assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001534765.1_ASM153476v1	NZ_CP013217	Kurthia sp. 11kri321, complete genome	1	467307-467464	1	CRISPRCasFinder	no		WYL,RT,DEDDh,cas3,csa3,cas2,cas1,cas4,cas5,cas7,cas6,DinG	Orphan	TGTGGTGAAGTGGTTAACACACCGGATTGTGGTTCCGGCATTCGTGGGTTCGAT	54	0	0	NA	NA	NA	1	1	Orphan	WYL,RT,DEDDh,cas3,csa3,cas2,cas1,cas4,cas5,cas7,cas6,DinG	NA,NA|61aa|down_9|NZ_CP013217.1_476290_476473_+	NA|83aa|up_9|NZ_CP013217.1_451346_451595_+	pfam14043, WVELL, WVELL protein	NA|324aa|up_8|NZ_CP013217.1_451917_452889_-	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase	NA|351aa|up_7|NZ_CP013217.1_452971_454024_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|183aa|up_6|NZ_CP013217.1_454160_454709_+	PRK13662, PRK13662, hypothetical protein; Provisional	NA|582aa|up_5|NZ_CP013217.1_454892_456638_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|364aa|up_4|NZ_CP013217.1_456683_457775_-	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|158aa|up_3|NZ_CP013217.1_457929_458403_+	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|315aa|up_2|NZ_CP013217.1_458399_459344_+	cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase	NA|148aa|up_1|NZ_CP013217.1_459481_459925_+	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|288aa|up_0|NZ_CP013217.1_460095_460959_+	pfam14540, NTF-like, Nucleotidyltransferase-like	NA|261aa|down_0|NZ_CP013217.1_467937_468720_+	pfam13427, DUF4111, Domain of unknown function (DUF4111)	NA|466aa|down_1|NZ_CP013217.1_469031_470429_+	TIGR00909, putative_amino_acid_transporter, amino acid transporter	NA|258aa|down_2|NZ_CP013217.1_470664_471438_+	cd08583, PI-PLCc_GDPD_SF_unchar1, Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases	NA|192aa|down_3|NZ_CP013217.1_471461_472037_-	pfam03352, Adenine_glyco, Methyladenine glycosylase	NA|307aa|down_4|NZ_CP013217.1_472255_473176_+	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein	NA|230aa|down_5|NZ_CP013217.1_473212_473902_-	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]	NA|378aa|down_6|NZ_CP013217.1_473962_475096_+	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|158aa|down_7|NZ_CP013217.1_475112_475586_+	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL	NA|185aa|down_8|NZ_CP013217.1_475636_476191_-	cd07523, HAD_YsbA-like, uncharacterized family of the haloacid dehalogenase-like superfamily, similar to the uncharacterized Lactococcus lactis YsbA	NA|61aa|down_9|NZ_CP013217.1_476290_476473_+	NA
GCF_001534765.1_ASM153476v1	NZ_CP013217	Kurthia sp. 11kri321, complete genome	2	1714286-1716211	2,1,1,3	CRISPRCasFinder,CRT,PILER-CR,CRISPRCasFinder	no	cas2,cas1,cas4,cas3,cas5,cas7,cas6	WYL,RT,DEDDh,cas3,csa3,cas2,cas1,cas4,cas5,cas7,cas6,DinG	Unclear	CTTTAAATCCCTCTATGTTCAGATAAAAT,CTTTAAATCNCTCTATGTTCAGATAAAAT,CTTTAAATCCCTCTATGTTCAGATAAAAT,CTTTAAATCCCTCTATGTTCAGATAAAAT	29,29,29,29	0	0	NA	NA	NA:NA:NA:NA	27,29,29,27	29	Unclear	WYL,RT,DEDDh,cas3,csa3,cas2,cas1,cas4,cas5,cas7,cas6,DinG	NA|157aa|up_0|NZ_CP013217.1_1713682_1714153_+,NA|595aa|down_6|NZ_CP013217.1_1722036_1723821_-,NA|98aa|down_8|NZ_CP013217.1_1724897_1725191_-,NA|159aa|down_9|NZ_CP013217.1_1725277_1725754_-	NA|221aa|up_9|NZ_CP013217.1_1705788_1706451_-	pfam02570, CbiC, Precorrin-8X