The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP009828	Staphylococcus aureus strain MS4 chromosome, complete genome	2709797	752920	760740	2709797		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|752920_753976_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|753975_754662_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|754636_755110_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093553.1|755451_755892_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_058142967.1|756171_756756_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062976.1|756854_757568_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|757571_757991_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|757992_758661_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604508.1|759011_759605_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	44.0	6.8e-39
WP_001217800.1|759588_760740_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	6.0e-23
>prophage 2
NZ_CP009828	Staphylococcus aureus strain MS4 chromosome, complete genome	2709797	772721	787231	2709797		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000663039.1|772721_773780_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.4	1.4e-21
WP_000197262.1|773938_774481_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429011.1|775088_776006_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	6.2e-07
WP_031760357.1|776098_776200_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|776277_777783_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|778122_778623_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068497.1|778642_779509_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|780309_780708_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855509.1|780670_782776_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.6	0.0e+00
WP_000562498.1|782893_783865_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|784364_784520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876317.1|784558_785530_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.6	3.6e-138
WP_001245572.1|785516_786473_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616873.1|786469_787231_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 3
NZ_CP009828	Staphylococcus aureus strain MS4 chromosome, complete genome	2709797	867870	889371	2709797	integrase,coat,terminase	Staphylococcus_phage(77.78%)	33	866177:866198	886839:886860
866177:866198	attL	AGGGAGTGGGACAGAAATGATA	NA	NA	NA	NA
WP_000571213.1|867870_868896_+	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.8	9.4e-28
WP_000520233.1|868888_869584_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000732334.1|869601_870423_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000266157.1|870565_871786_-|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	47.5	6.4e-100
WP_000733774.1|871873_872602_-	staphylococcal enterotoxin type K	NA	A0EX09	Staphylococcus_phage	31.8	5.5e-22
WP_058142969.1|872625_873354_-	staphylococcal enterotoxin type Q	NA	A0EX09	Staphylococcus_phage	35.4	1.8e-28
WP_001228759.1|873423_873855_-	hypothetical protein	NA	Q4ZCB6	Staphylococcus_virus	56.0	5.1e-36
WP_000281657.1|873871_874330_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0H4J322	Staphylococcus_phage	83.0	5.1e-66
WP_001260004.1|874341_874674_-	helix-turn-helix transcriptional regulator	NA	A0A1J0MFC1	Staphylococcus_phage	74.5	1.6e-37
WP_000243851.1|874866_875130_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J9X2	uncultured_Caudovirales_phage	94.8	3.1e-36
WP_000091731.1|875122_875395_+	winged helix-turn-helix domain-containing protein	NA	Q4ZE77	Staphylococcus_phage	90.0	9.7e-41
WP_000784875.1|875406_875553_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001058486.1|875545_875755_+	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	94.2	1.7e-29
WP_001103942.1|875757_876078_+	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	51.9	1.3e-20
WP_001002732.1|876141_877011_+	hypothetical protein	NA	A0A1W6JQL5	Staphylococcus_phage	92.7	3.4e-156
WP_000390454.1|877027_878497_+	hypothetical protein	NA	A0A1W6JQD6	Staphylococcus_phage	99.0	2.9e-288
WP_001039168.1|878782_879145_+	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	99.2	8.9e-66
WP_000998181.1|879146_879431_+	hypothetical protein	NA	A0A1W6JQE4	Staphylococcus_phage	95.7	1.9e-47
WP_001019764.1|879427_880069_+	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	91.5	1.5e-108
WP_001190615.1|880585_880927_+	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	99.1	1.4e-57
