA	NA
WP_000628244.1|1974554_1978079_+	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA	NA
WP_000837921.1|1978446_1979580_+	porin OmpN	NA	Q1MVN1	Enterobacteria_phage	58.5	1.1e-117
WP_001300461.1|1979720_1980155_+	universal stress protein UspF	NA	A0A1W6JNV4	Morganella_phage	52.8	1.8e-28
WP_120795384.1|1980933_1981047_+	Rac prophage; protein YnaM	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_000836770.1|1981115_1981349_+	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	87.0	5.4e-32
WP_000086527.1|1981665_1982256_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	1.6e-24
WP_001698950.1|1982353_1982929_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	94.8	2.5e-102
WP_071885698.1|1982928_1986291_-	short-chain fatty acid transporter	NA	X2KTY7	Enterobacteria_phage	36.4	8.1e-12
WP_046613426.1|1986613_1987594_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	98.8	4.4e-184
1987725:1987743	attL	GCTTATTCGCACCTTCCCT	NA	NA	NA	NA
WP_000091628.1|1989359_1989719_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001350510.1|1989699_1989963_-	ParB N-terminal domain-containing protein	NA	A0A0R6PD10	Moraxella_phage	56.1	6.3e-21
WP_001097895.1|1990100_1991558_-	Trk system potassium uptake protein TrkG	NA	NA	NA	NA	NA
WP_001228696.1|1991754_1991940_-|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	98.2	2.8e-15
WP_000450663.1|1992027_1992588_-	DUF1627 domain-containing protein	NA	A0A0U2SAW4	Escherichia_phage	88.1	1.9e-67
WP_000788970.1|1992610_1993357_-	ATP-binding protein	NA	V5UQI5	Shigella_phage	78.9	3.8e-111
WP_000693797.1|1994232_1994655_-	phage protein	NA	A0A0U2RXZ9	Escherichia_phage	95.0	1.5e-69
WP_000712069.1|1994677_1994974_-	toxin YdaS	NA	A0A0R6PH31	Moraxella_phage	44.9	9.6e-10
WP_000948459.1|1995097_1995574_+	DNA-binding transcriptional repressor RacR	NA	A0A2D1GNH0	Pseudomonas_phage	53.4	2.2e-11
WP_001169151.1|1996027_1996183_+	YdaF family protein	NA	M4QQ57	Salicola_phage	55.3	6.1e-08
WP_046613436.1|1996179_1996668_-	superinfection exclusion protein B	NA	NA	NA	NA	NA
WP_001352098.1|1997329_1997500_+	conserved protein, Rac prophage	NA	A0A0U2SHB5	Escherichia_phage	71.4	3.6e-17
WP_000632297.1|1997574_1997850_+	protein RacC	NA	A0A0U2QW85	Escherichia_phage	96.7	1.4e-42
WP_000105143.1|1997951_2000552_+	exodeoxyribonuclease VIII	NA	A0A0U2I1R6	Escherichia_phage	63.5	5.1e-248
WP_000166319.1|2000544_2001354_+	recombination protein RecT	NA	A0A1P8DTF2	Proteus_phage	71.5	8.8e-106
WP_001317028.1|2001410_2001605_+	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	NA	A0A0U2QQP4	Escherichia_phage	96.9	5.8e-32
WP_000276809.1|2001597_2001807_+	double-strand break reduction protein RcbA	NA	A0A0U2QL97	Escherichia_phage	98.4	6.1e-27
WP_000079604.1|2001885_2002101_+	excisionase XisR	NA	A0A0U2RY08	Escherichia_phage	100.0	1.8e-37
WP_000040852.1|2002102_2003338_+|integrase	site-specific integrase	integrase	A0A0U2JGI6	Escherichia_phage	98.8	5.5e-240
WP_001157406.1|2003389_2004325_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	98.8	5.9e-146
WP_000123737.1|2004453_2005827_-	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.1	6.6e-53
WP_000387388.1|2006304_2007288_-	zinc transporter ZntB	NA	NA	NA	NA	NA
WP_000628058.1|2007542_2008775_+	diguanylate cyclase DgcM	NA	A0A127AWB9	Bacillus_phage	39.5	3.1e-17
2015747:2015765	attR	AGGGAAGGTGCGAATAAGC	NA	NA	NA	NA
>prophage 4
