assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001563225.1_ASM156322v1	NZ_CP014206	Pseudodesulfovibrio indicus strain J2 chromosome, complete genome	1	232877-232977	1	CRISPRCasFinder	no	cas3	cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	Unclear	GGAGCGACTTGGGGCGCAGCCCCAACAGCGGCT	33	1	2	232910-232944|232910-232944	NZ_CP014206.1_121886-121852|NZ_CP014206.1_1032836-1032870	NA	1	1	Unclear	cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	NA,NA	NA|601aa|up_9|NZ_CP014206.1_216823_218626_+	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3	NA|261aa|up_8|NZ_CP014206.1_219073_219856_-	sd00010, SLR, Sel1-like repeat	NA|380aa|up_7|NZ_CP014206.1_219953_221093_-	cd06180, MFS_YjiJ, Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters	NA|200aa|up_6|NZ_CP014206.1_221367_221967_+	pfam01965, DJ-1_PfpI, DJ-1/PfpI family	cas3|966aa|up_5|NZ_CP014206.1_222036_224934_-	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|388aa|up_4|NZ_CP014206.1_225313_226477_-	pfam13535, ATP-grasp_4, ATP-grasp domain	NA|460aa|up_3|NZ_CP014206.1_226477_227857_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|194aa|up_2|NZ_CP014206.1_228000_228582_+	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase	NA|255aa|up_1|NZ_CP014206.1_228569_229334_+	pfam02578, Cu-oxidase_4, Multi-copper polyphenol oxidoreductase laccase	NA|463aa|up_0|NZ_CP014206.1_229574_230963_+	smart00729, Elp3, Elongator protein 3, MiaB family, Radical SAM	NA|141aa|down_0|NZ_CP014206.1_233517_233940_+	PRK10203, PRK10203, hypothetical protein; Provisional	NA|303aa|down_1|NZ_CP014206.1_233943_234852_+	PRK00089, era, GTPase Era; Reviewed	NA|831aa|down_2|NZ_CP014206.1_234911_237404_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|86aa|down_3|NZ_CP014206.1_237473_237731_-	cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands	NA|98aa|down_4|NZ_CP014206.1_237750_238044_-	cd10148, CsoR-like_DUF156, Transcriptional regulators CsoR (copper-sensitive operon repressor), RcnR, and FrmR, and related domains; this domain superfamily was previously known as DUF156	NA|149aa|down_5|NZ_CP014206.1_238315_238762_+	pfam02613, Nitrate_red_del, Nitrate reductase delta subunit	NA|179aa|down_6|NZ_CP014206.1_238758_239295_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|123aa|down_7|NZ_CP014206.1_239400_239769_-	pfam00581, Rhodanese, Rhodanese-like domain	NA|367aa|down_8|NZ_CP014206.1_239833_240934_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|243aa|down_9|NZ_CP014206.1_240993_241722_-	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit
GCF_001563225.1_ASM156322v1	NZ_CP014206	Pseudodesulfovibrio indicus strain J2 chromosome, complete genome	2	913288-913394	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	Orphan	TTTGCCCTCAAAGGTGCTCCAGGGGG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	NA,NA|143aa|down_0|NZ_CP014206.1_913697_914126_+,NA|158aa|down_7|NZ_CP014206.1_921330_921804_-	NA|894aa|up_9|NZ_CP014206.1_898482_901164_+	pfam01584, CheW, CheW-like domain	NA|281aa|up_8|NZ_CP014206.1_901102_901945_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|199aa|up_7|NZ_CP014206.1_902024_902621_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|429aa|up_6|NZ_CP014206.1_902884_904171_-	PRK04149, sat, sulfate adenylyltransferase; Reviewed	NA|167aa|up_5|NZ_CP014206.1_904782_905283_+	