WP_000846285.1|880938_881517_+	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.4	1.4e-28
WP_000448773.1|881534_881753_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000771368.1|881803_882331_+|coat	spore coat protein	coat	A0A1W6JQH7	Staphylococcus_phage	97.1	3.5e-87
WP_045181470.1|882462_882675_+	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	98.6	1.1e-31
WP_001293067.1|882671_883241_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	97.9	1.0e-100
WP_000278085.1|883548_884349_+	staphylococcal enterotoxin type B	NA	A0A097PAT7	Streptococcus_pyogenes_phage	49.4	1.0e-53
WP_001035631.1|884426_884984_-	DUF4888 domain-containing protein	NA	A0A1W6JQE5	Staphylococcus_phage	73.8	1.4e-70
WP_001795626.1|885357_885510_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	98.0	7.6e-19
WP_000139423.1|885580_885691_+	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_000382163.1|885677_885878_+	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
WP_000752917.1|887001_887196_+	CsbD family protein	NA	NA	NA	NA	NA
886839:886860	attR	TATCATTTCTGTCCCACTCCCT	NA	NA	NA	NA
WP_001183851.1|887429_888281_-	DUF368 domain-containing protein	NA	NA	NA	NA	NA
WP_000168845.1|888609_889371_+	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
>prophage 4
NZ_CP009828	Staphylococcus aureus strain MS4 chromosome, complete genome	2709797	977643	1023369	2709797	transposase,tRNA,bacteriocin,protease	Streptococcus_phage(33.33%)	38	NA	NA
WP_000277723.1|977643_979290_+|transposase	IS1182-like element ISSau3 family transposase	transposase	A0ZS58	Staphylococcus_virus	99.1	1.6e-292
WP_000448937.1|979315_980305_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|980599_980995_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217728.1|981365_982085_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_058142972.1|982205_983192_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_000082725.1|983239_985048_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
WP_000896697.1|985507_986314_-	DsbA family protein	NA	NA	NA	NA	NA
WP_000214067.1|986336_986702_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000224622.1|986805_987399_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_001242107.1|987584_987932_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077683.1|987948_988584_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|988600_989410_+	NAD kinase	NA	NA	NA	NA	NA
WP_000669925.1|989406_990261_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000062407.1|990281_991667_+	magnesium transporter	NA	NA	NA	NA	NA
WP_000395162.1|991676_993521_+	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_000933195.1|993799_994570_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933105.1|994766_995852_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000570701.1|996193_997762_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_000889183.1|997904_998663_+	esterase family protein	NA	NA	NA	NA	NA
WP_001060547.1|998828_999554_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000600387.1|1001140_1001650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001824107.1|1001762_1002971_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258650.1|1002930_1004106_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_000340127.1|1004538_1006023_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_001798480.1|1006003_1006264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049958.1|1006263_1007826_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.0	3.2e-35
WP_000928413.1|1008127_1008931_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_078064575.1|1009146_1011471_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.1e-11
WP_000021872.1|1011487_1012846_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414178.1|1012984_1014496_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|1014984_1015554_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876826.1|1015763_1015982_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668820.1|1016062_1017049_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|1017247_1017424_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033867.1|1017438_1018041_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_057504515.1|1018437_1020084_+|transposase	IS1182-like element ISSau3 family transposase	transposase	A0A146ICT8	Staphylococcus_phage	99.6	9.7e-293
WP_029656376.1|1021094_1021361_+|bacteriocin	bacteriocin transporter	bacteriocin	NA	NA	NA	NA
WP_000870825.1|1021404_1023369_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
>prophage 5
