The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP014159	Aerococcus christensenii strain CCUG28831 chromosome, complete genome	1634920	192030	204783	1634920		Prochlorococcus_phage(25.0%)	12	NA	NA
WP_060776247.1|192030_193329_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	29.9	2.7e-19
WP_060776248.1|193321_194605_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_060776249.1|194614_196165_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	43.9	1.5e-61
WP_060776250.1|196161_196740_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	39.1	2.9e-26
WP_060776251.1|196741_197791_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	42.0	6.0e-62
WP_082632777.1|197771_199313_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.4	3.2e-56
WP_082632779.1|199261_201430_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	38.0	2.4e-134
WP_060776252.1|201500_202178_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_060776253.1|202181_202427_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_060776254.1|202439_203174_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	41.7	1.2e-45
WP_060776255.1|203177_204314_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_060776256.1|204297_204783_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	43.4	2.5e-23
>prophage 2
NZ_CP014159	Aerococcus christensenii strain CCUG28831 chromosome, complete genome	1634920	528327	539517	1634920		Streptococcus_phage(40.0%)	11	NA	NA
WP_060776521.1|528327_529506_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	44.9	4.3e-85
WP_060776522.1|529462_530143_-	VanZ family protein	NA	NA	NA	NA	NA
WP_060776523.1|530139_531600_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	30.5	3.1e-32
WP_060776524.1|531603_532314_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.5	1.4e-30
WP_060776525.1|532446_532806_+	single-stranded DNA-binding protein	NA	A0A0K2CNI9	Brevibacillus_phage	39.3	5.2e-10
WP_060777439.1|532880_533810_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	38.2	3.7e-47
WP_060776526.1|533831_534830_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	49.8	2.0e-83
WP_060776527.1|534826_535756_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.3	7.0e-06
WP_060776528.1|535839_537561_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	52.3	4.3e-166
WP_060776529.1|537682_538630_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	52.7	3.9e-89
WP_060776530.1|538629_539517_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	49.8	2.4e-72
>prophage 3
NZ_CP014159	Aerococcus christensenii strain CCUG28831 chromosome, complete genome	1634920	667637	678552	1634920		Enterococcus_phage(33.33%)	8	NA	NA
WP_060776623.1|667637_670196_-	SH3-like domain-containing protein	NA	Q9ZXE4	Bacillus_phage	39.5	6.4e-17
WP_060776624.1|670481_671396_+	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	50.7	2.6e-77
WP_060777447.1|671466_672042_+	serine acetyltransferase	NA	NA	NA	NA	NA
WP_082632790.1|672503_674783_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	67.3	1.2e-264
WP_060776625.1|674763_675357_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A0C5K925	Enterococcus_phage	60.0	5.2e-55
WP_060776626.1|675464_676865_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_060776627.1|676888_677341_-	SUF system NifU family Fe-S cluster assembly protein	NA	V5R992	Mycobacterium_phage	30.9	7.1e-12
WP_060776628.1|677337_678552_-	SufS family cysteine desulfurase	NA	Q2XUY6	environmental_halophage	41.8	2.6e-93
>prophage 4
NZ_CP014159	Aerococcus christensenii strain CCUG28831 chromosome, complete genome	1634920	1320932	1330070	1634920	capsid,portal	Streptococcus_phage(16.67%)	9	NA	NA
WP_082632730.1|1320932_1322360_+|portal	phage portal protein	portal	A7J292	Streptococcus_phage	61.7	1.2e-145
WP_082632735.1|1322343_1323573_+|capsid	minor capsid protein	capsid	D2IYW4	Enterococcus_phage	56.5	1.0e-89
WP_144428660.1|1323614_1323854_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156407349.1|1323911_1324067_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060777159.1|1324565_1324943_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0C5AN56	Paenibacillus_phage	44.4	3.2e-18
WP_060777160.1|1324999_1325194_-	type II toxin-antitoxin system HicA family toxin	NA	A0A0A7RWW9	Clostridium_phage	49.1	7.7e-08
WP_082632731.1|1325421_1325643_+	HNH endonuclease	NA	A0A1B1IMY5	Lactococcus_phage	69.1	8.2e-22
WP_060777161.1|1326114_1326855_+	3-oxoacyl-ACP reductase FabG	NA	NA	NA	NA	NA
WP_060777162.1|1327355_1330070_-	cation-translocating P-type ATPase	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	28.0	3.5e-74
