The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP014944	Staphylococcus schleiferi strain TSCC54	2528077	164347	230001	2528077	protease,transposase	Tupanvirus(33.33%)	52	NA	NA
WP_060829194.1|164347_165526_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_060829195.1|165735_166221_+	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA	NA
WP_060829196.1|166294_166897_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_060829197.1|166893_167994_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_060830485.1|167990_168725_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_060829198.1|168724_169591_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.2	1.5e-18
WP_060829199.1|169960_173098_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_060829200.1|173234_174086_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_060829201.1|174190_176149_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_060829202.1|176164_177055_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA	NA
WP_060829203.1|177056_178121_-	DUF871 domain-containing protein	NA	NA	NA	NA	NA
WP_060829204.1|178525_182227_+	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	28.3	1.5e-80
WP_171839456.1|182231_185675_+	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	27.5	7.2e-56
WP_060829206.1|185685_186309_+	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA	NA
WP_060829207.1|186503_186905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060829208.1|187053_187881_+	autolysin	NA	NA	NA	NA	NA
WP_060829209.1|188085_188274_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060829211.1|188862_191658_+	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
WP_060829212.1|191740_192322_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_060829213.1|192323_193880_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	74.2	2.5e-210
WP_060829214.1|193872_195105_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	35.3	1.2e-42
WP_060829215.1|195247_195826_-	DUF2812 domain-containing protein	NA	NA	NA	NA	NA
WP_060829216.1|195812_196139_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_060829217.1|196515_196842_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_103356157.1|197678_198158_-	YagU family protein	NA	NA	NA	NA	NA
WP_060829219.1|198503_199514_+	DUF418 domain-containing protein	NA	NA	NA	NA	NA
WP_060829220.1|199695_201363_-	staphylococcal protein A	NA	NA	NA	NA	NA
WP_060829221.1|202144_202858_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_060829222.1|202876_203818_-	carbamate kinase	NA	NA	NA	NA	NA
WP_060829223.1|203834_205265_-	arginine-ornithine antiporter	NA	NA	NA	NA	NA
WP_060829224.1|205384_206392_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_060829225.1|206427_207663_-	arginine deiminase	NA	NA	NA	NA	NA
WP_060829226.1|208088_208568_+	ArgR family transcriptional regulator	NA	NA	NA	NA	NA
WP_060829227.1|208665_209259_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_060829228.1|209453_211229_+	oleate hydratase	NA	NA	NA	NA	NA
WP_060829229.1|211488_212076_+	DsbA family protein	NA	NA	NA	NA	NA
WP_060829230.1|212501_213269_+|protease	serine protease	protease	NA	NA	NA	NA
WP_060829231.1|213531_214299_+|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_060829232.1|214800_215967_-	FAD-dependent monooxygenase	NA	NA	NA	NA	NA
WP_103356450.1|215977_216511_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_060829233.1|216803_217142_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_060830487.1|217205_218006_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_060829234.1|218573_219545_+	chitosanase	NA	A0A223LI87	Streptomyces_phage	36.9	2.9e-18
WP_060829235.1|219569_220832_+	cellulase family glycosylhydrolase	NA	NA	NA	NA	NA
WP_060829236.1|220944_221679_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_060829237.1|222230_223601_+	MFS transporter	NA	NA	NA	NA	NA
