The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP006992	Methylobacterium sp. AMS5 chromosome, complete genome	5435450	53867	121014	5435450	integrase,transposase	uncultured_virus(22.22%)	60	87019:87037	121628:121646
WP_060772089.1|53867_54677_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_060768139.1|54916_55300_-	hypothetical protein	NA	G9E664	Micromonas_pusilla_virus	35.1	5.6e-10
WP_060768140.1|55411_55960_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060768141.1|56068_56341_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083530709.1|56428_57664_-	MFS transporter	NA	NA	NA	NA	NA
WP_060768142.1|57855_58383_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_083530954.1|58387_59047_-	heme-binding protein	NA	NA	NA	NA	NA
WP_060768144.1|59027_59957_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_060768145.1|60123_60861_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_060768146.1|61004_62408_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_083530955.1|62455_63577_+|transposase	IS630-like element ISMex18 family transposase	transposase	NA	NA	NA	NA
WP_144439893.1|63692_64232_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060768149.1|66931_67651_+	cytochrome C biogenesis protein	NA	NA	NA	NA	NA
WP_060768150.1|67758_68373_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060772092.1|68378_68636_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060768151.1|68963_69182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060768152.1|69345_71043_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA	NA
WP_060768153.1|71425_73048_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.9	1.9e-62
WP_060768154.1|73055_73412_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_060768155.1|73421_73661_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060768156.1|73878_74523_-	hypothetical protein	NA	Q71TJ0	Escherichia_phage	34.1	8.2e-14
WP_060768157.1|74533_75169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060768158.1|75270_76260_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060768159.1|76279_77464_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_060768160.1|77463_78504_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_060768161.1|78561_80616_+	HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_060768162.1|80673_81528_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_060768163.1|81575_82724_+	glycosyl transferase	NA	NA	NA	NA	NA
WP_060768164.1|82773_83715_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_060768165.1|83711_84767_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_060768166.1|84811_85480_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_060768167.1|85572_86463_-	TonB-dependent receptor	NA	NA	NA	NA	NA
87019:87037	attL	GACGTTTGCCATCGCCACA	NA	NA	NA	NA
WP_060768168.1|87816_88926_+	response regulator	NA	NA	NA	NA	NA
WP_060768171.1|90369_91326_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_060768172.1|91453_92242_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_060768173.1|92434_92881_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_060768174.1|92891_95150_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_060768175.1|95157_96165_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
WP_060768176.1|96489_97740_+	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	41.9	2.6e-88
WP_060768177.1|97755_99153_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_060772093.1|99803_100148_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_060768178.1|101778_102576_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_083530711.1|102562_102877_+	recombinase family protein	NA	NA	NA	NA	NA
WP_060768180.1|103394_103616_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060768181.1|103682_103892_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083530956.1|104167_105256_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A077KET4	Ralstonia_phage	45.5	2.1e-70
WP_158509721.1|105247_105349_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_144439895.1|106823_107778_+|transposase	IS630 family transposase	transposase	A0A1V0SCG6	Indivirus	26.1	2.3e-12
WP_060768185.1|108269_109481_-	alkene reductase	NA	NA	NA	NA	NA
WP_060768186.1|109924_111082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060768187.1|111388_111832_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_060768188.1|112395_112857_-	DUF1931 family protein	NA	NA	NA	NA	NA
WP_060768189.1|112972_113416_-	thioredoxin TrxC	NA	A0A023NHA9	Dinoroseobacter_phage	40.2	7.9e-16
WP_060768190.1|114125_114764_-	HdeD family acid-resistance protein	NA	NA	NA	NA	NA