>prophage 5
NZ_CP014159	Aerococcus christensenii strain CCUG28831 chromosome, complete genome	1634920	1472018	1495989	1634920	integrase	Streptococcus_phage(82.61%)	27	1467495:1467509	1496742:1496756
1467495:1467509	attL	TGAAGAAGGGAGAAG	NA	NA	NA	NA
WP_060777286.1|1472018_1472345_-	heavy metal-binding domain-containing protein	NA	M4STD1	Rhodobacter_phage	39.4	8.7e-12
WP_144428645.1|1472796_1473045_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060777287.1|1473402_1474107_+	YaaA family protein	NA	A0A1X9I5I0	Streptococcus_phage	36.6	1.3e-25
WP_060777288.1|1474197_1474968_-	3-oxoacyl-ACP reductase	NA	A0A0M4JSW6	Mollivirus	31.7	1.4e-07
WP_060777289.1|1474967_1475189_-	DUF2829 domain-containing protein	NA	NA	NA	NA	NA
WP_000420682.1|1475621_1475936_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|1475951_1476338_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|1476366_1477752_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000879507.1|1477754_1477907_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|1477929_1479135_+	replication initiation factor	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|1479177_1479399_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|1479515_1480013_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|1479987_1480494_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|1480477_1482925_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000804748.1|1482927_1485105_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000769868.1|1485101_1486103_+	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224319.1|1486099_1487032_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-171
WP_001791010.1|1487276_1487393_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_000691727.1|1487408_1489328_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	100.0	0.0e+00
WP_000336323.1|1489446_1489614_+	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_001227347.1|1489673_1490027_-	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000804885.1|1490531_1490954_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|1490950_1491181_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000814511.1|1491641_1491845_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|1491926_1493144_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_060777290.1|1493483_1494023_+	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	34.9	1.8e-09
WP_060777291.1|1494189_1495989_+	DNA helicase RecQ	NA	A0A0G2Y0D4	Acanthamoeba_polyphaga_mimivirus	36.1	1.1e-76
1496742:1496756	attR	TGAAGAAGGGAGAAG	NA	NA	NA	NA
>prophage 6
NZ_CP014159	Aerococcus christensenii strain CCUG28831 chromosome, complete genome	1634920	1508958	1517996	1634920		Tupanvirus(16.67%)	10	NA	NA
WP_169790709.1|1508958_1510872_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	28.8	3.5e-52
WP_169790710.1|1510904_1511849_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	59.4	3.0e-113
WP_060777304.1|1511860_1512373_+	dihydrofolate reductase	NA	A0A1B2IDT7	Erwinia_phage	42.3	7.0e-24
WP_060777305.1|1512369_1512954_+	DUF2140 family protein	NA	NA	NA	NA	NA
WP_060777486.1|1512973_1513195_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
WP_082632767.1|1513216_1514761_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	27.4	8.3e-20
WP_060777306.1|1514774_1515320_+	signal peptidase I	NA	NA	NA	NA	NA
WP_060777307.1|1515382_1516255_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_082632766.1|1516256_1517027_+	ribonuclease HII	NA	D2TEQ2	Emiliania_huxleyi_virus	38.3	5.0e-26
WP_060777309.1|1517105_1517996_+	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	38.5	3.8e-25
>prophage 7
NZ_CP014159	Aerococcus christensenii strain CCUG28831 chromosome, complete genome	1634920	1566369	1572685	1634920		Tupanvirus(33.33%)	7	NA	NA
WP_060777352.1|1566369_1566906_-	hypoxanthine phosphoribosyltransferase	NA	A0A2K9L634	Tupanvirus	26.9	1.1e-14
WP_060777353.1|1567041_1567581_-	hypoxanthine phosphoribosyltransferase	NA	A0A2K9L634	Tupanvirus	25.5	2.3e-09
WP_060777354.1|1567720_1568200_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060777491.1|1568196_1569744_-	hypothetical protein	NA	A0A141HRX5	Bacillus_phage	23.6	3.3e-24
WP_060777355.1|1569798_1571004_-	ATP-binding protein	NA	A0A172JHT1	Bacillus_phage	26.7	7.1e-27
WP_060777356.1|1571446_1571995_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	45.2	7.0e-38
WP_060777357.1|1572049_1572685_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	36.3	8.4e-35