NZ_CP013253	Escherichia coli strain CQSW20 chromosome, complete genome	4579074	2086150	2154130	4579074	portal,tail,terminase,transposase,protease,head,integrase,lysis	Enterobacteria_phage(90.7%)	70	2105941:2106000	2154317:2155338
WP_000422045.1|2086150_2087200_-|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	31.5	1.3e-21
WP_000559286.1|2087419_2088178_+	YciK family oxidoreductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	23.9	4.4e-06
WP_001278906.1|2088174_2088765_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_001291217.1|2088804_2089680_-	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA	NA
WP_001326916.1|2089890_2091786_-	DUF2207 domain-containing protein	NA	NA	NA	NA	NA
WP_001295575.1|2091813_2092434_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_001285661.1|2092430_2093312_-	5'-3' exoribonuclease	NA	NA	NA	NA	NA
WP_001700591.1|2093449_2093494_+	trp operon leader peptide	NA	NA	NA	NA	NA
WP_000209520.1|2098112_2099306_+	tryptophan synthase subunit beta	NA	NA	NA	NA	NA
WP_000443067.1|2099305_2100112_+	tryptophan synthase subunit alpha	NA	NA	NA	NA	NA
WP_000807651.1|2100492_2100672_+	general stress protein	NA	NA	NA	NA	NA
WP_001056490.1|2100757_2101258_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_001079505.1|2101303_2101810_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_000737226.1|2101869_2102508_-	outer membrane protein OmpW	NA	NA	NA	NA	NA
WP_000028545.1|2102864_2103608_+	UPF0259 family protein	NA	NA	NA	NA	NA
WP_000808667.1|2103637_2104177_+	septation protein A	NA	NA	NA	NA	NA
WP_000108160.1|2104281_2104680_+	acyl-CoA thioester hydrolase YciA	NA	NA	NA	NA	NA
WP_001360141.1|2104719_2105439_-	TonB system transport protein TonB	NA	NA	NA	NA	NA
WP_000967595.1|2105662_2105959_+	YciI family protein	NA	NA	NA	NA	NA
2105941:2106000	attL	ATTTAAGAAAGTGTTCTGAATAGAGATTCAATATTTAAGGGCACGGTTTTTGCAACCGTG	NA	NA	NA	NA
WP_001143750.1|2106993_2110002_-|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	64.4	0.0e+00
WP_001235704.1|2110165_2110717_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	81.8	1.7e-76
WP_000422420.1|2110732_2112829_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000121907.1|2113175_2114042_-	2-hydroxy-6-oxonona-2,4-dienedioate hydrolase	NA	NA	NA	NA	NA
WP_000543457.1|2114059_2115004_-	3-carboxyethylcatechol 2,3-dioxygenase	NA	NA	NA	NA	NA
WP_001310587.1|2116745_2117693_+	DNA-binding transcriptional activator MhpR	NA	NA	NA	NA	NA
WP_000805902.1|2117769_2118852_+	DNA-binding transcriptional repressor LacI	NA	C6ZCU4	Enterobacteria_phage	100.0	7.5e-193
WP_000177853.1|2118974_2121956_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	100.0	0.0e+00
WP_000291549.1|2122007_2123261_+	lactose permease	NA	NA	NA	NA	NA
WP_001335915.1|2123326_2123938_+	galactoside O-acetyltransferase	NA	NA	NA	NA	NA
WP_001301263.1|2124040_2125222_-	cyanate transporter CynX	NA	NA	NA	NA	NA
WP_000118199.1|2125227_2126655_-	cyanase	NA	K7PGW9	Enterobacteria_phage	99.7	2.3e-181
WP_001018610.1|2126722_2127055_-|head	head decoration protein	head	E4WL24	Enterobacteria_phage	100.0	9.0e-57
WP_000929806.1|2127064_2128408_-	S49 family peptidase	NA	E4WL22	Enterobacteria_phage	100.0	1.3e-215
WP_000701345.1|2128388_2129981_-|portal	phage portal protein	portal	E4WL21	Enterobacteria_phage	100.0	1.3e-310
WP_000235412.1|2129977_2130184_-|head,tail	head-tail joining protein	head,tail	E4WL20	Enterobacteria_phage	100.0	5.8e-30
