assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001581875.1_ASM158187v1	NZ_CP014644	Lysinibacillus sphaericus strain OT4b.25 plasmid unnamed, complete sequence	1	40165-40460	1,1,1	CRT,PILER-CR,CRISPRCasFinder	no	RT,cas7,cas8c,cas5	RT,cas7,cas8c,cas5	Type I-U,Type I-C, Type I-U?	ATTTCAATCCACGCTCCCCNTAAGGAGAGCGAC,ATTTCAATCCACGCTCCCCTAAGGAGAGCGAC,ATTTCAATCCACGCTCCCCTAAGGAGAGCGAC	33,32,32	0	0	NA	NA	I-C:I-C:I-C	4,3,3	4	TypeI-U?,TypeI-C,TypeI-U	WYL,csa3,cas3,RT,c2c9_V-U4,DinG,DEDDh,cas7,cas8c,cas5	NA|122aa|up_9|NZ_CP014644.1_32507_32873_+,NA|132aa|up_8|NZ_CP014644.1_32946_33342_+,NA|71aa|up_7|NZ_CP014644.1_33492_33705_+,NA|60aa|up_4|NZ_CP014644.1_35552_35732_-,NA|50aa|up_3|NZ_CP014644.1_35839_35989_-,NA|162aa|up_2|NZ_CP014644.1_36062_36548_-,NA|55aa|up_0|NZ_CP014644.1_39238_39403_-,NA|167aa|down_3|NZ_CP014644.1_44321_44822_-,NA|112aa|down_4|NZ_CP014644.1_44837_45173_-,NA|247aa|down_5|NZ_CP014644.1_45213_45954_-,NA|84aa|down_7|NZ_CP014644.1_47062_47314_-,NA|86aa|down_8|NZ_CP014644.1_47373_47631_-	NA|122aa|up_9|NZ_CP014644.1_32507_32873_+	NA	NA|132aa|up_8|NZ_CP014644.1_32946_33342_+	NA	NA|71aa|up_7|NZ_CP014644.1_33492_33705_+	NA	NA|63aa|up_6|NZ_CP014644.1_33934_34123_-	pfam12677, DUF3797, Domain of unknown function (DUF3797)	NA|139aa|up_5|NZ_CP014644.1_34532_34949_-	pfam12773, DZR, Double zinc ribbon	NA|60aa|up_4|NZ_CP014644.1_35552_35732_-	NA	NA|50aa|up_3|NZ_CP014644.1_35839_35989_-	NA	NA|162aa|up_2|NZ_CP014644.1_36062_36548_-	NA	RT|602aa|up_1|NZ_CP014644.1_36674_38480_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|55aa|up_0|NZ_CP014644.1_39238_39403_-	NA	cas7|286aa|down_0|NZ_CP014644.1_40627_41485_-	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8c|607aa|down_1|NZ_CP014644.1_41477_43298_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|243aa|down_2|NZ_CP014644.1_43313_44042_-	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	NA|167aa|down_3|NZ_CP014644.1_44321_44822_-	NA	NA|112aa|down_4|NZ_CP014644.1_44837_45173_-	NA	NA|247aa|down_5|NZ_CP014644.1_45213_45954_-	NA	NA|286aa|down_6|NZ_CP014644.1_45989_46847_-	cd00315, Cyt_C5_DNA_methylase, Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology	NA|84aa|down_7|NZ_CP014644.1_47062_47314_-	NA	NA|86aa|down_8|NZ_CP014644.1_47373_47631_-	NA	NA|311aa|down_9|NZ_CP014644.1_47799_48732_-	PRK05574, holA, DNA polymerase III subunit delta; Reviewed
GCF_001581875.1_ASM158187v1	NZ_CP014643	Lysinibacillus sphaericus strain OT4b.25 chromosome, complete genome	1	3599434-3599654	1	CRISPRCasFinder	no		WYL,csa3,cas3,RT,c2c9_V-U4,DinG,DEDDh	Orphan	TTTGAAATAAAGTTTAATTAAAA	23	0	0	NA	NA	NA	3	3	Orphan	WYL,csa3,cas3,RT,c2c9_V-U4,DinG,DEDDh,cas7,cas8c,cas5	NA|77aa|up_2|NZ_CP014643.1_3597562_3597793_-,NA|187aa|up_0|NZ_CP014643.1_3598726_3599287_+,NA|130aa|down_0|NZ_CP014643.1_3600402_3600792_-,NA|75aa|down_5|NZ_CP014643.1_3607020_3607245_-	NA|606aa|up_9|NZ_CP014643.1_3589420_3591238_+	cd09609, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF)	NA|328aa|up_8|NZ_CP014643.1_3591465_3592449_+	pfam02810, SEC-C, SEC-C motif	NA|64aa|up_7|NZ_CP014643.1_3592514_3592706_-	pfam10782, zf-C2HCIx2C, Zinc-finger	NA|131aa|up_6|NZ_CP014643.1_3592896_3593289_+	cd09279, RNase_HI_like, RNAse HI family that includes archaeal, some bacterial as well as plant RNase HI	NA|266aa|up_5|NZ_CP014643.1_3593540_3594338_+	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily	NA|219aa|up_4|NZ_CP014643.1_3594403_3595060_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|249aa|up_3|NZ_CP014643.1_3595071_3595818_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|77aa|up_2|NZ_CP014643.1_3597562_3597793_-	NA	NA|283aa|up_1|NZ_CP014643.1_3597864_3598713_+	cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins	NA|187aa|up_0|NZ_CP014643.1_3598726_3599287_+	NA	NA|130aa|down_0|NZ_CP014643.1_3600402_3600792_-	NA	