NZ_CP009828	Staphylococcus aureus strain MS4 chromosome, complete genome	2709797	1055576	1064049	2709797		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861570.1|1055576_1056059_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	8.0e-22
WP_001010401.1|1056045_1057170_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174047.1|1057173_1057878_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	41.2	1.4e-46
WP_000848350.1|1057877_1058141_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666799.1|1058142_1058814_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032747.1|1058806_1060996_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.8e-140
WP_000483727.1|1060974_1062459_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.5	1.6e-44
WP_000030810.1|1062451_1063480_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
WP_000238670.1|1063482_1064049_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	3.6e-29
>prophage 6
NZ_CP009828	Staphylococcus aureus strain MS4 chromosome, complete genome	2709797	1322191	1329695	2709797	capsid	Staphylococcus_phage(87.5%)	14	NA	NA
WP_001659797.1|1322191_1322389_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	48.4	1.7e-10
WP_078065144.1|1323078_1323303_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	71.0	4.3e-18
WP_001002343.1|1323598_1323805_+	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	56.7	1.9e-12
WP_001788716.1|1324500_1324611_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000006110.1|1325039_1325225_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
WP_000477491.1|1325736_1325841_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000956747.1|1325967_1326219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_166517775.1|1326288_1326696_+|capsid	minor capsid protein	capsid	A0A1J0MFV1	Staphylococcus_phage	61.8	2.0e-42
WP_001813273.1|1326692_1326947_+	hypothetical protein	NA	A0A1J0MF61	Staphylococcus_phage	62.7	1.4e-25
WP_000780597.1|1326946_1327141_+	hypothetical protein	NA	A0A1J0MG79	Staphylococcus_phage	71.4	2.8e-18
WP_071665623.1|1327201_1327330_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000440735.1|1327296_1327575_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001217295.1|1328753_1328948_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064137920.1|1329026_1329695_+|capsid	minor capsid protein	capsid	Q4ZE35	Staphylococcus_virus	70.7	1.5e-29
>prophage 7
NZ_CP009828	Staphylococcus aureus strain MS4 chromosome, complete genome	2709797	1503993	1628857	2709797	protease,capsid,integrase,tRNA,head,portal,tail,holin	Staphylococcus_phage(90.51%)	184	1580992:1581051	1623164:1623275
WP_000858801.1|1503993_1505286_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.5e-54
WP_000525064.1|1505607_1508301_-	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.6	1.1e-46
WP_000049916.1|1508324_1509296_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000361537.1|1509282_1510485_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	5.4e-35
WP_000690024.1|1510489_1511632_-	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000839926.1|1511889_1512207_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_001827022.1|1512542_1513223_-	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000154692.1|1513294_1513882_-	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
WP_000005216.1|1513871_1514447_-	IDEAL domain-containing protein	NA	G3MAV7	Bacillus_virus	27.2	2.7e-08
WP_000389518.1|1514460_1515705_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000245912.1|1515711_1517010_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000776330.1|1517019_1518084_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_001269940.1|1518109_1519276_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.3	2.6e-34
WP_000789522.1|1519662_1519863_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000442477.1|1520072_1520522_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_078062714.1|1520613_1521558_-	heptaprenyl diphosphate synthase	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000774684.1|1521574_1522300_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_000450555.1|1522302_1522875_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_001043863.1|1523305_1523578_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000161742.1|1523748_1524747_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_000165530.1|1524763_1526074_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000133960.1|1526290_1527466_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_031844924.1|1527721_1527913_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031844926.1|1528029_1528134_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000644394.1|1528176_1528836_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_000681761.1|1528912_1529881_+	asparaginase	NA	NA	NA	NA	NA