WP_001027236.1|2130183_2132106_-|terminase	phage terminase large subunit family protein	terminase	E4WL19	Enterobacteria_phage	100.0	0.0e+00
WP_000453624.1|2132080_2132626_-|terminase	terminase small subunit	terminase	E4WL18	Enterobacteria_phage	100.0	1.2e-95
WP_000509882.1|2132873_2133602_-	hypothetical protein	NA	M9NZE9	Enterobacteria_phage	100.0	8.7e-121
WP_001446081.1|2133992_2134589_+	hypothetical protein	NA	M9NZJ1	Enterobacteria_phage	100.0	9.7e-110
WP_012305470.1|2135376_2135835_-|lysis	lysis protein	lysis	M9NYX9	Enterobacteria_phage	100.0	2.2e-77
WP_001070143.1|2135831_2136326_-	lysozyme	NA	M9P0E5	Enterobacteria_phage	100.0	1.3e-91
WP_000286101.1|2136303_2136528_-	hypothetical protein	NA	M9NZI9	Enterobacteria_phage	100.0	1.9e-34
WP_001047620.1|2137006_2137816_-	antitermination protein	NA	M9NZB0	Enterobacteria_phage	100.0	2.3e-154
WP_085903671.1|2137815_2137932_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048813386.1|2137928_2138135_-	hypothetical protein	NA	M9NZE6	Enterobacteria_phage	100.0	2.4e-36
WP_001231139.1|2138131_2138773_-	protein ninG	NA	M9NYX8	Enterobacteria_phage	100.0	2.4e-114
WP_000063208.1|2138765_2139434_-	serine/threonine protein phosphatase	NA	M9P0E4	Enterobacteria_phage	100.0	2.3e-131
WP_000106777.1|2139430_2139601_-	NinE family protein	NA	K7P7K0	Enterobacteria_phage	100.0	1.1e-23
WP_000586532.1|2139600_2140056_-	hypothetical protein	NA	K7P7B8	Enterobacteria_phage	100.0	5.7e-86
WP_000838083.1|2141059_2141749_-	hypothetical protein	NA	M9NYX7	Enterobacteria_phage	100.0	8.8e-131
WP_000072106.1|2141745_2142654_-	replication protein	NA	K7PGZ0	Enterobacteria_phage	100.0	1.2e-159
WP_000555791.1|2142739_2143282_-	hypothetical protein	NA	M9NZI6	Enterobacteria_phage	100.0	1.6e-95
WP_000608751.1|2143312_2143534_-	helix-turn-helix domain-containing protein	NA	M9NZA8	Enterobacteria_phage	100.0	3.5e-33
WP_012305467.1|2143651_2144362_+	helix-turn-helix transcriptional regulator	NA	M9NZE3	Enterobacteria_phage	100.0	1.8e-134
WP_000432054.1|2144498_2145365_+	hypothetical protein	NA	M9NYX6	Enterobacteria_phage	100.0	3.5e-153
WP_000362427.1|2145395_2145605_-	hypothetical protein	NA	G8C7T7	Escherichia_phage	87.5	7.0e-23
WP_032180615.1|2146165_2146459_+	hypothetical protein	NA	M9P0E2	Enterobacteria_phage	99.0	2.0e-47
WP_001281305.1|2146614_2146824_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000218995.1|2146825_2146984_+	hypothetical protein	NA	M9NZI5	Enterobacteria_phage	100.0	6.9e-23
WP_000607102.1|2146980_2147190_+	cell division protein FtsZ	NA	M9NZE2	Enterobacteria_phage	100.0	4.7e-35
WP_000448252.1|2147200_2148037_+	zf-TFIIB domain-containing protein	NA	M9NYX5	Enterobacteria_phage	100.0	6.2e-155
WP_000005775.1|2148141_2149110_+	hypothetical protein	NA	M9P0E1	Enterobacteria_phage	100.0	1.8e-97
WP_000995354.1|2149117_2149399_+	host nuclease inhibitor GamL	NA	M9NZI3	Enterobacteria_phage	100.0	1.3e-48
WP_000059964.1|2149408_2150326_+	recombinase RecT	NA	M9NZA6	Enterobacteria_phage	100.0	1.1e-171
WP_000187057.1|2150322_2151003_+	YqaJ viral recombinase family protein	NA	M9NZE1	Enterobacteria_phage	100.0	1.3e-131
WP_000831730.1|2150999_2151428_+	hypothetical protein	NA	M9NYX4	Enterobacteria_phage	100.0	9.5e-75
WP_000148438.1|2151424_2151577_+	DUF1317 family protein	NA	NA	NA	NA	NA
WP_024168593.1|2152461_2152701_+	DUF4060 family protein	NA	M9P0E0	Enterobacteria_phage	100.0	1.1e-37
