assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001534725.1_ASM153472v1	NZ_CP013975	Piscirickettsia salmonis strain CGR02, complete genome	1	1099990-1100085	1	CRISPRCasFinder	no		DEDDh,cas3,DinG,csa3	Orphan	CAGAGTGTCCTGAAGCCCCTTGAG	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA|61aa|up_9|NZ_CP013975.1_1089418_1089601_-,NA|436aa|up_8|NZ_CP013975.1_1090149_1091457_+,NA|126aa|up_7|NZ_CP013975.1_1091916_1092294_-,NA|47aa|up_4|NZ_CP013975.1_1094251_1094392_-,NA|66aa|up_3|NZ_CP013975.1_1094592_1094790_+,NA|307aa|down_9|NZ_CP013975.1_1116688_1117609_-	NA|61aa|up_9|NZ_CP013975.1_1089418_1089601_-	NA	NA|436aa|up_8|NZ_CP013975.1_1090149_1091457_+	NA	NA|126aa|up_7|NZ_CP013975.1_1091916_1092294_-	NA	NA|134aa|up_6|NZ_CP013975.1_1092438_1092840_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|260aa|up_5|NZ_CP013975.1_1093404_1094184_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|47aa|up_4|NZ_CP013975.1_1094251_1094392_-	NA	NA|66aa|up_3|NZ_CP013975.1_1094592_1094790_+	NA	NA|200aa|up_2|NZ_CP013975.1_1094927_1095527_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|491aa|up_1|NZ_CP013975.1_1095709_1097182_-	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|582aa|up_0|NZ_CP013975.1_1097584_1099330_-	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|648aa|down_0|NZ_CP013975.1_1101143_1103087_-	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]	NA|468aa|down_1|NZ_CP013975.1_1103232_1104636_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|210aa|down_2|NZ_CP013975.1_1104755_1105385_-	cd17569, REC_HupR-like, phosphoacceptor receiver (REC) domain of hydrogen uptake protein regulator (HupR) and similar domains	NA|240aa|down_3|NZ_CP013975.1_1105623_1106343_-	PRK04949, PRK04949, putative sulfate transport protein CysZ; Validated	NA|1180aa|down_4|NZ_CP013975.1_1106456_1109996_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|277aa|down_5|NZ_CP013975.1_1110062_1110893_+	pfam04354, ZipA_C, ZipA, C-terminal FtsZ-binding domain	NA|680aa|down_6|NZ_CP013975.1_1110879_1112919_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|352aa|down_7|NZ_CP013975.1_1112934_1113990_+	PRK11778, PRK11778, putative inner membrane peptidase; Provisional	NA|177aa|down_8|NZ_CP013975.1_1114000_1114531_+	pfam06508, QueC, Queuosine biosynthesis protein QueC	NA|307aa|down_9|NZ_CP013975.1_1116688_1117609_-	NA
GCF_001534725.1_ASM153472v1	NZ_CP013975	Piscirickettsia salmonis strain CGR02, complete genome	2	1672037-1672146	2	CRISPRCasFinder	no		DEDDh,cas3,DinG,csa3	Orphan	TATCTTTAAGTTGCTCCCAATCTCCT	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA|55aa|up_9|NZ_CP013975.1_1665046_1665211_-,NA|55aa|up_7|NZ_CP013975.1_1666378_1666543_-,NA|50aa|up_6|NZ_CP013975.1_1666722_1666872_-,NA|56aa|up_1|NZ_CP013975.1_1670123_1670291_-,NA|54aa|down_0|NZ_CP013975.1_1672843_1673005_+,NA|70aa|down_1|NZ_CP013975.1_1673539_1673749_-,NA|59aa|down_4|NZ_CP013975.1_1677633_1677810_+,NA|219aa|down_6|NZ_CP013975.1_1678654_1679311_+,NA|762aa|down_7|NZ_CP013975.1_1679299_1681585_-,NA|120aa|down_8|NZ_CP013975.1_1681858_1682218_-	NA|55aa|up_9|NZ_CP013975.1_1665046_1665211_-	NA	NA|292aa|up_8|NZ_CP013975.1_1665501_1666377_+	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|55aa|up_7|NZ_CP013975.1_1666378_1666543_-	NA	NA|50aa|up_6|NZ_CP013975.1_1666722_1666872_-	NA	NA|325aa|up_5|NZ_CP013975.1_1666951_1667926_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|434aa|up_4|NZ_CP013975.1_1667922_1669224_-	