WP_083530713.1|114818_115487_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
WP_060768192.1|115959_116682_-	DUF1211 domain-containing protein	NA	NA	NA	NA	NA
WP_060768193.1|116872_118519_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	60.1	8.2e-167
WP_060768194.1|118571_118862_-	co-chaperone GroES	NA	A0A221S4G8	uncultured_virus	58.5	2.4e-21
WP_060772094.1|119057_119417_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060768195.1|120201_121014_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
121628:121646	attR	GACGTTTGCCATCGCCACA	NA	NA	NA	NA
>prophage 2
NZ_CP006992	Methylobacterium sp. AMS5 chromosome, complete genome	5435450	1381342	1394095	5435450	protease,head,tail	Paracoccus_phage(37.5%)	15	NA	NA
WP_060769087.1|1381342_1381906_-	lysozyme	NA	W6E9Q2	Rhizobium_phage	41.4	1.4e-25
WP_060769088.1|1382026_1383109_-	DUF2793 domain-containing protein	NA	A0A0K1LM54	Rhodobacter_phage	39.1	1.5e-36
WP_060769089.1|1383133_1387036_-	hypothetical protein	NA	A0A0B5A7K5	Paracoccus_phage	36.0	3.8e-194
WP_060769090.1|1387062_1387527_-	peptidase P60	NA	A0A1V0DYB6	Dinoroseobacter_phage	45.4	1.1e-28
WP_060769091.1|1387534_1388428_-	DUF2163 domain-containing protein	NA	A0A0B5A5B8	Paracoccus_phage	42.0	9.6e-61
WP_060769092.1|1388438_1389080_-	DUF2460 domain-containing protein	NA	A0A0B5A2K3	Paracoccus_phage	50.0	6.2e-46
WP_060769093.1|1389333_1389960_-|tail	phage tail tape measure protein	tail	G9JXH3	Shigella_phage	68.3	7.3e-07
WP_060769094.1|1389959_1390190_-|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_060769095.1|1390186_1390513_-	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_060769096.1|1390515_1390926_-|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_060769097.1|1390954_1391374_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_060769098.1|1391370_1391712_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_060769099.1|1391734_1392310_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060769100.1|1392343_1393099_+|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_060769101.1|1393246_1394095_+|protease	trypsin-like serine protease	protease	I6WTR7	Cotesia_sesamiae_Mombasa_bracovirus	23.4	2.9e-06
>prophage 3
NZ_CP006992	Methylobacterium sp. AMS5 chromosome, complete genome	5435450	1613206	1677582	5435450	tRNA,transposase	Erysipelothrix_phage(14.29%)	49	NA	NA
WP_060769282.1|1613206_1614286_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	32.7	3.8e-27
WP_060769283.1|1614350_1616774_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_060769284.1|1616799_1617675_+	DUF1186 domain-containing protein	NA	G9E3U3	Emiliania_huxleyi_virus	33.6	3.9e-06
WP_144439940.1|1617622_1618441_-	molybdopterin-synthase adenylyltransferase MoeB	NA	A0A1V0SAV8	Catovirus	28.0	3.2e-10
WP_060769286.1|1618702_1619866_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_060769287.1|1619850_1620609_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_060769288.1|1620622_1621564_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	28.5	5.4e-06
WP_056204483.1|1621574_1622090_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	47.0	4.0e-27
WP_060769289.1|1622203_1623478_-	DUF2029 domain-containing protein	NA	NA	NA	NA	NA
WP_060769290.1|1623739_1624345_-	recombination protein RecR	NA	NA	NA	NA	NA
WP_060769291.1|1624672_1626292_+	phosphoenolpyruvate carboxykinase	NA	A0A2H4PQN1	Staphylococcus_phage	47.7	4.0e-134
WP_060769292.1|1626337_1627615_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_083530789.1|1627732_1629472_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_060772196.1|1629723_1630449_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_060769293.1|1630800_1631763_+	malate dehydrogenase	NA	NA	NA	NA	NA
WP_060769294.1|1631871_1633068_+	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_060769295.1|1633076_1633961_+	succinate--CoA ligase subunit alpha	NA	NA	NA	NA	NA
WP_060769296.1|1634201_1637192_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_060769297.1|1637275_1638616_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_144439941.1|1638701_1639895_+	DUF4241 domain-containing protein	NA	NA	NA	NA	NA
WP_060769298.1|1639891_1641295_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.5	2.6e-44
WP_060769299.1|1641501_1643127_+	hybrid sensor histidine kinase/response regulator	NA	NA	NA	NA	NA
WP_060769300.1|1643186_1643819_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060769301.1|1643800_1644439_-	sarcosine oxidase subunit gamma	NA	NA	NA	NA	NA
WP_060769302.1|1644431_1647461_-	sarcosine oxidase subunit alpha family protein	NA	NA	NA	NA	NA