WP_000340953.1|2152742_2152940_+	hypothetical protein	NA	K7PM28	Enterobacteria_phage	100.0	8.3e-34
WP_000627155.1|2152936_2154130_-|integrase	site-specific integrase	integrase	K7PGY1	Enterobacteria_phage	100.0	1.3e-235
2154317:2155338	attR	ATTTAAGAAAGTGTTCTGAATAGAGATTCAATATTTAAGGGCACGGTTTTTGCAACCGTGTTCTTGTTTGGCCTTTCCTTATAGCCGGTCAGTGCATTCACCACCACAAGCAGATAATAACTTTATCTGTATTTCTTTATATGATGTGAGCATATTCAGGAAAAATGACCTTTCCTGAGGTACAGTTGCTCGCTCAAATCCTTTGATTACTGCGGATAAAGTCATCTACTATTGTTTAACACATTCACGCGCTGCATGTATGTTCAGAAAATGTGCACGCTAAGATAATTAAACAAAATTGTGGTTACAGAGGTATCAGTGAGTCACTGGGCTACATTCAAACAAACAGCAACAAATTTATGGGTGACCCTTCGGCACGACATTCTCGCGCTGGCCGTCTTTTTAAATGGATTGCTTATTTTTAAAACAATCTATGGTATGTCGGTCAATTTGCTTGATATTTTCCATATCAAAGCATTTTCAGAGTTGGATCTCTCCTTGCTGGCAAACGCCCCACTCTTTATGCTCGGCGTCTTTCTTGTCCTGAACTCCATTGGCTTACTGTTCCGGGCAAAGCTCGCATGGGCAATCAGTATCATTTTGTTGTTGATAGCGCTAATTTACACCCTGCATTTTTATCCCTGGCTGAAATTTAGTATTGGATTTTGCATTTTTACGCTGGTGTTTTTGCTGATACTGCGCAAAGACTTCTCCCACAGTAGCGCCGCAGCCGGGACAATTTTTGCATTTATTAGTTTCACGACATTACTGTTTTACTCAACCTACGGTGCGCTTTATTTAAGCGAAGGTTTTAATCCGCGAATAGAAAGTTTGATGACCGCGTTCTATTTTTCGATAGAAACCATGTCAACCGTCGGCTATGGCGATATTGTCCCTGTTTCTGAATCAGCACGATTGTTCACTATTTCGGTCATTATTTCCGGCATTACCGTTTTTGCCACATCTATGACCTCAATTTTTGGTCCGCTTATCCGCGGGGGATTCAACAAACTTGTAAAAGG	NA	NA	NA	NA
>prophage 5
NZ_CP013253	Escherichia coli strain CQSW20 chromosome, complete genome	4579074	2249888	2262170	4579074	plate,portal,tail	Escherichia_phage(27.78%)	20	NA	NA
WP_000332303.1|2249888_2250620_+	DNA-binding transcriptional repressor BluR	NA	Q9EYF2	Enterobacteria_phage	50.5	2.7e-53
WP_000373101.1|2250840_2251245_+	DUF1398 domain-containing protein	NA	NA	NA	NA	NA
WP_032082692.1|2251297_2251408_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001295666.1|2251943_2252267_+	anti-adapter protein IraM	NA	Q8HAJ1	Enterobacteria_phage	65.4	3.0e-41
WP_000943927.1|2252369_2252534_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	96.3	4.2e-23
WP_000905001.1|2253706_2254261_-	site-specific DNA recombinase	NA	A0A1S6L009	Salmonella_phage	88.3	2.8e-87
WP_024184299.1|2254332_2254827_+|tail	tail fiber protein	tail	A0A0F7LCR3	Escherichia_phage	57.0	3.7e-46
WP_000548498.1|2254826_2255429_+|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	83.5	9.2e-92
WP_010723096.1|2255400_2255814_-|tail	tail assembly chaperone	tail	A0A0F7LDZ0	Escherichia_phage	53.6	7.1e-27
WP_000554703.1|2255815_2256445_-	hypothetical protein	NA	M1FN94	Enterobacteria_phage	95.4	1.1e-52
WP_000383574.1|2256448_2257033_-	YmfQ family protein	NA	O22003	Shigella_phage	98.5	2.0e-112
WP_001350503.1|2257023_2257815_-|plate	baseplate J/gp47 family protein	plate	M1FQW3	Enterobacteria_phage	97.3	4.7e-144
WP_001350502.1|2257741_2258215_-|portal	phage portal protein	portal	A0A1B5FP95	Escherichia_phage	100.0	3.6e-75
WP_000605606.1|2258214_2258397_-	hypothetical protein	NA	S5FXQ9	Shigella_phage	100.0	1.7e-25
WP_000104929.1|2258408_2259776_-	GntR family transcriptional regulator	NA	A0A1C9IIA1	Salmonella_phage	99.2	5.1e-223
WP_001250269.1|2259765_2259945_-	DUF4222 domain-containing protein	NA	S5M7S5	Escherichia_phage	68.5	7.8e-15
WP_000515837.1|2260120_2260678_-	protein YmfL	NA	S5FXP0	Shigella_phage	95.7	7.4e-96
WP_000649480.1|2260721_2260922_-	transcriptional regulator	NA	U5P445	Shigella_phage	98.5	1.9e-30
WP_000848748.1|2261012_2261687_+	LexA family transcriptional repressor	NA	U5P0T5	Shigella_phage	100.0	1.2e-132