TIGR00361, Recombination_protein_2, DNA internalization-related competence protein ComEC/Rec2	NA|116aa|up_3|NZ_CP013975.1_1669241_1669589_+	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062)	NA|63aa|up_2|NZ_CP013975.1_1669835_1670024_+	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062)	NA|56aa|up_1|NZ_CP013975.1_1670123_1670291_-	NA	NA|302aa|up_0|NZ_CP013975.1_1670531_1671437_-	PRK10837, PRK10837, putative DNA-binding transcriptional regulator; Provisional	NA|54aa|down_0|NZ_CP013975.1_1672843_1673005_+	NA	NA|70aa|down_1|NZ_CP013975.1_1673539_1673749_-	NA	NA|438aa|down_2|NZ_CP013975.1_1674864_1676178_-	PRK10590, PRK10590, ATP-dependent RNA helicase RhlE; Provisional	NA|382aa|down_3|NZ_CP013975.1_1676413_1677559_+	cd06234, M14_PaCCP-like, Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases similar to Pseudomonas aerugnosa CCP (PaCCP)	NA|59aa|down_4|NZ_CP013975.1_1677633_1677810_+	NA	NA|211aa|down_5|NZ_CP013975.1_1677845_1678478_-	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion]	NA|219aa|down_6|NZ_CP013975.1_1678654_1679311_+	NA	NA|762aa|down_7|NZ_CP013975.1_1679299_1681585_-	NA	NA|120aa|down_8|NZ_CP013975.1_1681858_1682218_-	NA	NA|212aa|down_9|NZ_CP013975.1_1682499_1683135_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]
GCF_001534725.1_ASM153472v1	NZ_CP013978	Piscirickettsia salmonis strain CGR02 plasmid pPSCRG02-4, complete sequence	1	31121-31220	1	CRISPRCasFinder	no			Orphan	AAAAGCACCTAGTTTGTGATTAAAAAGCACCTAGTT	36	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,DinG,csa3	NA|86aa|up_7|NZ_CP013978.1_22259_22517_-,NA|155aa|up_6|NZ_CP013978.1_23783_24248_+,NA|73aa|up_4|NZ_CP013978.1_25786_26005_+,NA|375aa|down_0|NZ_CP013978.1_31256_32381_-,NA|119aa|down_9|NZ_CP013978.1_39481_39838_-	NA|51aa|up_9|NZ_CP013978.1_21052_21205_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|336aa|up_8|NZ_CP013978.1_21252_22260_-	pfam00665, rve, Integrase core domain	NA|86aa|up_7|NZ_CP013978.1_22259_22517_-	NA	NA|155aa|up_6|NZ_CP013978.1_23783_24248_+	NA	NA|57aa|up_5|NZ_CP013978.1_24586_24757_+	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain	NA|73aa|up_4|NZ_CP013978.1_25786_26005_+	NA	NA|91aa|up_3|NZ_CP013978.1_26330_26603_-	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system	NA|87aa|up_2|NZ_CP013978.1_26606_26867_-	PRK11409, PRK11409, YoeB-YefM toxin-antitoxin system antitoxin YefM	NA|197aa|up_1|NZ_CP013978.1_27139_27730_+	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|468aa|up_0|NZ_CP013978.1_27757_29161_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|375aa|down_0|NZ_CP013978.1_31256_32381_-	NA	NA|109aa|down_1|NZ_CP013978.1_32380_32707_-	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family	NA|74aa|down_2|NZ_CP013978.1_33223_33445_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|287aa|down_3|NZ_CP013978.1_33434_34295_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|283aa|down_4|NZ_CP013978.1_34291_35140_+	TIGR00180, Probable_chromosome-partitioning_protein_ParB, ParB/RepB/Spo0J family partition protein	NA|432aa|down_5|NZ_CP013978.1_35583_36879_+	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase	NA|247aa|down_6|NZ_CP013978.1_37173_37914_+	pfam07366, SnoaL, SnoaL-like polyketide cyclase	NA|234aa|down_7|NZ_CP013978.1_37899_38601_-	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|262aa|down_8|NZ_CP013978.1_38576_39362_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|119aa|down_9|NZ_CP013978.1_39481_39838_-	NA