WP_001174260.1|1529995_1530982_-	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_001824277.1|1531142_1531259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000069308.1|1531383_1532844_-	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_000902114.1|1532996_1534376_-	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.2e-56
WP_001163813.1|1534365_1535319_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001151997.1|1535426_1535675_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001186908.1|1535780_1536326_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_000476869.1|1536728_1537673_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000476889.1|1537730_1538636_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_061820357.1|1538726_1538978_-	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	96.7	2.0e-24
WP_024937002.1|1539160_1540144_-	Panton-Valentine bi-component leukocidin subunit F	NA	A0A2I6PEU3	Staphylococcus_phage	100.0	4.0e-185
WP_000239544.1|1540139_1541078_-	Panton-Valentine bi-component leukocidin subunit S	NA	A0A2I6PF61	Staphylococcus_phage	100.0	1.7e-180
WP_000909204.1|1541468_1542923_-	CHAP domain-containing protein	NA	A0A2I6PF47	Staphylococcus_phage	100.0	7.5e-289
WP_000339141.1|1542933_1543236_-|holin	phage holin	holin	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
WP_000340977.1|1543361_1543736_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_001040259.1|1543791_1544079_-	hypothetical protein	NA	G4KNR2	Staphylococcus_phage	100.0	9.9e-44
WP_001153681.1|1544125_1544278_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_000582126.1|1544267_1548053_-	hypothetical protein	NA	G4KNR1	Staphylococcus_phage	100.0	0.0e+00
WP_000567420.1|1548068_1549553_-|tail	phage tail protein	tail	G4KNR0	Staphylococcus_phage	100.0	1.6e-299
WP_000504558.1|1549552_1554094_-|tail	phage tail tape measure protein	tail	A0A2I6PE03	Staphylococcus_phage	100.0	0.0e+00
WP_001549167.1|1554150_1554288_-	hypothetical protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	3.4e-18
WP_001096355.1|1554338_1554689_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_071621395.1|1554738_1554963_-	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_000268740.1|1555004_1555649_-|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	100.0	6.5e-120
WP_000565498.1|1555649_1556057_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114226.1|1556053_1556458_-	hypothetical protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000755150.1|1556454_1556817_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000150936.1|1556800_1557085_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238236.1|1557074_1557359_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000154559.1|1557378_1558524_-|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000642728.1|1558547_1559285_-|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000025272.1|1559268_1560456_-|portal	phage portal protein	portal	G4KNQ1	Staphylococcus_phage	100.0	4.6e-220
WP_000402904.1|1562129_1562474_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988330.1|1562604_1562904_-	HNH endonuclease	NA	G4KNP8	Staphylococcus_phage	100.0	4.6e-52
WP_000590122.1|1563135_1563552_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000265043.1|1563579_1563780_-	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
WP_001005262.1|1563779_1564430_-	hypothetical protein	NA	D2JLD8	Staphylococcus_phage	100.0	8.9e-117
WP_000501856.1|1564588_1564753_-	transcriptional activator RinB	NA	A0A2I6PDY4	Staphylococcus_phage	100.0	3.9e-21
WP_001125015.1|1564740_1564941_-	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	100.0	1.8e-28
WP_000195782.1|1564915_1565104_-	DUF1381 domain-containing protein	NA	A0A2I6PDV0	Staphylococcus_phage	100.0	2.1e-26
WP_001282074.1|1565100_1565346_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
WP_001061834.1|1565382_1565889_-	hypothetical protein	NA	G4KNP5	Staphylococcus_phage	100.0	1.0e-91
WP_000889683.1|1565903_1566065_-	hypothetical protein	NA	A0A2I6PDW5	Staphylococcus_phage	100.0	2.4e-23
WP_000454994.1|1566065_1566347_-	hypothetical protein	NA	A0A2I6PDX3	Staphylococcus_phage	100.0	8.5e-48
WP_000028424.1|1566347_1566521_-	hypothetical protein	NA	A0A2H4PQJ2	Staphylococcus_phage	100.0	1.8e-24