WP_050329883.1|223631_224294_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_060829238.1|224333_225512_+	phosphopentomutase	NA	NA	NA	NA	NA
WP_060829239.1|225676_226588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060829240.1|227045_227774_+|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_060829241.1|227820_228528_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_060829242.1|228681_230001_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_AP014944	Staphylococcus schleiferi strain TSCC54	2528077	915133	944733	2528077	head,transposase,protease,tRNA,integrase,capsid,portal	uncultured_Caudovirales_phage(31.25%)	33	934924:934941	948321:948338
WP_050330452.1|915133_915580_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_060829618.1|915572_916229_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_060830504.1|916252_916678_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_060829619.1|916670_917699_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.3	1.0e-61
WP_060829620.1|918147_920091_-	ABC-F type ribosomal protection protein	NA	A0A2K9L3Z8	Tupanvirus	29.7	1.6e-52
WP_060829621.1|920243_920882_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_050345383.1|921174_922257_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_050330465.1|922281_922506_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_060829622.1|922903_924391_+	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	24.0	1.5e-10
WP_060829242.1|924459_925779_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_050330468.1|925965_926682_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	32.2	6.1e-26
WP_060829623.1|926696_927989_-	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_060829624.1|928015_928150_-	cyclic lactone autoinducer peptide	NA	NA	NA	NA	NA
WP_060829625.1|928152_928719_-	accessory gene regulator AgrB	NA	NA	NA	NA	NA
WP_103356492.1|929125_929203_+	delta-lysin family phenol-soluble modulin	NA	NA	NA	NA	NA
WP_060829626.1|929444_930248_-	carbon-nitrogen family hydrolase	NA	NA	NA	NA	NA
WP_060829627.1|930413_931922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060829628.1|932034_932787_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_016425569.1|932991_933276_+	co-chaperone GroES	NA	A0A221S4A8	uncultured_virus	39.1	2.1e-14
WP_050330477.1|933321_934941_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.0	4.4e-157
934924:934941	attL	ATGCCAGGCATGATGTAA	NA	NA	NA	NA
WP_060829629.1|935056_936229_-|integrase	site-specific integrase	integrase	A0A2H4JBC4	uncultured_Caudovirales_phage	87.5	6.6e-195
WP_060829630.1|936237_936825_-	helix-turn-helix transcriptional regulator	NA	A0A1W6JPB6	Staphylococcus_phage	34.9	5.4e-20
WP_060829631.1|936921_937158_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_060829632.1|937144_937450_+	helix-turn-helix domain-containing protein	NA	A0A2H4JHK0	uncultured_Caudovirales_phage	81.2	3.9e-38
WP_060829633.1|937446_937650_+	hypothetical protein	NA	A0A1W6JQF4	Staphylococcus_phage	73.1	4.0e-23
WP_060829634.1|937652_937859_+	hypothetical protein	NA	A0A1W6JPA6	Staphylococcus_phage	62.1	1.3e-16
WP_060829635.1|937860_938133_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060829636.1|938132_938435_+	DUF1474 family protein	NA	A0A2H4JB50	uncultured_Caudovirales_phage	66.7	2.2e-30
WP_060829637.1|938532_940902_+	DNA primase	NA	A0A2H4JCU9	uncultured_Caudovirales_phage	42.2	2.0e-145
WP_060829638.1|941287_941632_+	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	69.6	4.5e-43
WP_082704434.1|941815_942949_+|portal	phage portal protein	portal	A0A1L2BY94	Clostridium_phage	34.9	3.1e-56
WP_060829640.1|942935_943502_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1B1PA08	Enterococcus_phage	34.9	1.0e-20