WP_060769303.1|1647457_1647745_-	sarcosine oxidase subunit delta	NA	NA	NA	NA	NA
WP_060769304.1|1647930_1649181_-	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA	NA
WP_060769305.1|1649381_1650380_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_060769306.1|1650553_1651489_+	glutamine amidotransferase family protein	NA	NA	NA	NA	NA
WP_060769307.1|1651488_1652178_+	protein glxC	NA	NA	NA	NA	NA
WP_060769308.1|1652177_1653515_+	FMN-binding glutamate synthase family protein	NA	NA	NA	NA	NA
WP_060769309.1|1653606_1654905_+	type III glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_060769310.1|1655095_1655605_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158509732.1|1656369_1656768_+|transposase	transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	48.3	2.6e-26
WP_060769312.1|1658121_1658421_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060769313.1|1658612_1659641_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_158509733.1|1660523_1662668_-	recombinase family protein	NA	A0A2K5B2B2	Erysipelothrix_phage	28.8	9.5e-14
WP_158509734.1|1662764_1664699_-	recombinase family protein	NA	R9TP69	Rhizobium_phage	25.0	1.6e-23
WP_083530795.1|1665395_1665716_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083530796.1|1666373_1668437_-	AAA family ATPase	NA	C7U047	Ostreococcus_tauri_virus	32.2	3.8e-36
WP_060769316.1|1668385_1669219_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083530797.1|1669292_1670057_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144439942.1|1670278_1670638_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_060769317.1|1670609_1670849_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_083530798.1|1671644_1671911_+|transposase	transposase	transposase	Q6J1X2	Lactobacillus_phage	44.6	4.4e-06
WP_144439943.1|1672225_1673408_+|transposase	IS3-like element ISMex5 family transposase	transposase	S5WIU1	Leptospira_phage	32.4	1.2e-31
WP_144439944.1|1673405_1673999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060769320.1|1674787_1676386_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_135300043.1|1676414_1677582_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	37.6	3.5e-39
>prophage 4
NZ_CP006992	Methylobacterium sp. AMS5 chromosome, complete genome	5435450	3469228	3535996	5435450	tRNA,protease,transposase	Caulobacter_phage(12.5%)	57	NA	NA
WP_060770666.1|3469228_3470746_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_060770667.1|3470752_3471598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060770668.1|3472330_3472738_+	helix-turn-helix transcriptional regulator	NA	K4K6E9	Caulobacter_phage	33.7	1.2e-07
WP_060770669.1|3472945_3474121_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	52.4	2.3e-94
WP_060770670.1|3474130_3474868_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_060770671.1|3475101_3477834_-	type I DNA topoisomerase	NA	A0A0G2Y787	Acanthamoeba_polyphaga_mimivirus	30.9	1.0e-97
WP_060772315.1|3477982_3478927_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_060770672.1|3478953_3479826_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060770673.1|3479990_3480302_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060770674.1|3480576_3481524_+	aspartate carbamoyltransferase catalytic subunit	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	32.2	4.6e-29
WP_144439982.1|3481527_3481734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060768287.1|3481777_3482590_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_083530871.1|3482692_3483076_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060770677.1|3483389_3484700_+	dihydroorotase	NA	NA	NA	NA	NA
WP_060770678.1|3484696_3485305_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_060770679.1|3485336_3486530_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_060770680.1|3486847_3487681_+	GDSL family lipase	NA	NA	NA	NA	NA
WP_060770681.1|3487677_3488829_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060770682.1|3488867_3489542_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_060770683.1|3489538_3490036_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_060770684.1|3490032_3490611_-	SMI1/KNR4 family protein	NA	NA	NA	NA	NA
WP_060770685.1|3490771_3490957_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060770686.1|3491114_3491402_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_060770687.1|3491498_3492980_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_060772316.1|3492976_3493282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060770688.1|3493339_3493663_-	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_060770689.1|3493808_3496973_-	multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.6	9.6e-55