WP_001065099.1|1566510_1566762_-	DUF1024 family protein	NA	G4KNP4	Staphylococcus_phage	100.0	6.4e-39
WP_000131388.1|1566776_1567019_-	hypothetical protein	NA	A0A2I6PDU1	Staphylococcus_phage	100.0	3.9e-41
WP_000029366.1|1567022_1567379_-	hypothetical protein	NA	G4KNP3	Staphylococcus_phage	100.0	1.1e-60
WP_001187236.1|1567379_1567565_-	DUF3113 family protein	NA	A0A068A236	Staphylococcus_phage	95.1	7.8e-26
WP_000049798.1|1567569_1567974_-	DUF1064 domain-containing protein	NA	G4KNP2	Staphylococcus_phage	100.0	1.6e-68
WP_001123669.1|1567983_1568205_-	DUF3269 family protein	NA	A0A2I6PDV8	Staphylococcus_phage	100.0	1.7e-35
WP_000256594.1|1568217_1568376_-	hypothetical protein	NA	A0A2I6PDX0	Staphylococcus_phage	98.1	4.5e-22
WP_000803062.1|1568369_1569149_-	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	100.0	3.8e-146
WP_000190254.1|1569158_1569929_-	hypothetical protein	NA	G4KNP0	Staphylococcus_phage	100.0	6.4e-122
WP_000414755.1|1569994_1570276_+	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_001081076.1|1570268_1570418_-	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	100.0	2.4e-17
WP_000057262.1|1570414_1571089_-	hypothetical protein	NA	G4KNN9	Staphylococcus_phage	100.0	8.6e-131
WP_001099007.1|1571100_1571544_-	single-stranded DNA-binding protein	NA	G4KNN8	Staphylococcus_phage	100.0	1.4e-76
WP_000840496.1|1571540_1572191_-	single-stranded DNA-binding protein	NA	A0A0F6N3I5	Staphylococcus_phage	100.0	1.1e-119
WP_001004336.1|1572191_1572728_-	hypothetical protein	NA	A0A0F6N4M6	Staphylococcus_phage	100.0	1.4e-80
WP_001556704.1|1572740_1573001_-	DUF1108 family protein	NA	G4KNN5	Staphylococcus_phage	100.0	2.0e-43
WP_000829610.1|1573005_1573323_-	hypothetical protein	NA	A0A2I6PEL3	Staphylococcus_phage	100.0	3.9e-33
WP_001285954.1|1573411_1573573_-	DUF1270 domain-containing protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
WP_001124198.1|1573584_1573848_-	helix-turn-helix domain-containing protein	NA	A0A2I6PEL8	Staphylococcus_phage	100.0	2.5e-46
WP_001037095.1|1573877_1574096_-	hypothetical protein	NA	A0A2I6PDV4	Staphylococcus_phage	100.0	5.0e-32
WP_001025595.1|1574092_1574419_-	hypothetical protein	NA	G4KNN2	Staphylococcus_phage	100.0	5.4e-54
WP_001662405.1|1574495_1574633_-	hypothetical protein	NA	A0ZS11	Staphylococcus_virus	97.8	3.7e-17
WP_000435343.1|1574652_1574913_-	hypothetical protein	NA	A0A2I6PDT7	Staphylococcus_phage	100.0	3.5e-40
WP_001148617.1|1574925_1575678_-	oxidoreductase	NA	G4KNN1	Staphylococcus_phage	100.0	1.1e-139
WP_000801108.1|1575738_1575966_+	hypothetical protein	NA	A7TWL9	Staphylococcus_phage	100.0	1.7e-38
WP_000502678.1|1575967_1576159_-	hypothetical protein	NA	A0A2I6PDT1	Staphylococcus_phage	100.0	9.5e-27
WP_000772137.1|1576215_1576425_+	hypothetical protein	NA	A0A2I6PDR8	Staphylococcus_phage	100.0	9.1e-31
WP_000939495.1|1576417_1576558_-	hypothetical protein	NA	A0A2I6PDT8	Staphylococcus_phage	100.0	1.9e-16
WP_000435346.1|1576572_1577016_-	hypothetical protein	NA	G4KNN0	Staphylococcus_phage	100.0	2.0e-75
WP_000548578.1|1577028_1577268_-	helix-turn-helix transcriptional regulator	NA	G4KNM9	Staphylococcus_phage	100.0	2.3e-38
WP_000094093.1|1577438_1578146_+	helix-turn-helix transcriptional regulator	NA	G4KNM8	Staphylococcus_phage	100.0	7.7e-130
WP_001049399.1|1578157_1578313_+	hypothetical protein	NA	A0A2I6PDR9	Staphylococcus_phage	100.0	6.3e-21
WP_001089804.1|1578299_1578485_+	hypothetical protein	NA	A0A2I6PDS4	Staphylococcus_phage	100.0	2.3e-25
WP_000705240.1|1578684_1578867_+	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_001013104.1|1578902_1579049_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000191466.1|1579045_1579660_-	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	100.0	6.7e-106
WP_000264751.1|1579785_1580991_+|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
1580992:1581051	attL	CTTAAATCTGCCCTTTTTTTGCCCTTATATTTTTTACAAGCTTTATAAAACGCTTGAGAA	NA	NA	NA	NA
WP_024937002.1|1581332_1582316_-	Panton-Valentine bi-component leukocidin subunit F	NA	A0A2I6PEU3	Staphylococcus_phage	100.0	4.0e-185
WP_000239544.1|1582311_1583250_-	Panton-Valentine bi-component leukocidin subunit S	NA	A0A2I6PF61	Staphylococcus_phage	100.0	1.7e-180
WP_000909204.1|1583640_1585095_-	CHAP domain-containing protein	NA	A0A2I6PF47	Staphylococcus_phage	100.0	7.5e-289
WP_000339141.1|1585105_1585408_-|holin	phage holin	holin	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
WP_000340977.1|1585533_1585908_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_001040259.1|1585963_1586251_-	hypothetical protein	NA	G4KNR2	Staphylococcus_phage	100.0	9.9e-44