WP_060829641.1|943503_944733_+|capsid	phage major capsid protein	capsid	NA	NA	NA	NA
948321:948338	attR	ATGCCAGGCATGATGTAA	NA	NA	NA	NA
>prophage 3
NZ_AP014944	Staphylococcus schleiferi strain TSCC54	2528077	1099938	1123526	2528077		Staphylococcus_phage(90.0%)	26	NA	NA
WP_060829727.1|1099938_1100256_-	DUF4870 domain-containing protein	NA	A0A2H4J741	uncultured_Caudovirales_phage	48.0	5.6e-16
WP_060829728.1|1100549_1101944_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	52.5	1.8e-130
WP_060829729.1|1101940_1102930_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	45.7	2.3e-79
WP_050330616.1|1102905_1103157_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	69.9	3.5e-29
WP_050330617.1|1103214_1103685_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	47.8	8.9e-34
WP_050330618.1|1103665_1104436_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	62.7	1.8e-84
WP_060829730.1|1104566_1106150_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	75.6	2.4e-240
WP_050330620.1|1106697_1107897_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	80.8	3.1e-179
WP_050332160.1|1107986_1108898_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	67.9	2.1e-87
WP_060829731.1|1109487_1110324_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	68.2	7.2e-111
WP_060829732.1|1110463_1110820_-	CrcB family protein	NA	NA	NA	NA	NA
WP_060829733.1|1110816_1111182_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	59.3	1.3e-32
WP_060829734.1|1111218_1111521_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050330625.1|1111676_1112387_+	transaldolase	NA	M1PR54	Cyanophage	37.0	5.0e-20
WP_060829735.1|1112633_1113083_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060829736.1|1113085_1113514_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082704409.1|1113516_1114005_-	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	43.8	3.1e-21
WP_016425399.1|1114209_1114431_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060829737.1|1114587_1115451_+	N-acetylglucosaminidase	NA	A0A1W6JQU5	Staphylococcus_phage	43.9	7.9e-36
WP_103356715.1|1115772_1116660_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_060829739.1|1116885_1118445_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	60.3	3.4e-13
WP_060829740.1|1118984_1120031_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	57.8	1.5e-113
WP_050330632.1|1120035_1120665_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	57.1	1.8e-61
WP_050330633.1|1120679_1121861_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	65.4	1.7e-150
WP_050345483.1|1121879_1122338_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	66.7	1.2e-51
WP_050345484.1|1122542_1123526_-	proline dehydrogenase family protein	NA	A0A2H4PQT6	Staphylococcus_phage	66.9	1.5e-120
>prophage 4
NZ_AP014944	Staphylococcus schleiferi strain TSCC54	2528077	1126736	1135476	2528077	tRNA,transposase	Staphylococcus_phage(85.71%)	8	NA	NA
WP_060829742.1|1126736_1127219_+|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	9.8e-20
WP_060829743.1|1127628_1128039_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_060829744.1|1128089_1128650_-	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	61.1	2.7e-61
WP_050345488.1|1128646_1129600_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	78.5	6.4e-63
WP_060829745.1|1129744_1130926_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	68.7	4.8e-153
WP_060829746.1|1131301_1133713_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	80.5	0.0e+00
WP_060829747.1|1133731_1134043_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	64.1	1.1e-32
WP_060829748.1|1134219_1135476_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	69.5	2.0e-32
>prophage 5
NZ_AP014944	Staphylococcus schleiferi strain TSCC54	2528077	1249827	1261161	2528077	tRNA	uncultured_Mediterranean_phage(57.14%)	8	NA	NA