methylmutase	NA|252aa|up_8|NZ_CP013217.1_1706486_1707242_-	pfam02571, CbiJ, Precorrin-6x reductase CbiJ/CobK	NA|304aa|up_7|NZ_CP013217.1_1707238_1708150_-	COG2138, COG2138, Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism]	NA|544aa|up_6|NZ_CP013217.1_1708161_1709793_-	cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-methyltransferase (also named CobJ or CbiH)	NA|125aa|up_5|NZ_CP013217.1_1709792_1710167_-	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE)	NA|227aa|up_4|NZ_CP013217.1_1711109_1711790_+	PRK08319, PRK08319, energy-coupling factor ABC transporter permease	NA|98aa|up_3|NZ_CP013217.1_1711789_1712083_+	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein	NA|260aa|up_2|NZ_CP013217.1_1712069_1712849_+	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ	NA|275aa|up_1|NZ_CP013217.1_1712845_1713670_+	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|157aa|up_0|NZ_CP013217.1_1713682_1714153_+	NA	cas2|88aa|down_0|NZ_CP013217.1_1716363_1716627_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|328aa|down_1|NZ_CP013217.1_1716628_1717612_-	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas4|167aa|down_2|NZ_CP013217.1_1717616_1718117_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|770aa|down_3|NZ_CP013217.1_1718129_1720439_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|235aa|down_4|NZ_CP013217.1_1720441_1721146_-	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|309aa|down_5|NZ_CP013217.1_1721126_1722053_-	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	NA|595aa|down_6|NZ_CP013217.1_1722036_1723821_-	NA	cas6|235aa|down_7|NZ_CP013217.1_1723833_1724538_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|98aa|down_8|NZ_CP013217.1_1724897_1725191_-	NA	NA|159aa|down_9|NZ_CP013217.1_1725277_1725754_-	NA
GCF_001534765.1_ASM153476v1	NZ_CP013217	Kurthia sp. 11kri321, complete genome	3	2118299-2118385	4	CRISPRCasFinder	no	cas3	WYL,RT,DEDDh,cas3,csa3,cas2,cas1,cas4,cas5,cas7,cas6,DinG	Unclear	TTTATTCTTAACACACATTATTTTA	25	0	0	NA	NA	NA	1	1	Unclear	WYL,RT,DEDDh,cas3,csa3,cas2,cas1,cas4,cas5,cas7,cas6,DinG	NA,NA	NA|93aa|up_9|NZ_CP013217.1_2111173_2111452_-	COG2257, COG2257, Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]	NA|668aa|up_8|NZ_CP013217.1_2111448_2113452_-	PRK11281, PRK11281, mechanosensitive channel MscK	NA|257aa|up_7|NZ_CP013217.1_2113459_2114230_-	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like	NA|285aa|up_6|NZ_CP013217.1_2114334_2115189_-	PRK09563, rbgA, GTPase YlqF; Reviewed	NA|189aa|up_5|NZ_CP013217.1_2115205_2115772_-	TIGR02227, Inactive_signal_peptidase_IA	NA|115aa|up_4|NZ_CP013217.1_2115889_2116234_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|246aa|up_3|NZ_CP013217.1_2116370_2117108_-	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|172aa|up_2|NZ_CP013217.1_2117107_2117623_-	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|78aa|up_1|NZ_CP013217.1_2117687_2117921_-	COG1837, COG1837, Predicted RNA-binding protein (contains KH domain) [General function prediction only]	NA|91aa|up_0|NZ_CP013217.1_2117953_2118226_-	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed	NA|111aa|down_0|NZ_CP013217.1_2119750_2120083_-	PRK00118, PRK00118, putative DNA-binding protein; Validated	