WP_001005353.1|2261861_2262170_+	hypothetical protein	NA	I6PDF6	Cronobacter_phage	80.0	3.8e-09
>prophage 6
NZ_CP013253	Escherichia coli strain CQSW20 chromosome, complete genome	4579074	2854923	2887962	4579074	lysis,terminase,transposase,protease	Enterobacteria_phage(53.85%)	31	NA	NA
WP_001300563.1|2854923_2856036_-|transposase	IS4-like element IS421 family transposase	transposase	NA	NA	NA	NA
WP_000956455.1|2856112_2856265_-	type I toxin-antitoxin system toxin HokE	NA	NA	NA	NA	NA
WP_001130654.1|2856717_2857836_+	glutamate--cysteine ligase	NA	NA	NA	NA	NA
WP_000682509.1|2857901_2858150_+	DUF1158 domain-containing protein	NA	NA	NA	NA	NA
WP_000360951.1|2858214_2858583_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_000351487.1|2858676_2859330_+	oxygen-insensitive NAD(P)H nitroreductase	NA	NA	NA	NA	NA
WP_001153148.1|2859437_2860685_+	mechanosensitive ion channel YbdG	NA	NA	NA	NA	NA
WP_000786319.1|2860765_2862142_-	phenylalanine transporter	NA	NA	NA	NA	NA
WP_000573945.1|2862243_2865387_-	Cu(+)/Ag(+) efflux RND transporter permease subunit CusA	NA	S5VTK5	Leptospira_phage	22.1	2.2e-59
WP_000717157.1|2865398_2866622_-	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB	NA	NA	NA	NA	NA
WP_000709870.1|2866637_2866970_-	Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF	NA	NA	NA	NA	NA
WP_000074234.1|2867127_2868501_-	Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC	NA	NA	NA	NA	NA
WP_000770953.1|2868657_2869341_+	copper response regulator transcription factor CusR	NA	W8CYM9	Bacillus_phage	35.1	1.0e-30
WP_000253839.1|2869330_2870773_+	Cu(+)/Ag(+) sensor histidine kinase CusS	NA	A0A1V0SGX0	Hokovirus	26.2	3.0e-11
WP_000383932.1|2870922_2873160_+	phage adsorption protein NrfB	NA	NA	NA	NA	NA
WP_000662357.1|2873146_2876119_+	bacteriophage adsorption protein NfrA	NA	NA	NA	NA	NA
WP_001224604.1|2876119_2877010_+	DUF4434 family protein	NA	NA	NA	NA	NA
WP_001177471.1|2877192_2877954_+	DNA-binding transcriptional regulator EnvY	NA	NA	NA	NA	NA
WP_001201845.1|2878467_2879421_+|protease	omptin family outer membrane protease OmpT	protease	NA	NA	NA	NA
WP_000386784.1|2879670_2880420_-	DNA-binding transcriptional activator AppY	NA	NA	NA	NA	NA
WP_026089880.1|2881322_2881949_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_001027248.1|2882003_2882747_-|terminase	phage terminase large subunit family protein	terminase	K7PMH7	Enterobacteria_phage	93.1	4.1e-73
WP_000453566.1|2882721_2883267_-	DNA-packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	98.3	4.0e-94
WP_001421937.1|2883655_2883850_+	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	100.0	8.7e-28
WP_001031427.1|2884014_2884221_-	hypothetical protein	NA	A0A0K2FJ18	Enterobacteria_phage	100.0	5.8e-30
WP_000079503.1|2884506_2884917_+	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	98.5	1.2e-71
WP_000738500.1|2885207_2885501_+	serum resistance lipoprotein Bor	NA	A0A2R2X2B2	Escherichia_phage	97.9	5.7e-47
WP_001228697.1|2885591_2885774_-|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	78.3	1.4e-16
WP_001135281.1|2885990_2886488_-	lysozyme RrrD	NA	M1FJA0	Enterobacteria_phage	98.2	1.1e-90
WP_000839596.1|2886487_2886703_-|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	100.0	9.0e-34
WP_010723085.1|2886945_2887962_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	100.0	4.4e-187