WP_016425273.1|1249827_1250826_+	Holliday junction branch migration DNA helicase RuvB	NA	E3T4M7	Cafeteria_roenbergensis_virus	27.1	2.6e-06
WP_050345539.1|1250843_1251869_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_060829804.1|1251886_1253026_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.5	2.0e-87
WP_060829805.1|1253042_1253306_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	45.7	3.0e-07
WP_060829806.1|1253444_1255724_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	31.6	6.1e-27
WP_060830513.1|1255832_1258115_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.0	8.4e-69
WP_050330737.1|1258128_1258647_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	48.0	1.2e-26
WP_050330738.1|1258971_1261161_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	36.5	7.7e-11
>prophage 6
NZ_AP014944	Staphylococcus schleiferi strain TSCC54	2528077	1394550	1403546	2528077		uncultured_Mediterranean_phage(33.33%)	9	NA	NA
WP_060829882.1|1394550_1395279_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	30.6	4.8e-10
WP_060829883.1|1395268_1395811_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	32.7	2.3e-09
WP_050330852.1|1395810_1396554_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_050331964.1|1396848_1397574_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	40.9	1.6e-45
WP_060829884.1|1397557_1399300_+	HAMP domain-containing protein	NA	Q8QKV4	Ectocarpus_siliculosus_virus	25.0	4.4e-09
WP_050345599.1|1400011_1400557_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_014613875.1|1400879_1401128_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	53.3	2.3e-17
WP_060829885.1|1401232_1402177_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_060829886.1|1402169_1403546_+	ATP-dependent DNA helicase RecQ	NA	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	34.0	1.9e-55
>prophage 7
NZ_AP014944	Staphylococcus schleiferi strain TSCC54	2528077	1822213	1830633	2528077		Synechococcus_phage(33.33%)	9	NA	NA
WP_060830108.1|1822213_1822780_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.9	1.8e-25
WP_050345828.1|1822776_1823811_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.5	7.7e-62
WP_060830109.1|1823814_1825236_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.5	4.2e-50
WP_060830110.1|1825214_1827404_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.2	1.5e-136
WP_050331381.1|1827396_1828068_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_016424734.1|1828069_1828330_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_060830111.1|1828332_1829034_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	42.1	2.8e-47
WP_060830112.1|1829030_1830164_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_050331384.1|1830150_1830633_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	1.0e-21
>prophage 8
NZ_AP014944	Staphylococcus schleiferi strain TSCC54	2528077	2001632	2045943	2528077	head,plate,protease,terminase,holin,integrase,capsid,tail,portal	Staphylococcus_phage(88.89%)	69	2039688:2039703	2048016:2048031
WP_060830199.1|2001632_2002319_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_060830525.1|2002639_2003038_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060830200.1|2003780_2004536_-	CHAP domain-containing protein	NA	A0A1J0MF88	Staphylococcus_phage	96.0	2.4e-145
WP_060830201.1|2004548_2004803_-|holin	phage holin	holin	A0A1J0MFP5	Staphylococcus_phage	96.4	1.4e-38
WP_060830202.1|2004820_2006710_-	glucosaminidase domain-containing protein	NA	A0A1J0MFI1	Staphylococcus_phage	98.9	0.0e+00
WP_015728845.1|2006832_2007207_-	hypothetical protein	NA	A0A1J0MFD0	Staphylococcus_phage	100.0	1.1e-53
WP_060830203.1|2007239_2008511_-|plate	BppU family phage baseplate upper protein	plate	A0A1J0MFQ3	Staphylococcus_phage	97.9	2.9e-236