NA|417aa|down_1|NZ_CP013217.1_2120544_2121795_-	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|1187aa|down_2|NZ_CP013217.1_2121810_2125371_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|251aa|down_3|NZ_CP013217.1_2125381_2126134_-	PRK00102, rnc, ribonuclease III; Reviewed	NA|79aa|down_4|NZ_CP013217.1_2126295_2126532_-	PRK00982, acpP, acyl carrier protein; Provisional	NA|248aa|down_5|NZ_CP013217.1_2126649_2127393_-	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|320aa|down_6|NZ_CP013217.1_2127382_2128342_-	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|331aa|down_7|NZ_CP013217.1_2128341_2129334_-	PRK05331, PRK05331, phosphate acyltransferase PlsX	NA|193aa|down_8|NZ_CP013217.1_2129330_2129909_-	PRK04424, PRK04424, transcription factor FapR	cas3|683aa|down_9|NZ_CP013217.1_2130012_2132061_-	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional
GCF_001534765.1_ASM153476v1	NZ_CP013217	Kurthia sp. 11kri321, complete genome	4	2423026-2423122	5	CRISPRCasFinder	no	WYL	WYL,RT,DEDDh,cas3,csa3,cas2,cas1,cas4,cas5,cas7,cas6,DinG	Unclear	CCTCGAATGGCCCGTTTGATCGGATGAATGGCCC	34	0	0	NA	NA	NA	1	1	Orphan	WYL,RT,DEDDh,cas3,csa3,cas2,cas1,cas4,cas5,cas7,cas6,DinG	NA,NA|390aa|down_7|NZ_CP013217.1_2432697_2433867_-,NA|205aa|down_8|NZ_CP013217.1_2434288_2434903_+,NA|102aa|down_9|NZ_CP013217.1_2435359_2435665_-	NA|207aa|up_9|NZ_CP013217.1_2412381_2413002_-	pfam07799, DUF1643, Protein of unknown function (DUF1643)	NA|206aa|up_8|NZ_CP013217.1_2413112_2413730_-	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|482aa|up_7|NZ_CP013217.1_2415116_2416562_-	PRK09442, panF, sodium/pantothenate symporter	NA|86aa|up_6|NZ_CP013217.1_2416561_2416819_-	pfam06196, DUF997, Protein of unknown function (DUF997)	NA|311aa|up_5|NZ_CP013217.1_2416948_2417881_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|62aa|up_4|NZ_CP013217.1_2418551_2418737_-	pfam13127, DUF3955, Protein of unknown function (DUF3955)	WYL|343aa|up_3|NZ_CP013217.1_2418797_2419826_-	pfam13280, WYL, WYL domain	NA|160aa|up_2|NZ_CP013217.1_2419912_2420392_+	COG0782, COG0782,  Uncharacterized conserved protein, YhbC family [Function unknown]	NA|194aa|up_1|NZ_CP013217.1_2420401_2420983_-	pfam07799, DUF1643, Protein of unknown function (DUF1643)	NA|416aa|up_0|NZ_CP013217.1_2421477_2422725_-	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|444aa|down_0|NZ_CP013217.1_2423282_2424614_+	cd01303, GDEase, Guanine deaminase (GDEase)	NA|58aa|down_1|NZ_CP013217.1_2424893_2425067_+	pfam13209, DUF4017, Protein of unknown function (DUF4017)	NA|311aa|down_2|NZ_CP013217.1_2425071_2426004_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|200aa|down_3|NZ_CP013217.1_2426257_2426857_+	TIGR02722, Penicillin-binding_protein_activator_LpoB, uncharacterized proteobacterial lipoprotein	NA|455aa|down_4|NZ_CP013217.1_2427721_2429086_-	pfam17936, Big_6, Bacterial Ig domain	NA|449aa|down_5|NZ_CP013217.1_2429795_2431142_-	pfam17936, Big_6, Bacterial Ig domain	NA|160aa|down_6|NZ_CP013217.1_2431334_2431814_-	PRK06759, PRK06759, RNA polymerase factor sigma-70; Validated	NA|390aa|down_7|NZ_CP013217.1_2432697_2433867_-	NA	NA|205aa|down_8|NZ_CP013217.1_2434288_2434903_+	NA	NA|102aa|down_9|NZ_CP013217.1_2435359_2435665_-	NA