TIGR02060, adenylylsulfate_reductase_beta_subunit, adenosine phosphosulphate reductase, beta subunit	NA|666aa|up_4|NZ_CP014206.1_905348_907346_+	PRK06854, PRK06854, adenylyl-sulfate reductase subunit alpha	NA|412aa|up_3|NZ_CP014206.1_907509_908745_+	COG1148, HdrA, Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion]	NA|761aa|up_2|NZ_CP014206.1_908748_911031_+	COG1148, HdrA, Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion]	NA|424aa|up_1|NZ_CP014206.1_911041_912313_+	TIGR03290, CoB_CoM_SS_C, CoB--CoM heterodisulfide reductase, subunit C	NA|217aa|up_0|NZ_CP014206.1_912364_913015_+	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type	NA|143aa|down_0|NZ_CP014206.1_913697_914126_+	NA	NA|252aa|down_1|NZ_CP014206.1_914404_915160_-	cd05346, SDR_c5, classical (c) SDR, subgroup 5	NA|252aa|down_2|NZ_CP014206.1_915506_916262_+	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|384aa|down_3|NZ_CP014206.1_916302_917454_+	cd06342, PBP1_ABC_LIVBP-like, type 1 periplasmic ligand-binding domain of ABC (Atpase Binding Cassette)-type active transport systems involved in the transport of all three branched chain aliphatic amino acids (leucine, isoleucine and valine)	NA|303aa|down_4|NZ_CP014206.1_917515_918424_+	COG0559, LivH, Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism]	NA|397aa|down_5|NZ_CP014206.1_918404_919595_+	PRK11301, livM, leucine/isoleucine/valine transporter permease subunit; Provisional	NA|241aa|down_6|NZ_CP014206.1_919896_920619_+	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|158aa|down_7|NZ_CP014206.1_921330_921804_-	NA	NA|147aa|down_8|NZ_CP014206.1_922077_922518_+	pfam00582, Usp, Universal stress protein family	NA|367aa|down_9|NZ_CP014206.1_922598_923699_+	PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated
GCF_001563225.1_ASM156322v1	NZ_CP014206	Pseudodesulfovibrio indicus strain J2 chromosome, complete genome	3	1446984-1447305	1	CRT	no	csa3	cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	Type I-A	CGCTGTTTGAGGCTGCGCCTCAAAGGCGCTCCA	33	0	0	NA	NA	NA	4	4	Orphan	cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	NA|149aa|up_9|NZ_CP014206.1_1436867_1437314_+,NA|262aa|down_4|NZ_CP014206.1_1453320_1454106_+,NA|69aa|down_6|NZ_CP014206.1_1454516_1454723_+,NA|582aa|down_9|NZ_CP014206.1_1457314_1459060_+	NA|149aa|up_9|NZ_CP014206.1_1436867_1437314_+	NA	NA|82aa|up_8|NZ_CP014206.1_1439321_1439567_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|352aa|up_7|NZ_CP014206.1_1439606_1440662_+	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|117aa|up_6|NZ_CP014206.1_1440961_1441312_-	pfam10186, Atg14, Vacuolar sorting 38 and autophagy-related subunit 14	NA|161aa|up_5|NZ_CP014206.1_1441351_1441834_-	pfam05258, DUF721, Protein of unknown function (DUF721)	NA|141aa|up_4|NZ_CP014206.1_1441836_1442259_-	pfam08308, PEGA, PEGA domain	NA|297aa|up_3|NZ_CP014206.1_1442267_1443158_-	pfam00582, Usp, Universal stress protein family	NA|274aa|up_2|NZ_CP014206.1_1443335_1444157_-	pfam08308, PEGA, PEGA domain	csa3|304aa|up_1|NZ_CP014206.1_1444331_1445243_+	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]	NA|477aa|up_0|NZ_CP014206.1_1445270_1446701_+	pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase	NA|418aa|down_0|NZ_CP014206.1_1448353_1449607_-	cd00887, MoeA, MoeA family	