assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001514435.1_ASM151443v1	NZ_CP013939	Streptococcus thermophilus strain S9 chromosome, complete genome	1	70568-70669	1	CRISPRCasFinder	no	csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2	csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2,DinG,csn2,cas1,cas9,DEDDh,cas3	Type III-B,Type III-C,Type III-D,Type III-A	GTCCCCTCTCGAGGTAATTAGGTTTATATC	30	0	0	NA	NA	NA	1	1	TypeIII-B,TypeIII-C,TypeIII-D,TypeIII-A	csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2,DinG,csn2,cas1,cas9,DEDDh,cas3	NA,NA|70aa|down_5|NZ_CP013939.1_77975_78185_-,NA|151aa|down_8|NZ_CP013939.1_82315_82768_-,NA|85aa|down_9|NZ_CP013939.1_82764_83019_-	NA|148aa|up_9|NZ_CP013939.1_60827_61271_-	PRK06529, PRK06529, amidase; Provisional	NA|210aa|up_8|NZ_CP013939.1_61475_62105_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|232aa|up_7|NZ_CP013939.1_62193_62889_-	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase	csm6|392aa|up_6|NZ_CP013939.1_63088_64264_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|358aa|up_5|NZ_CP013939.1_64419_65493_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|300aa|up_4|NZ_CP013939.1_65495_66395_-	pfam17953, Csm4_C, CRISPR Csm4 C-terminal domain	csm3gr7|221aa|up_3|NZ_CP013939.1_66396_67059_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|127aa|up_2|NZ_CP013939.1_67058_67439_-	pfam03750, Csm2_III-A, Csm2 Type III-A	cas10|759aa|up_1|NZ_CP013939.1_67442_69719_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|244aa|up_0|NZ_CP013939.1_69699_70431_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas2|110aa|down_0|NZ_CP013939.1_70769_71099_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|316aa|down_1|NZ_CP013939.1_72240_73188_-	PRK07259, PRK07259, dihydroorotate dehydrogenase	NA|268aa|down_2|NZ_CP013939.1_73206_74010_-	PRK00054, PRK00054, dihydroorotate dehydrogenase electron transfer subunit; Reviewed	NA|183aa|down_3|NZ_CP013939.1_74251_74800_-	cd03135, GATase1_DJ-1, Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1	NA|553aa|down_4|NZ_CP013939.1_75941_77600_+	pfam05833, FbpA, Fibronectin-binding protein A N-terminus (FbpA)	NA|70aa|down_5|NZ_CP013939.1_77975_78185_-	NA	NA|212aa|down_6|NZ_CP013939.1_80508_81144_+	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065	NA|255aa|down_7|NZ_CP013939.1_81205_81970_-	cd09007, NP-I_spr0068, uncharacterized subfamily of the nucleoside phosphorylase-I family	NA|151aa|down_8|NZ_CP013939.1_82315_82768_-	NA	NA|85aa|down_9|NZ_CP013939.1_82764_83019_-	NA
GCF_001514435.1_ASM151443v1	NZ_CP013939	Streptococcus thermophilus strain S9 chromosome, complete genome	2	304100-305059	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2,DinG,csn2,cas1,cas9,DEDDh,cas3	Type II-A,Type II-B,Type II-C	GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC,GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC,GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	14,14,14	14	TypeII-A,TypeII-B,TypeII-C	csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2,DinG,csn2,cas1,cas9,DEDDh,cas3	NA,NA	NA|99aa|up_9|NZ_CP013939.1_295947_296244_+	pfam11674, DUF3270, Protein of unknown function (DUF3270)	NA|145aa|up_8|NZ_CP013939.1_296270_296705_-	pfam12732, YtxH, YtxH-like protein	NA|133aa|up_7|NZ_CP013939.1_296717_297116_-	COG4768, COG4768, Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain [General function prediction only]	NA|264aa|up_6|NZ_CP013939.1_297238_298030_-	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|310aa|up_5|NZ_CP013939.1_298029_298959_-	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|88aa|up_4|NZ_CP013939.1_299087_299351_-	COG1983, PspC, Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]	NA|147aa|up_3|NZ_CP013939.1_299417_299858_-	PRK04351, PRK04351, SprT family protein	NA|711aa|up_2|NZ_CP013939.1_299844_301977_-	COG2183, Tex, Transcriptional accessory protein [Transcription]	NA|301aa|up_1|NZ_CP013939.1_302340_303243_+	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|272aa|up_0|NZ_CP013939.1_303242_304058_+	COG3689, COG3689, Predicted membrane protein [Function unknown]	csn2|351aa|down_0|NZ_CP013939.1_305122_306175_-	pfam16813, Cas_St_Csn2, CRISPR-associated protein Csn2 subfamily St	cas2|108aa|down_1|NZ_CP013939.1_306171_306495_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|304aa|down_2|NZ_CP013939.1_306496_307408_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1129aa|down_3|NZ_CP013939.1_307585_310972_-	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	NA|204aa|down_4|NZ_CP013939.1_311228_311840_-	pfam09911, DUF2140, Uncharacterized protein conserved in bacteria (DUF2140)	NA|153aa|down_5|NZ_CP013939.1_312436_312895_-	COG3392, COG3392, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|74aa|down_6|NZ_CP013939.1_312894_313116_-	COG3655, COG3655, Predicted transcriptional regulator [Transcription]	NA|454aa|down_7|NZ_CP013939.1_314323_315685_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|183aa|down_8|NZ_CP013939.1_315900_316449_+	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|355aa|down_9|NZ_CP013939.1_316488_317553_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]