WP_060770690.1|3497041_3498367_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_060770691.1|3498745_3499183_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060770692.1|3499416_3500016_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_060770694.1|3501299_3501740_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_060770695.1|3501736_3502093_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_144440064.1|3502199_3503678_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	41.9	7.0e-101
WP_015950068.1|3504492_3505500_+	2-hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	39.6	4.4e-62
WP_060770696.1|3505503_3507897_+	glycoside hydrolase family 65 protein	NA	NA	NA	NA	NA
WP_060770697.1|3508038_3509634_+	YidE/YbjL duplication	NA	NA	NA	NA	NA
WP_060770698.1|3509931_3512217_-	glycoside hydrolase family 65 protein	NA	NA	NA	NA	NA
WP_060770699.1|3512209_3512938_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_060770700.1|3512968_3515404_-	phosphoketolase family protein	NA	NA	NA	NA	NA
WP_083530873.1|3515545_3515992_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015950075.1|3516246_3516480_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060770701.1|3516737_3517820_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_060770702.1|3518364_3518793_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060770703.1|3518813_3519935_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_144439983.1|3520050_3520422_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083530874.1|3520693_3521125_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060770704.1|3521351_3521885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060770705.1|3523047_3523473_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060770706.1|3523653_3524175_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_060770707.1|3524607_3525582_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_060770709.1|3525864_3526359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060772318.1|3526732_3527575_-	polyphosphate kinase 2	NA	NA	NA	NA	NA
WP_060770710.1|3527616_3530808_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_060772319.1|3530813_3531926_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_144439908.1|3533051_3533994_+|transposase	IS630 family transposase	transposase	A0A2H4UV16	Bodo_saltans_virus	25.4	3.1e-09
WP_083530983.1|3534007_3535129_-|transposase	IS630-like element ISMex18 family transposase	transposase	NA	NA	NA	NA
WP_060772089.1|3535186_3535996_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP006992	Methylobacterium sp. AMS5 chromosome, complete genome	5435450	4700044	4728634	5435450	protease,integrase,transposase	Acidithiobacillus_phage(40.0%)	20	4691509:4691568	4711832:4712082
4691509:4691568	attL	GGCCGGCCGTGCGTGCCGCGATCGCGGCAGCCGGCGCGCGGCTCTTGTTCCTCCCGCCCT	NA	NA	NA	NA
WP_060768287.1|4700044_4700857_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_060771572.1|4701215_4701902_+	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_060771573.1|4702051_4702672_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WF93	Clostridium_phage	26.0	1.9e-07
WP_060771574.1|4702935_4703967_-	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA	NA
WP_060771575.1|4704019_4704541_-	cytochrome P460 family protein	NA	NA	NA	NA	NA
WP_083530991.1|4704524_4705538_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003601680.1|4707424_4708168_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	46.7	2.4e-57
WP_144440023.1|4708179_4709694_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	45.6	7.7e-119
WP_060771579.1|4710172_4711474_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_083530928.1|4712717_4714172_-	hypothetical protein	NA	A0A0B5A5A2	Paracoccus_phage	39.5	5.6e-50
4711832:4712082	attR	GGCCGGCCGTGCGTGCCGCGATCGCGGCAGCCGGCGCGCGGCTCTTGTTCCTCCCGCCCTACTCGCCCGACTTCAACCCCATCGAGATGGCGTTCTCGAAGCTGAAGGCGCTCCTGCGCAAAGCGGCCGAGCGAACCGTCGAGGGATTGTGGTCGGCCATCGGACGCCTCGTCGACACCGTCACGCCAGACGAGTGCGCCAACTTCTTCGCCGCAGCAGGATACGAACCAGATTAAACCGAAAACGCTCTA	NA	NA	NA	NA
WP_060771582.1|4714571_4714877_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144440024.1|4715198_4715480_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060771583.1|4715825_4717283_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083530929.1|4717279_4720369_-	CHAT domain-containing protein	NA	NA	NA	NA	NA
WP_060768523.1|4721804_4722848_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_060771587.1|4723925_4725029_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	46.6	6.0e-73