WP_001153681.1|1586297_1586450_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_000582126.1|1586439_1590225_-	hypothetical protein	NA	G4KNR1	Staphylococcus_phage	100.0	0.0e+00
WP_000567420.1|1590240_1591725_-|tail	phage tail protein	tail	G4KNR0	Staphylococcus_phage	100.0	1.6e-299
WP_000504558.1|1591724_1596266_-|tail	phage tail tape measure protein	tail	A0A2I6PE03	Staphylococcus_phage	100.0	0.0e+00
WP_001549167.1|1596322_1596460_-	hypothetical protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	3.4e-18
WP_001096355.1|1596510_1596861_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_071621395.1|1596910_1597135_-	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_000268740.1|1597176_1597821_-|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	100.0	6.5e-120
WP_000565498.1|1597821_1598229_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114226.1|1598225_1598630_-	hypothetical protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000755150.1|1598626_1598989_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000150936.1|1598972_1599257_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238236.1|1599246_1599531_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000154559.1|1599550_1600696_-|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000642728.1|1600719_1601457_-|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000025272.1|1601440_1602628_-|portal	phage portal protein	portal	G4KNQ1	Staphylococcus_phage	100.0	4.6e-220
WP_000402904.1|1604301_1604646_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988330.1|1604776_1605076_-	HNH endonuclease	NA	G4KNP8	Staphylococcus_phage	100.0	4.6e-52
WP_000590122.1|1605307_1605724_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000265043.1|1605751_1605952_-	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
WP_001005262.1|1605951_1606602_-	hypothetical protein	NA	D2JLD8	Staphylococcus_phage	100.0	8.9e-117
WP_000501856.1|1606760_1606925_-	transcriptional activator RinB	NA	A0A2I6PDY4	Staphylococcus_phage	100.0	3.9e-21
WP_001125015.1|1606912_1607113_-	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	100.0	1.8e-28
WP_000195782.1|1607087_1607276_-	DUF1381 domain-containing protein	NA	A0A2I6PDV0	Staphylococcus_phage	100.0	2.1e-26
WP_001282074.1|1607272_1607518_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
WP_001061834.1|1607554_1608061_-	hypothetical protein	NA	G4KNP5	Staphylococcus_phage	100.0	1.0e-91
WP_000889683.1|1608075_1608237_-	hypothetical protein	NA	A0A2I6PDW5	Staphylococcus_phage	100.0	2.4e-23
WP_000454994.1|1608237_1608519_-	hypothetical protein	NA	A0A2I6PDX3	Staphylococcus_phage	100.0	8.5e-48
WP_000028424.1|1608519_1608693_-	hypothetical protein	NA	A0A2H4PQJ2	Staphylococcus_phage	100.0	1.8e-24
WP_001065099.1|1608682_1608934_-	DUF1024 family protein	NA	G4KNP4	Staphylococcus_phage	100.0	6.4e-39
WP_000131388.1|1608948_1609191_-	hypothetical protein	NA	A0A2I6PDU1	Staphylococcus_phage	100.0	3.9e-41
WP_000029366.1|1609194_1609551_-	hypothetical protein	NA	G4KNP3	Staphylococcus_phage	100.0	1.1e-60
WP_001187236.1|1609551_1609737_-	DUF3113 family protein	NA	A0A068A236	Staphylococcus_phage	95.1	7.8e-26
WP_000049798.1|1609741_1610146_-	DUF1064 domain-containing protein	NA	G4KNP2	Staphylococcus_phage	100.0	1.6e-68
WP_001123669.1|1610155_1610377_-	DUF3269 family protein	NA	A0A2I6PDV8	Staphylococcus_phage	100.0	1.7e-35
WP_000256594.1|1610389_1610548_-	hypothetical protein	NA	A0A2I6PDX0	Staphylococcus_phage	98.1	4.5e-22
WP_000803062.1|1610541_1611321_-	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	100.0	3.8e-146
WP_000190254.1|1611330_1612101_-	hypothetical protein	NA	G4KNP0	Staphylococcus_phage	100.0	6.4e-122
WP_000414755.1|1612166_1612448_+	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_001081076.1|1612440_1612590_-	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	100.0	2.4e-17
WP_000057262.1|1612586_1613261_-	hypothetical protein	NA	G4KNN9	Staphylococcus_phage	100.0	8.6e-131
WP_001099007.1|1613272_1613716_-	single-stranded DNA-binding protein	NA	G4KNN8	Staphylococcus_phage	100.0	1.4e-76
WP_000840496.1|1613712_1614363_-	single-stranded DNA-binding protein	NA	A0A0F6N3I5	Staphylococcus_phage	100.0	1.1e-119
WP_001004336.1|1614363_1614900_-	hypothetical protein	NA	A0A0F6N4M6	Staphylococcus_phage	100.0	1.4e-80
WP_001556704.1|1614912_1615173_-	DUF1108 family protein	NA	G4KNN5	Staphylococcus_phage	100.0	2.0e-43
WP_000829610.1|1615177_1615495_-	hypothetical protein	NA	A0A2I6PEL3	Staphylococcus_phage	100.0	3.9e-33