NA|292aa|down_1|NZ_CP014206.1_1449615_1450491_-	PRK00942, PRK00942, acetylglutamate kinase; Provisional	NA|398aa|down_2|NZ_CP014206.1_1450822_1452016_+	pfam16983, MFS_MOT1, Molybdate transporter of MFS superfamily	NA|284aa|down_3|NZ_CP014206.1_1452110_1452962_+	cd04255, AAK_UMPK-MosAB, AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis	NA|262aa|down_4|NZ_CP014206.1_1453320_1454106_+	NA	NA|115aa|down_5|NZ_CP014206.1_1454080_1454425_-	TIGR02719, transcriptional_regulator_PadR_family, poly-beta-hydroxybutyrate-responsive repressor	NA|69aa|down_6|NZ_CP014206.1_1454516_1454723_+	NA	NA|388aa|down_7|NZ_CP014206.1_1454793_1455957_-	cd17474, MFS_YfmO_like, Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily	NA|387aa|down_8|NZ_CP014206.1_1455956_1457117_-	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|582aa|down_9|NZ_CP014206.1_1457314_1459060_+	NA
GCF_001563225.1_ASM156322v1	NZ_CP014206	Pseudodesulfovibrio indicus strain J2 chromosome, complete genome	4	2299919-2300018	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	Orphan	GACAAGCTGGTCATCGCCAAGCAGGCCGCGGACCTGC	37	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	NA,NA|102aa|down_7|NZ_CP014206.1_2308667_2308973_+,NA|113aa|down_9|NZ_CP014206.1_2311603_2311942_-	NA|113aa|up_9|NZ_CP014206.1_2287669_2288008_-	COG0393, COG0393, Uncharacterized conserved protein [Function unknown]	NA|172aa|up_8|NZ_CP014206.1_2288146_2288662_-	TIGR01926, peroxid_rel, uncharacterized peroxidase-related enzyme	NA|193aa|up_7|NZ_CP014206.1_2288741_2289320_-	pfam16925, TetR_C_13, Bacterial transcriptional repressor C-terminal	NA|901aa|up_6|NZ_CP014206.1_2289657_2292360_-	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|217aa|up_5|NZ_CP014206.1_2292749_2293400_+	cd00581, QFR_TypeB_TM, Quinol:fumarate reductase (QFR) Type B subfamily, transmembrane subunit;  QFR couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, the opposite reaction to that catalyzed by the related protein, succinate:quinone oxidoreductase (SQR)	NA|612aa|up_4|NZ_CP014206.1_2293413_2295249_+	PRK08626, PRK08626, fumarate reductase flavoprotein subunit; Provisional	NA|246aa|up_3|NZ_CP014206.1_2295252_2295990_+	PRK13552, frdB, fumarate reductase iron-sulfur subunit; Provisional	NA|280aa|up_2|NZ_CP014206.1_2296278_2297118_+	PRK06246, PRK06246, fumarate hydratase; Provisional	NA|184aa|up_1|NZ_CP014206.1_2297117_2297669_+	PRK06842, PRK06842, Fe-S-containing hydro-lyase	NA|254aa|up_0|NZ_CP014206.1_2298023_2298785_-	COG0834, HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms]	NA|570aa|down_0|NZ_CP014206.1_2300455_2302165_+	TIGR03385, Coenzyme_A_disulfide_reductase, CoA-disulfide reductase	NA|130aa|down_1|NZ_CP014206.1_2302178_2302568_+	cd17546, REC_hyHK_CKI1_RcsC-like, phosphoacceptor receiver (REC) domain of hybrid sensor histidine kinases/response regulators similar to Arabidopsis thaliana CKI1 and Escherichia coli RcsC	NA|336aa|down_2|NZ_CP014206.1_2302652_2303660_-	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional	NA|324aa|down_3|NZ_CP014206.1_2303662_2304634_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|306aa|down_4|NZ_CP014206.1_2304637_2305555_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|326aa|down_5|NZ_CP014206.1_2305556_2306534_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|down_6|NZ_CP014206.1_2306701_2308327_-	cd08498, PBP2_NikA_DppA_OppA_like_2, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|102aa|down_7|NZ_CP014206.1_2308667_2308973_+	NA	NA|849aa|down_8|NZ_CP014206.1_2308969_2311516_-	TIGR03960, radical_SAM_domain_protein, radical SAM family uncharacterized protein	NA|113aa|down_9|NZ_CP014206.1_2311603_2311942_-	NA