WP_060771588.1|4725516_4726470_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_060771589.1|4726643_4726892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060771590.1|4726936_4727689_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_060771591.1|4727758_4728634_-|protease	AprI/Inh family metalloprotease inhibitor	protease	NA	NA	NA	NA
>prophage 6
NZ_CP006992	Methylobacterium sp. AMS5 chromosome, complete genome	5435450	4755207	4842346	5435450	protease,integrase,transposase	Agrobacterium_phage(14.29%)	51	4786193:4786221	4843383:4843411
WP_083530932.1|4755207_4755909_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_060771613.1|4756619_4756868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060771614.1|4757489_4759352_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A2L0V0F4	Agrobacterium_phage	35.1	1.0e-40
WP_060771615.1|4759351_4759993_+	radical SAM protein	NA	NA	NA	NA	NA
WP_083530992.1|4760019_4766277_+	DUF4011 domain-containing protein	NA	NA	NA	NA	NA
WP_060771617.1|4766273_4767650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144440029.1|4768184_4769618_+	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_144440030.1|4769633_4771013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_135299846.1|4771316_4771898_-	invasion protein	NA	NA	NA	NA	NA
WP_060771621.1|4771930_4772716_-	SapC family protein	NA	NA	NA	NA	NA
WP_060771622.1|4772764_4783384_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_135300217.1|4783400_4785179_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA	NA
4786193:4786221	attL	TGAGAATCCTGGCGCCCCAGCCAAGCCTC	NA	NA	NA	NA
WP_060771623.1|4786536_4788765_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_144440031.1|4789001_4791776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083530993.1|4791910_4793563_-	long-chain-fatty-acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	27.7	8.0e-29
WP_060771625.1|4793690_4794044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060771626.1|4794055_4794838_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_060771627.1|4794834_4797018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060771628.1|4797020_4798229_-	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA	NA
WP_060771629.1|4798285_4799365_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_060771630.1|4799388_4800510_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060771631.1|4800764_4801871_+	NAD(P)-dependent alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	25.9	5.9e-20
WP_060771632.1|4801930_4803364_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_144440068.1|4803572_4804460_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_158509759.1|4804552_4805266_-	OmpW family protein	NA	NA	NA	NA	NA
WP_060771635.1|4805481_4806609_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_060771636.1|4806608_4807784_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_060771637.1|4808232_4808418_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060771638.1|4808441_4809863_-	exonuclease VII large subunit	NA	NA	NA	NA	NA
WP_144440032.1|4809952_4810705_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060771640.1|4811389_4814860_-	relaxase domain-containing protein	NA	NA	NA	NA	NA
WP_060771641.1|4814868_4815165_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060771642.1|4815441_4816191_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060771643.1|4816195_4817101_-	hypothetical protein	NA	NA	NA	NA	NA
WP_135300042.1|4817097_4817661_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060771646.1|4819822_4820356_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_060771647.1|4821224_4821473_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060771648.1|4822153_4823068_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060771649.1|4823365_4824085_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060771650.1|4824267_4824534_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144440033.1|4824991_4825153_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_060771651.1|4825155_4825896_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA	NA
WP_060771652.1|4826012_4826960_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA	NA
WP_060771653.1|4827002_4827626_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060771654.1|4827707_4833599_-	DEAD/DEAH box helicase	NA	A0A1B1IUF6	uncultured_Mediterranean_phage	29.9	1.4e-06