WP_060830204.1|2008527_2009571_-	SGNH/GDSL hydrolase family protein	NA	A0A1J0MFI8	Staphylococcus_phage	98.6	1.1e-188
WP_060830205.1|2009582_2010275_-	hypothetical protein	NA	A0A1J0MFH9	Staphylococcus_phage	99.6	2.3e-102
WP_060830206.1|2010278_2011676_-	hypothetical protein	NA	A0A1J0MF94	Staphylococcus_phage	92.3	1.3e-237
WP_060830207.1|2011688_2012621_-|tail	phage tail family protein	tail	A0A1J0MF79	Staphylococcus_phage	99.7	9.0e-179
WP_060830208.1|2012633_2015753_-|tail	phage tail protein	tail	A0A223LI73	Staphylococcus_phage	98.3	1.5e-246
WP_015728838.1|2015769_2016120_-	hypothetical protein	NA	A0A1J0MFN5	Staphylococcus_phage	100.0	3.0e-58
WP_060830209.1|2016149_2016530_-|tail	tail assembly chaperone	tail	A0A1J0MFC0	Staphylococcus_phage	100.0	1.1e-63
WP_015728836.1|2016589_2017243_-|tail	phage major tail protein, TP901-1 family	tail	A0A1J0MG89	Staphylococcus_phage	100.0	1.1e-69
WP_060830210.1|2017260_2017656_-	hypothetical protein	NA	Q4ZE28	Staphylococcus_virus	81.7	1.3e-54
WP_060830211.1|2017665_2018016_-	HK97 gp10 family phage protein	NA	A0A1J0MFN9	Staphylococcus_phage	83.6	1.3e-50
WP_060830212.1|2018005_2018320_-	hypothetical protein	NA	A0A1J0MF86	Staphylococcus_phage	100.0	1.7e-49
WP_060830213.1|2018316_2018649_-|head,tail	phage head-tail connector protein	head,tail	A0A1J0MFR4	Staphylococcus_phage	99.1	4.2e-54
WP_060830214.1|2018660_2019110_-	Ig domain-containing protein	NA	A0A1J0MFM7	Staphylococcus_phage	100.0	1.9e-73
WP_060830215.1|2019199_2020111_-	hypothetical protein	NA	A0A1J0MFM8	Staphylococcus_phage	99.7	1.1e-165
WP_060830216.1|2020128_2020737_-	DUF4355 domain-containing protein	NA	A0A1J0MFB3	Staphylococcus_phage	99.0	1.5e-49
WP_014613564.1|2020888_2021083_-	hypothetical protein	NA	A0A1J0MG79	Staphylococcus_phage	67.2	6.3e-18
WP_060830526.1|2021079_2022432_-|capsid	minor capsid protein	capsid	A0A1J0MF61	Staphylococcus_phage	93.3	3.1e-236
WP_060830217.1|2022424_2023870_-|portal	phage portal protein	portal	A0A1J0MFG2	Staphylococcus_phage	99.2	6.3e-272
WP_110165026.1|2023881_2025159_-|terminase	PBSX family phage terminase large subunit	terminase	A0A2H4IYR5	uncultured_Caudovirales_phage	75.7	1.3e-196
WP_060830219.1|2025151_2025493_-	helix-turn-helix domain-containing protein	NA	A0A2H4IYT3	uncultured_Caudovirales_phage	67.3	4.9e-34
WP_060830220.1|2025522_2026077_-	GIY-YIG nuclease family protein	NA	A1BU52	Staphylococcus_virus	47.7	7.1e-14
WP_037543601.1|2026364_2026790_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1J0MFD1	Staphylococcus_phage	100.0	7.5e-72
WP_154800885.1|2026790_2026934_-	hypothetical protein	NA	A0A1J0MFM4	Staphylococcus_phage	100.0	7.4e-16
WP_060830221.1|2026933_2027101_-	transcriptional regulator	NA	A0A1J0MFF2	Staphylococcus_phage	98.2	3.1e-21
WP_037542749.1|2027116_2027305_-	DUF1381 domain-containing protein	NA	A0A223LFC9	Staphylococcus_phage	100.0	3.6e-26
WP_020219701.1|2027341_2027878_-	dUTP diphosphatase	NA	A0A1P8L6E0	Staphylococcus_phage	76.4	3.1e-75
WP_060830222.1|2027870_2028182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_168250661.1|2028198_2028360_-	hypothetical protein	NA	A0A223LGT8	Staphylococcus_phage	90.6	5.0e-21
WP_015728818.1|2028360_2028618_-	hypothetical protein	NA	A0A1J0MFL3	Staphylococcus_phage	92.9	3.6e-37
WP_060830223.1|2028617_2029016_-	hypothetical protein	NA	A0A1J0MFF1	Staphylococcus_phage	67.4	3.4e-42
WP_082704421.1|2029161_2029389_-	hypothetical protein	NA	A0A1J0MFY5	Staphylococcus_phage	86.8	4.8e-25
WP_060830225.1|2029369_2030047_-	N-6 DNA methylase	NA	B7T0H3	Staphylococcus_virus	70.1	2.0e-87
WP_060830226.1|2030043_2030529_-	DUF3310 domain-containing protein	NA	A0A223LGV5	Staphylococcus_phage	75.2	2.4e-66
WP_168295458.1|2030766_2030928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037543623.1|2030924_2031233_-	hypothetical protein	NA	A0A223LH51	Staphylococcus_phage	100.0	4.8e-52