GCF_001563225.1_ASM156322v1	NZ_CP014206	Pseudodesulfovibrio indicus strain J2 chromosome, complete genome	5	2605111-2605183	4	CRISPRCasFinder	no		cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	Orphan	TAGCTGTCGGTCAGGGAGGTCGGC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	NA|218aa|up_1|NZ_CP014206.1_2603492_2604146_-,NA|96aa|down_6|NZ_CP014206.1_2613282_2613570_-	NA|294aa|up_9|NZ_CP014206.1_2597030_2597912_+	PRK05416, PRK05416, RNase adapter RapZ	NA|146aa|up_8|NZ_CP014206.1_2597914_2598352_+	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|155aa|up_7|NZ_CP014206.1_2598362_2598827_+	pfam03830, PTSIIB_sorb, PTS system sorbose subfamily IIB component	NA|225aa|up_6|NZ_CP014206.1_2598855_2599530_+	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]	NA|307aa|up_5|NZ_CP014206.1_2599624_2600545_+	PRK05427, PRK05427, putative manganese-dependent inorganic pyrophosphatase; Provisional	NA|391aa|up_4|NZ_CP014206.1_2600629_2601802_-	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]	NA|141aa|up_3|NZ_CP014206.1_2602059_2602482_+	TIGR04044, MSMEG_0572_fam, MSMEG_0572 family protein	NA|294aa|up_2|NZ_CP014206.1_2602562_2603444_-	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|218aa|up_1|NZ_CP014206.1_2603492_2604146_-	NA	NA|92aa|up_0|NZ_CP014206.1_2604357_2604633_-	cd13836, IHF_B, Beta subunit of integration host factor (IHFB)	NA|283aa|down_0|NZ_CP014206.1_2605641_2606490_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|361aa|down_1|NZ_CP014206.1_2606467_2607550_-	PRK00578, prfB, peptide chain release factor 2; Validated	NA|506aa|down_2|NZ_CP014206.1_2607586_2609104_-	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed	NA|274aa|down_3|NZ_CP014206.1_2609107_2609929_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|628aa|down_4|NZ_CP014206.1_2610059_2611943_-	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|408aa|down_5|NZ_CP014206.1_2611956_2613180_-	PRK13983, PRK13983, M20 family metallo-hydrolase	NA|96aa|down_6|NZ_CP014206.1_2613282_2613570_-	NA	NA|453aa|down_7|NZ_CP014206.1_2613682_2615041_-	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases	NA|250aa|down_8|NZ_CP014206.1_2615044_2615794_-	cd09010, MTAP_SsMTAPII_like_MTIP, 5'-deoxy-5'-methylthioadenosine phosphorylases (MTAP) similar to Sulfolobus solfataricus MTAPII and Pseudomonas aeruginosa PAO1 5'-methylthioinosine phosphorylase (MTIP)	NA|174aa|down_9|NZ_CP014206.1_2615806_2616328_-	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional
GCF_001563225.1_ASM156322v1	NZ_CP014206	Pseudodesulfovibrio indicus strain J2 chromosome, complete genome	6	3050547-3050644	5	CRISPRCasFinder	no		cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	Orphan	AGGGCGTGCTGGGCATCGGGGCGGCGACAAGGCC	34	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	NA,NA|63aa|down_1|NZ_CP014206.1_3051671_3051860_-,NA|95aa|down_2|NZ_CP014206.1_3051997_3052282_+	NA|247aa|up_9|NZ_CP014206.1_3038820_3039561_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|269aa|up_8|NZ_CP014206.1_3039671_3040478_-	cd13689, PBP2_BsGlnH, Substrate binding domain of ABC glutamine transporter from Bacillus subtilis; the type 2 periplasmic-bindig protein fold	NA|243aa|up_7|NZ_CP014206.1_3040516_3041245_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|352aa|up_6|NZ_CP014206.1_3041562_3042618_-	cd13568, PBP2_TAXI_TRAP_like_3, Substrate binding domain of putative TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold	NA|409aa|up_5|NZ_CP014206.1_3042926_3044153_-	COG5557, COG5557, Polysulphide reductase [Energy production and conversion]	NA|287aa|up_4|NZ_CP014206.1_3044165_3045026_-	cd10551, PsrB, polysulfide reductase beta (PsrB) subunit	NA|649aa|up_3|NZ_CP014206.1_3044989_3046936_-	cd02764, MopB_PHLH, The MopB_PHLH CD includes a group of related uncharacterized putative hydrogenase-like homologs (PHLH) of molybdopterin binding (MopB) proteins	NA|250aa|up_2|NZ_CP014206.1_3046949_3047699_-	cd08168, Cytochrom_C3, Heme-binding domain of the class III cytochrome C family and related proteins	NA|477aa|up_1|NZ_CP014206.1_3047869_3049300_-	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA|190aa|up_0|NZ_CP014206.1_3049304_3049874_-	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase	NA|269aa|down_0|NZ_CP014206.1_3050689_3051496_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|63aa|down_1|NZ_CP014206.1_3051671_3051860_-	NA	NA|95aa|down_2|NZ_CP014206.1_3051997_3052282_+	NA	NA|364aa|down_3|NZ_CP014206.1_3052450_3053542_+	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase	NA|272aa|down_4|NZ_CP014206.1_3053552_3054368_+	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine	NA|898aa|down_5|NZ_CP014206.1_3054449_3057143_-	cd02766, MopB_3, The MopB_3 CD includes a group of related uncharacterized bacterial and archaeal molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site	NA|318aa|down_6|NZ_CP014206.1_3057148_3058102_-	TIGR04347, pseudo_SAM_Halo, pseudo-rSAM protein/SPASM domain protein	NA|374aa|down_7|NZ_CP014206.1_3058098_3059220_-	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]	NA|371aa|down_8|NZ_CP014206.1_3059219_3060332_-	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]	NA|287aa|down_9|NZ_CP014206.1_3060328_3061189_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]
GCF_001563225.1_ASM156322v1	NZ_CP014206	Pseudodesulfovibrio indicus strain J2 chromosome, complete genome	7	3136489-3136596	6	CRISPRCasFinder	no		cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	Orphan	GCAGGAAAGCCGCTGTTTGAGGCTGCGCCTCAAAAGC	37	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	NA|162aa|up_4|NZ_CP014206.1_3130822_3131308_-,NA|174aa|up_3|NZ_CP014206.1_3131674_3132196_-,NA|174aa|up_1|NZ_CP014206.1_3134250_3134772_+,NA|156aa|down_0|NZ_CP014206.1_3136707_3137175_-,NA|157aa|down_1|NZ_CP014206.1_3137239_3137710_-	NA|445aa|up_9|NZ_CP014206.1_3125648_3126983_+	PRK00451, PRK00451, aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA|481aa|up_8|NZ_CP014206.1_3126979_3128422_+	PRK04366, PRK04366, aminomethyl-transferring glycine dehydrogenase subunit GcvPB	NA|455aa|up_7|NZ_CP014206.1_3128411_3129776_+	COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]	NA|148aa|up_6|NZ_CP014206.1_3129772_3130216_+	pfam04074, DUF386, Domain of unknown function (DUF386)	NA|129aa|up_5|NZ_CP014206.1_3130376_3130763_+	cd01521, RHOD_PspE2, Member of the Rhodanese Homology Domain superfamily	NA|162aa|up_4|NZ_CP014206.1_3130822_3131308_-	NA	NA|174aa|up_3|NZ_CP014206.1_3131674_3132196_-	NA	NA|588aa|up_2|NZ_CP014206.1_3132286_3134050_-	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel	NA|174aa|up_1|NZ_CP014206.1_3134250_3134772_+	NA	NA|439aa|up_0|NZ_CP014206.1_3134775_3136092_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|156aa|down_0|NZ_CP014206.1_3136707_3137175_-	NA	NA|157aa|down_1|NZ_CP014206.1_3137239_3137710_-	NA	NA|552aa|down_2|NZ_CP014206.1_3137789_3139445_-	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	NA|241aa|down_3|NZ_CP014206.1_3139450_3140173_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|687aa|down_4|NZ_CP014206.1_3140443_3142504_-	PRK12740, PRK12740, elongation factor G-like protein EF-G2	NA|321aa|down_5|NZ_CP014206.1_3142769_3143732_+	cd16405, RepB_like_N, plasmid segregation replication protein B like protein, N-terminal domain	NA|370aa|down_6|NZ_CP014206.1_3143724_3144834_+	TIGR04070, photo_TT_lyase, spore photoproduct lyase	NA|220aa|down_7|NZ_CP014206.1_3144861_3145521_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|267aa|down_8|NZ_CP014206.1_3145714_3146515_+	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|270aa|down_9|NZ_CP014206.1_3146514_3147324_+	PRK09377, tsf, elongation factor Ts; Provisional
GCF_001563225.1_ASM156322v1	NZ_CP014206	Pseudodesulfovibrio indicus strain J2 chromosome, complete genome	8	3502906-3504198	7,1,2	CRISPRCasFinder,PILER-CR,CRT	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	Type I-U,Type I-C, Type I-U?	GTTTCAATCCACGCCCCCGGGTGGGGGGCGAC,TTTCAATCCACGCCCCCGGGTGGGGGGCGAC,TTTCAATCCACGCCCCCGGGTGGGGGGCGAC	32,31,31	0	0	NA	NA	I-C:I-C:I-C	19,19,19	19	TypeI-U,TypeI-C,TypeI-U?	cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	NA|124aa|up_6|NZ_CP014206.1_3492239_3492611_-,NA|125aa|up_3|NZ_CP014206.1_3495836_3496211_+,NA|173aa|up_0|NZ_CP014206.1_3502028_3502547_+,NA	NA|480aa|up_9|NZ_CP014206.1_3488431_3489871_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|66aa|up_8|NZ_CP014206.1_3489858_3490056_+	COG1942, COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog [General function prediction only]	NA|702aa|up_7|NZ_CP014206.1_3490057_3492163_-	TIGR02717, Uncharacterized_protein_MJ0590, acetyl coenzyme A synthetase (ADP forming), alpha domain	NA|124aa|up_6|NZ_CP014206.1_3492239_3492611_-	NA	NA|760aa|up_5|NZ_CP014206.1_3492657_3494937_-	PRK11465, PRK11465, putative mechanosensitive channel protein; Provisional	NA|239aa|up_4|NZ_CP014206.1_3495008_3495725_-	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	NA|125aa|up_3|NZ_CP014206.1_3495836_3496211_+	NA	NA|666aa|up_2|NZ_CP014206.1_3496270_3498268_+	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|1109aa|up_1|NZ_CP014206.1_3498272_3501599_-	pfam08269, dCache_2, Cache domain	NA|173aa|up_0|NZ_CP014206.1_3502028_3502547_+	NA	cas2|98aa|down_0|NZ_CP014206.1_3504374_3504668_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|344aa|down_1|NZ_CP014206.1_3504671_3505703_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|203aa|down_2|NZ_CP014206.1_3505702_3506311_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|292aa|down_3|NZ_CP014206.1_3506313_3507189_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8c|580aa|down_4|NZ_CP014206.1_3507192_3508932_-	