WP_060771655.1|4833602_4835750_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060771656.1|4835736_4838292_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060771657.1|4838494_4839442_+	DNA (cytosine-5-)-methyltransferase	NA	Q7Y4B5	Escherichia_virus	61.2	6.1e-114
WP_060771658.1|4839492_4839876_+	DNA mismatch endonuclease Vsr	NA	I6NSG0	Burkholderia_phage	50.0	8.0e-33
WP_144440034.1|4840361_4841529_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	37.6	2.7e-39
WP_060771660.1|4841536_4842346_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
4843383:4843411	attR	TGAGAATCCTGGCGCCCCAGCCAAGCCTC	NA	NA	NA	NA
>prophage 1
NZ_CP006993	Methylobacterium sp. AMS5 plasmid pAMS5a, complete sequence	117697	3226	56007	117697	terminase,tail,capsid	Rhizobium_phage(65.71%)	62	NA	NA
WP_060772448.1|3226_4627_-	hypothetical protein	NA	L7TS91	Rhizobium_phage	34.9	1.8e-69
WP_060772449.1|4756_5491_-	hypothetical protein	NA	L7TM18	Rhizobium_phage	32.6	3.6e-13
WP_060772450.1|5490_5769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772451.1|5765_6278_-	WGR domain-containing protein	NA	NA	NA	NA	NA
WP_060772452.1|6364_7510_-	hypothetical protein	NA	L7TNF2	Rhizobium_phage	59.3	1.9e-117
WP_060772453.1|7506_7788_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772454.1|7787_9158_-	hypothetical protein	NA	L7TS87	Rhizobium_phage	50.6	1.0e-117
WP_060772455.1|9162_9444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772456.1|9507_10215_-	hypothetical protein	NA	J9Q7R8	Salmonella_phage	30.5	2.5e-16
WP_083530997.1|10214_11009_-	GIY-YIG nuclease family protein	NA	I7GYA4	Xanthomonas_virus	46.2	2.7e-14
WP_083530998.1|10992_11841_-	PhoH family protein	NA	H6X2N1	Pseudomonas_phage	54.2	1.8e-56
WP_060772458.1|12077_12278_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772459.1|12274_12865_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772460.1|12939_16374_-	hypothetical protein	NA	A0A1B0XUH9	Freshwater_phage	39.9	3.6e-15
WP_060772461.1|16399_17461_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772462.1|17467_17863_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772463.1|17983_18322_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158509766.1|18424_18622_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772465.1|18653_19088_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772466.1|19087_19567_-	lysozyme	NA	A0A0K1Y6F2	Rhodobacter_phage	44.4	4.0e-29
WP_060772467.1|19563_19815_-	hypothetical protein	NA	L7TNZ5	Rhizobium_phage	44.6	6.5e-07
WP_144440071.1|19816_20161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772469.1|20238_20598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772470.1|20594_21029_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772471.1|21040_27709_-	hypothetical protein	NA	L7TND7	Rhizobium_phage	33.3	2.1e-11
WP_060772472.1|27719_28358_-|tail	tail assembly protein	tail	L7TS77	Rhizobium_phage	48.8	4.3e-39
WP_060772473.1|28350_29175_-	C40 family peptidase	NA	L7TLZ5	Rhizobium_phage	46.2	1.8e-61
WP_060772474.1|29174_29879_-|tail	phage minor tail protein L	tail	L7TNY8	Rhizobium_phage	50.2	1.8e-70
WP_060772475.1|29933_30272_-	hypothetical protein	NA	L7TKL1	Rhizobium_phage	40.5	9.6e-14
WP_060772476.1|30280_35137_-	tape measure protein	NA	L7TND1	Rhizobium_phage	26.3	6.3e-90
WP_060772477.1|35147_35393_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772478.1|35461_35824_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772479.1|35910_36429_-	hypothetical protein	NA	A0A2H4P707	Pseudomonas_phage	52.3	4.3e-45
WP_060772480.1|36513_36915_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772481.1|36911_37355_-	hypothetical protein	NA	L7TNC7	Rhizobium_phage	46.1	5.1e-23
WP_060772482.1|37347_37704_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772483.1|37700_38480_-	hypothetical protein	NA	L7TLY6	Rhizobium_phage	39.0	4.5e-38
WP_060772484.1|38476_39277_-	hypothetical protein	NA	L7TNY0	Rhizobium_phage	29.9	3.9e-21
WP_060772485.1|39276_39930_-	hypothetical protein	NA	J9Q7Y3	Salmonella_phage	26.0	2.4e-05
WP_060772486.1|39932_40193_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772487.1|40283_41186_-|capsid	phage capsid protein	capsid	A0A2H4P701	Pseudomonas_phage	57.3	4.6e-87
WP_060772488.1|41309_42170_-	hypothetical protein	NA	J9Q7F4	Salmonella_phage	39.9	2.4e-29
WP_144440072.1|42251_43850_-	hypothetical protein	NA	L7TPB5	Rhizobium_phage	52.2	1.3e-145
WP_060772489.1|43862_44132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772490.1|44191_45457_-|terminase	terminase	terminase	L7TL12	Rhizobium_phage	65.9	1.1e-163
WP_060772491.1|45443_46154_-	hypothetical protein	NA	J9Q6D4	Salmonella_phage	26.4	5.3e-06