WP_001285954.1|1615583_1615745_-	DUF1270 domain-containing protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
WP_001124198.1|1615756_1616020_-	helix-turn-helix domain-containing protein	NA	A0A2I6PEL8	Staphylococcus_phage	100.0	2.5e-46
WP_001037095.1|1616049_1616268_-	hypothetical protein	NA	A0A2I6PDV4	Staphylococcus_phage	100.0	5.0e-32
WP_001025595.1|1616264_1616591_-	hypothetical protein	NA	G4KNN2	Staphylococcus_phage	100.0	5.4e-54
WP_001662405.1|1616667_1616805_-	hypothetical protein	NA	A0ZS11	Staphylococcus_virus	97.8	3.7e-17
WP_000435343.1|1616824_1617085_-	hypothetical protein	NA	A0A2I6PDT7	Staphylococcus_phage	100.0	3.5e-40
WP_001148617.1|1617097_1617850_-	oxidoreductase	NA	G4KNN1	Staphylococcus_phage	100.0	1.1e-139
WP_000801108.1|1617910_1618138_+	hypothetical protein	NA	A7TWL9	Staphylococcus_phage	100.0	1.7e-38
WP_000502678.1|1618139_1618331_-	hypothetical protein	NA	A0A2I6PDT1	Staphylococcus_phage	100.0	9.5e-27
WP_000772137.1|1618387_1618597_+	hypothetical protein	NA	A0A2I6PDR8	Staphylococcus_phage	100.0	9.1e-31
WP_000939495.1|1618589_1618730_-	hypothetical protein	NA	A0A2I6PDT8	Staphylococcus_phage	100.0	1.9e-16
WP_000435346.1|1618744_1619188_-	hypothetical protein	NA	G4KNN0	Staphylococcus_phage	100.0	2.0e-75
WP_000548578.1|1619200_1619440_-	helix-turn-helix transcriptional regulator	NA	G4KNM9	Staphylococcus_phage	100.0	2.3e-38
WP_000094093.1|1619610_1620318_+	helix-turn-helix transcriptional regulator	NA	G4KNM8	Staphylococcus_phage	100.0	7.7e-130
WP_001049399.1|1620329_1620485_+	hypothetical protein	NA	A0A2I6PDR9	Staphylococcus_phage	100.0	6.3e-21
WP_001089804.1|1620471_1620657_+	hypothetical protein	NA	A0A2I6PDS4	Staphylococcus_phage	100.0	2.3e-25
WP_000705240.1|1620856_1621039_+	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_001013104.1|1621074_1621221_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000191466.1|1621217_1621832_-	hypothetical protein	NA	A0A2I6PEZ0	Staphylococcus_phage	100.0	6.7e-106
WP_000264751.1|1621957_1623163_+|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
WP_001838630.1|1623205_1625233_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	92.5	3.3e-109
1623164:1623275	attR	CTTAAATCTGCCCTTTTTTTGCCCTTATATTTTTTACAAGCTTTATAAAACGCTTGAGAACACTGGCGTTAAAGCTTTTCTTGAAATAAACATATCATCATAATGAGATGGT	NA	NA	NA	NA
WP_001824281.1|1625244_1626153_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000987767.1|1626399_1628151_-	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	33.6	2.6e-22
WP_000064078.1|1628131_1628857_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
>prophage 8
NZ_CP009828	Staphylococcus aureus strain MS4 chromosome, complete genome	2709797	1683979	1692291	2709797	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1683979_1684765_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924210.1|1684890_1685781_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	3.4e-26
WP_001062177.1|1685790_1687137_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000683914.1|1687250_1688351_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	30.6	1.0e-08
WP_000624567.1|1688353_1689031_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1689161_1690268_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217251.1|1690491_1692291_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.5e-54
>prophage 9
NZ_CP009828	Staphylococcus aureus strain MS4 chromosome, complete genome	2709797	1762935	1771978	2709797	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364543.1|1762935_1763454_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.8	2.1e-28
WP_058142979.1|1763475_1765749_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	1.8e-63
WP_000749798.1|1765951_1768231_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1768505_1768766_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1768784_1769924_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019166.1|1769946_1770972_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005767.1|1770973_1771978_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 10
NZ_CP009828	Staphylococcus aureus strain MS4 chromosome, complete genome	2709797	1897955	1943882	2709797	tRNA,protease	Staphylococcus_phage(94.29%)	43	NA	NA
WP_001050576.1|1897955_1904513_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	93.2	1.2e-290
WP_000836467.1|1904838_1905150_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	98.1	5.3e-51
WP_001108730.1|1905171_1907586_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_001025062.1|1907877_1909059_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.5	1.2e-217