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas5|220aa|down_5|NZ_CP014206.1_3508928_3509588_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|734aa|down_6|NZ_CP014206.1_3509613_3511815_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	NA|215aa|down_7|NZ_CP014206.1_3512403_3513048_-	PRK01362, PRK01362, fructose-6-phosphate aldolase	NA|231aa|down_8|NZ_CP014206.1_3513135_3513828_-	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|559aa|down_9|NZ_CP014206.1_3513831_3515508_-	PRK04123, PRK04123, ribulokinase; Provisional
GCF_001563225.1_ASM156322v1	NZ_CP014206	Pseudodesulfovibrio indicus strain J2 chromosome, complete genome	9	3932070-3932179	8	CRISPRCasFinder	no		cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	Orphan	ATGAAAGCCGCTGTTGGGGCTGCGCCCCAAGGCGCTCCAGGG	42	1	5	3932112-3932137|3932112-3932137|3932112-3932137|3932112-3932137|3932112-3932137	NZ_CP014206.1_1032866-1032841|NZ_CP014206.1_121856-121881|NZ_CP014206.1_255059-255084|NZ_CP014206.1_259929-259954|NZ_CP014206.1_1217148-1217173	NA	1	1	Orphan	cas3,csa3,DEDDh,cas2,cas1,cas4,cas7,cas8c,cas5,TnsE_C	NA|206aa|up_8|NZ_CP014206.1_3922825_3923443_+,NA|119aa|up_6|NZ_CP014206.1_3924215_3924572_-,NA|85aa|up_0|NZ_CP014206.1_3931111_3931366_+,NA|79aa|down_7|NZ_CP014206.1_3941713_3941950_-	NA|354aa|up_9|NZ_CP014206.1_3921659_3922721_+	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases	NA|206aa|up_8|NZ_CP014206.1_3922825_3923443_+	NA	NA|165aa|up_7|NZ_CP014206.1_3923543_3924038_-	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|119aa|up_6|NZ_CP014206.1_3924215_3924572_-	NA	NA|377aa|up_5|NZ_CP014206.1_3924574_3925705_-	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|464aa|up_4|NZ_CP014206.1_3925777_3927169_-	PRK01077, PRK01077, cobyrinate a,c-diamide synthase	NA|83aa|up_3|NZ_CP014206.1_3927257_3927506_-	pfam08679, DsrD, Dissimilatory sulfite reductase D (DsrD)	NA|382aa|up_2|NZ_CP014206.1_3927576_3928722_-	TIGR02066, Sulfite_reductase_dissimilatory-type_subunit_beta, sulfite reductase, dissimilatory-type beta subunit	NA|439aa|up_1|NZ_CP014206.1_3928740_3930057_-	TIGR02064, Sulfite_reductase_dissimilatory-type_subunit_alpha, sulfite reductase, dissimilatory-type alpha subunit	NA|85aa|up_0|NZ_CP014206.1_3931111_3931366_+	NA	NA|144aa|down_0|NZ_CP014206.1_3932656_3933088_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|304aa|down_1|NZ_CP014206.1_3933097_3934009_-	cd01018, ZntC, Metal binding protein ZntC	NA|164aa|down_2|NZ_CP014206.1_3934206_3934698_-	pfam03928, Haem_degrading, Haem-degrading	NA|296aa|down_3|NZ_CP014206.1_3935040_3935928_+	pfam13480, Acetyltransf_6, Acetyltransferase (GNAT) domain	NA|715aa|down_4|NZ_CP014206.1_3936045_3938190_+	PRK09776, PRK09776, putative diguanylate cyclase; Provisional	NA|430aa|down_5|NZ_CP014206.1_3938220_3939510_-	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|214aa|down_6|NZ_CP014206.1_3939601_3940243_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|79aa|down_7|NZ_CP014206.1_3941713_3941950_-	NA	NA|459aa|down_8|NZ_CP014206.1_3941946_3943323_-	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|407aa|down_9|NZ_CP014206.1_3944384_3945605_+	COG3177, COG3177, Fic family protein [Function unknown]