WP_060772492.1|46237_46531_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772493.1|46527_47397_-	hypothetical protein	NA	L7TMG5	Rhizobium_phage	62.3	7.8e-100
WP_060772494.1|47636_47924_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772495.1|47920_48385_-	DUF2829 domain-containing protein	NA	S5VZM6	Pseudomonas_phage	51.9	4.9e-16
WP_060772496.1|48381_49023_-	ATP-binding cassette domain-containing protein	NA	L7TNS9	Rhizobium_phage	64.8	7.8e-73
WP_060772497.1|49019_49472_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772498.1|49464_49719_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772499.1|49718_50393_-	ParB N-terminal domain-containing protein	NA	L7TMF9	Rhizobium_phage	40.0	1.9e-37
WP_060772500.1|50376_50595_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772501.1|50587_51286_-	ParB N-terminal domain-containing protein	NA	L7TL04	Rhizobium_phage	47.7	3.1e-51
WP_060772596.1|51350_53045_+	DEAD/DEAH box helicase	NA	L7TNS5	Rhizobium_phage	47.5	1.3e-138
WP_060772502.1|53065_53266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060772503.1|53346_53937_+	hypothetical protein	NA	L7TMF6	Rhizobium_phage	47.6	5.2e-39
WP_060772504.1|54052_54754_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060772505.1|54750_55233_+	hypothetical protein	NA	A9J555	Pseudomonas_phage	39.9	8.3e-19
WP_060772506.1|55326_56007_+	ParA family protein	NA	L7TKZ9	Rhizobium_phage	43.1	4.0e-43
>prophage 2
NZ_CP006993	Methylobacterium sp. AMS5 plasmid pAMS5a, complete sequence	117697	81397	90609	117697		Rhizobium_phage(33.33%)	10	NA	NA
WP_060772550.1|81397_81967_-	3'-5' exonuclease	NA	L7TM81	Rhizobium_phage	53.0	4.8e-42
WP_144440076.1|81966_82686_-	hypothetical protein	NA	A0A141GF36	Brucella_phage	61.7	2.0e-53
WP_060772553.1|82920_84444_-	hypothetical protein	NA	A0A0H5B3B1	Pseudomonas_phage	35.6	3.0e-30
WP_060772554.1|84526_86818_-	ATP-binding protein	NA	L7TNJ4	Rhizobium_phage	45.5	3.5e-67
WP_060772555.1|86923_87526_-	hypothetical protein	NA	NA	NA	NA	NA
WP_083530999.1|87776_88451_-	dUTP diphosphatase	NA	K4JSC8	Caulobacter_phage	55.7	7.8e-31
WP_060772556.1|88447_88732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772557.1|88762_89290_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772558.1|89297_89705_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772559.1|89730_90609_-	hypothetical protein	NA	A0A0B5A4Q6	Achromobacter_phage	47.1	2.2e-65
>prophage 3
NZ_CP006993	Methylobacterium sp. AMS5 plasmid pAMS5a, complete sequence	117697	96214	116598	117697		Rhizobium_phage(92.86%)	24	NA	NA
WP_060772568.1|96214_98155_-	AAA family ATPase	NA	L7TNH6	Rhizobium_phage	46.1	1.2e-140
WP_060772569.1|98151_98343_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772570.1|98342_98735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772571.1|98803_99880_-	hypothetical protein	NA	L7TKQ8	Rhizobium_phage	44.1	4.1e-66
WP_060772572.1|99879_101001_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772573.1|101081_101498_-	hypothetical protein	NA	L7TSA6	Rhizobium_phage	52.5	3.9e-09
WP_060772574.1|101460_101922_-	hypothetical protein	NA	L7TM42	Rhizobium_phage	47.5	3.3e-33
WP_060772575.1|101995_103108_-	hypothetical protein	NA	L7TP19	Rhizobium_phage	55.7	3.5e-105
WP_060772576.1|103120_103636_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772577.1|103632_104664_-	hypothetical protein	NA	L7TSA2	Rhizobium_phage	40.5	7.6e-62
WP_144440077.1|104757_105684_-	hypothetical protein	NA	L7TM37	Rhizobium_phage	37.6	4.3e-40
WP_060772579.1|105956_106508_-	hypothetical protein	NA	L7TKP5	Rhizobium_phage	50.0	2.2e-31
WP_060772580.1|106507_106771_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772581.1|106835_110240_-	DNA polymerase III subunit alpha	NA	L7TNG6	Rhizobium_phage	56.7	0.0e+00
WP_144440078.1|110239_110701_-	hypothetical protein	NA	I6WLM5	Burkholderia_virus	51.0	3.4e-38
WP_060772583.1|110721_111030_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772584.1|111029_111575_-	hypothetical protein	NA	L7TM29	Rhizobium_phage	39.2	2.6e-24
WP_060772585.1|111574_112201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772586.1|112200_113400_-	AAA domain-containing protein	NA	L7TKP0	Rhizobium_phage	48.8	1.9e-104
WP_060772587.1|113557_113764_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772588.1|113763_114012_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772589.1|114008_114209_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060772590.1|114205_115594_-	VWA domain-containing protein	NA	L7TNG1	Rhizobium_phage	44.5	1.1e-71
WP_060772591.1|115593_116598_-	hypothetical protein	NA	L7TNG1	Rhizobium_phage	40.1	1.3e-34