WP_000526539.1|1909168_1910122_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764429.1|1910118_1910682_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	98.9	9.2e-102
WP_000757543.1|1910801_1911203_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_058142981.1|1911774_1912602_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014937042.1|1912604_1912724_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196343.1|1912835_1913837_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	98.8	1.7e-183
WP_001008551.1|1913958_1914423_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001159028.1|1914435_1915617_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	99.2	1.6e-225
WP_000493883.1|1915627_1916260_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	2.4e-111
WP_000384177.1|1916266_1917298_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.5	9.0e-196
WP_001261664.1|1917790_1919293_-	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.1e-29
WP_000221186.1|1919814_1920129_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	95.2	1.4e-51
WP_000989100.1|1920128_1921421_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	97.4	2.2e-223
WP_000163239.1|1921438_1921831_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	99.2	6.9e-72
WP_001032836.1|1922235_1923090_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.1	4.9e-38
WP_000384172.1|1923365_1923590_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001153740.1|1924367_1924811_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030460.1|1924797_1925241_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.0	5.4e-57
WP_025175276.1|1925538_1926174_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_058142982.1|1926340_1926961_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001096492.1|1927429_1928143_-	transaldolase	NA	M1PR54	Cyanophage	34.5	1.2e-18
WP_000091445.1|1928400_1928703_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200550.1|1928958_1929324_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	98.3	6.2e-59
WP_000623471.1|1929320_1929674_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
WP_000453310.1|1929923_1930757_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	1.3e-157
WP_000366163.1|1930968_1931877_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933822.1|1932001_1933195_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000109912.1|1933566_1935159_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_078065176.1|1935452_1936199_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.0	7.8e-141
WP_000672009.1|1936203_1936677_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	3.6e-83
WP_000718107.1|1936742_1937000_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778518.1|1936996_1937998_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.9	4.8e-186
WP_000348384.1|1938002_1939481_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	96.7	3.4e-281
WP_078065177.1|1939640_1940096_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	97.9	4.0e-79
WP_001838615.1|1940398_1941049_+	hypothetical protein	NA	A0A2H4PQM8	Staphylococcus_phage	68.5	4.7e-33
WP_000070638.1|1941129_1942125_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	92.7	1.7e-66
WP_000669039.1|1942200_1942827_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	84.6	5.8e-81
WP_000627534.1|1942867_1943209_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	93.8	2.8e-53
WP_000414219.1|1943309_1943882_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.8	3.2e-25
>prophage 11
NZ_CP009828	Staphylococcus aureus strain MS4 chromosome, complete genome	2709797	1949436	1957750	2709797		Staphylococcus_phage(77.78%)	9	NA	NA
WP_001044434.1|1949436_1950291_-	M23 family metallopeptidase	NA	E5G070	Clostridium_phage	37.9	6.4e-06
WP_049280116.1|1950541_1951087_-	hypothetical protein	NA	A0A2H4PQP5	Staphylococcus_phage	32.5	1.8e-09
WP_000669789.1|1951503_1951683_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|1951993_1952254_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702263.1|1952306_1952657_-	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_000727649.1|1953341_1953791_+	chemotaxis-inhibiting protein CHIPS	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
WP_165596011.1|1953885_1954227_-	hypothetical protein	NA	R9QTN8	Staphylococcus_phage	97.3	6.4e-58
WP_001066124.1|1954522_1955284_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	44.2	1.1e-54
WP_000206347.1|1956961_1957750_+	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.4	7.0e-140