WP_060830228.1|2031243_2031462_-	hypothetical protein	NA	A0A1J0MFE4	Staphylococcus_phage	98.6	1.0e-32
WP_060830527.1|2031454_2031829_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A1J0MFP7	Staphylococcus_phage	97.6	4.6e-65
WP_060830229.1|2031886_2032066_-	hypothetical protein	NA	A0A1J0MFQ5	Staphylococcus_phage	94.9	8.3e-25
WP_060830230.1|2032059_2032833_-	ATP-binding protein	NA	A0A1J0MFK2	Staphylococcus_phage	98.4	8.1e-141
WP_060830231.1|2032842_2033580_-	conserved phage C-terminal domain-containing protein	NA	Q6R839	Staphylococcus_virus	72.1	1.9e-83
WP_060830232.1|2033654_2033933_+	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	87.0	1.6e-43
WP_168295453.1|2033929_2034079_-	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	64.6	1.3e-07
WP_060830233.1|2034071_2034746_-	hypothetical protein	NA	A0A1J0MFS2	Staphylococcus_phage	89.7	1.2e-116
WP_015728805.1|2034929_2035367_-	single-stranded DNA-binding protein	NA	A0A1J0MFL8	Staphylococcus_phage	98.6	2.4e-73
WP_060830235.1|2035366_2036035_-	ERF family protein	NA	A0A1J0MFT8	Staphylococcus_phage	99.5	1.5e-119
WP_060830236.1|2036035_2036521_-	siphovirus Gp157 family protein	NA	A0A223LGF3	Staphylococcus_phage	98.1	5.0e-80
WP_060830237.1|2036504_2036729_-	hypothetical protein	NA	A0A223LFR3	Staphylococcus_phage	98.6	3.4e-31
WP_060830238.1|2036740_2037001_-	DUF1108 family protein	NA	A0A1J0MFJ8	Staphylococcus_phage	95.3	2.3e-39
WP_015728800.1|2037246_2037471_-	hypothetical protein	NA	A0A1J0MG48	Staphylococcus_phage	100.0	6.1e-33
WP_060830239.1|2037467_2038211_-	ORF6C domain-containing protein	NA	A0A223LFP5	Staphylococcus_phage	99.6	3.4e-136
WP_060830240.1|2038288_2038516_+	hypothetical protein	NA	A0A223LIF2	Staphylococcus_phage	100.0	1.9e-34
WP_015728797.1|2038512_2038680_-	hypothetical protein	NA	A0A1J0MFJ7	Staphylococcus_phage	100.0	1.5e-23
WP_015728794.1|2038788_2039058_-	helix-turn-helix transcriptional regulator	NA	H9A0Y0	Staphylococcus_phage	93.3	1.5e-38
WP_060830241.1|2039191_2039896_+	helix-turn-helix transcriptional regulator	NA	A0A1J0MFC5	Staphylococcus_phage	73.1	4.1e-91
2039688:2039703	attL	TTGAAGATAAAGAGAT	NA	NA	NA	NA
WP_060830528.1|2040191_2040455_+	hypothetical protein	NA	A0A1W6JQ94	Staphylococcus_phage	65.5	8.0e-24
WP_037543680.1|2040502_2040940_+	DUF4231 domain-containing protein	NA	A0A1J0MFR0	Staphylococcus_phage	100.0	4.3e-75
WP_037543682.1|2040933_2041341_+	TIR domain-containing protein	NA	A0A1J0MFJ5	Staphylococcus_phage	100.0	3.4e-74
WP_037543684.1|2041337_2041535_-	hypothetical protein	NA	A0A1J0MFE5	Staphylococcus_phage	100.0	4.3e-30
WP_060830242.1|2041650_2042700_+|integrase	site-specific integrase	integrase	A0A1J0MF14	Staphylococcus_phage	100.0	2.2e-202
WP_016424582.1|2042767_2044165_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_050331554.1|2044262_2044712_-	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_060830243.1|2044701_2045943_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	48.0	2.0e-117
2048016:2048031	attR	ATCTCTTTATCTTCAA	NA	NA	NA	NA
>prophage 9
NZ_AP014944	Staphylococcus schleiferi strain TSCC54	2528077	2121381	2131003	2528077		uncultured_Caudovirales_phage(33.33%)	7	NA	NA
WP_050331610.1|2121381_2123487_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	87.0	0.0e+00
WP_050345966.1|2123449_2123848_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	64.4	3.6e-44
WP_060830276.1|2124471_2125359_+	DMT family transporter	NA	NA	NA	NA	NA
WP_050331613.1|2125375_2125876_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.7	4.1e-53
WP_060830277.1|2126194_2127700_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	34.4	1.6e-68
WP_050331615.1|2128381_2129884_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	33.8	5.3e-64
WP_060830278.1|2130073_2131003_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	25.5	7.7e-13