NA|337aa|down_1|NZ_CP014643.1_3602169_3603180_+	PRK07581, PRK07581, hypothetical protein; Validated	NA|399aa|down_2|NZ_CP014643.1_3604111_3605308_-	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|133aa|down_3|NZ_CP014643.1_3605307_3605706_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|107aa|down_4|NZ_CP014643.1_3606458_3606779_-	pfam13028, DUF3889, Protein of unknown function (DUF3889)	NA|75aa|down_5|NZ_CP014643.1_3607020_3607245_-	NA	NA|245aa|down_6|NZ_CP014643.1_3608626_3609361_-	pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase	NA|274aa|down_7|NZ_CP014643.1_3609589_3610411_+	COG1562, ERG9, Phytoene/squalene synthetase [Lipid metabolism]	NA|163aa|down_8|NZ_CP014643.1_3610713_3611202_-	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase	NA|409aa|down_9|NZ_CP014643.1_3611363_3612590_+	COG4097, COG4097, Predicted ferric reductase [Inorganic ion transport and metabolism]
GCF_001581875.1_ASM158187v1	NZ_CP014643	Lysinibacillus sphaericus strain OT4b.25 chromosome, complete genome	2	3701520-3701581	2	CRISPRCasFinder	no	cas3	WYL,csa3,cas3,RT,c2c9_V-U4,DinG,DEDDh	Unclear	AATGGCAACAACGGTGGCAATAA	23	0	0	NA	NA	NA	1	1	Unclear	WYL,csa3,cas3,RT,c2c9_V-U4,DinG,DEDDh,cas7,cas8c,cas5	NA|127aa|up_4|NZ_CP014643.1_3694310_3694691_+,NA|65aa|up_1|NZ_CP014643.1_3697784_3697979_-,NA|105aa|down_0|NZ_CP014643.1_3701757_3702072_-	NA|1550aa|up_9|NZ_CP014643.1_3687006_3691656_-	pfam12733, Cadherin-like, Cadherin-like beta sandwich domain	NA|179aa|up_8|NZ_CP014643.1_3691680_3692217_-	COG4675, MdpB, Microcystin-dependent protein [Function unknown]	NA|165aa|up_7|NZ_CP014643.1_3692236_3692731_-	COG4675, MdpB, Microcystin-dependent protein [Function unknown]	NA|175aa|up_6|NZ_CP014643.1_3692756_3693281_-	COG4675, MdpB, Microcystin-dependent protein [Function unknown]	NA|162aa|up_5|NZ_CP014643.1_3693322_3693808_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|127aa|up_4|NZ_CP014643.1_3694310_3694691_+	NA	cas3|758aa|up_3|NZ_CP014643.1_3694935_3697209_-	COG1205, COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only]	NA|128aa|up_2|NZ_CP014643.1_3697183_3697567_-	pfam08807, DUF1798, Bacterial domain of unknown function (DUF1798)	NA|65aa|up_1|NZ_CP014643.1_3697784_3697979_-	NA	NA|215aa|up_0|NZ_CP014643.1_3698359_3699004_+	PRK02234, recU, Holliday junction-specific endonuclease; Reviewed	NA|105aa|down_0|NZ_CP014643.1_3701757_3702072_-	NA	NA|221aa|down_1|NZ_CP014643.1_3702068_3702731_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|243aa|down_2|NZ_CP014643.1_3702743_3703472_-	COG3935, DnaD, Putative primosome component and related proteins [DNA replication, recombination, and repair]	NA|432aa|down_3|NZ_CP014643.1_3703549_3704845_-	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated	NA|398aa|down_4|NZ_CP014643.1_3704873_3706067_-	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|161aa|down_5|NZ_CP014643.1_3706083_3706566_-	COG5353, COG5353, Uncharacterized protein conserved in bacteria [Function unknown]	NA|478aa|down_6|NZ_CP014643.1_3706898_3708332_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|616aa|down_7|NZ_CP014643.1_3708619_3710467_+	cd13868, CuRO_2_CotA_like, The second Cupredoxin domain of bacterial laccases including CotA, a bacterial endospore coat component	NA|416aa|down_8|NZ_CP014643.1_3710794_3712042_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|71aa|down_9|NZ_CP014643.1_3712543_3712756_-	pfam13127, DUF3955, Protein of unknown function (DUF3955)
GCF_001581875.1_ASM158187v1	NZ_CP014643	Lysinibacillus sphaericus strain OT4b.25 chromosome, complete genome	3	3852017-3852146	3	CRISPRCasFinder	no		WYL,csa3,cas3,RT,c2c9_V-U4,DinG,DEDDh	Orphan	TTGCTTCTTCCGCTTTTTTTGCCTCTTCAGCTTTTTTCGCTGCCTC	46	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,RT,c2c9_V-U4,DinG,DEDDh,cas7,cas8c,cas5	NA,NA|198aa|down_3|NZ_CP014643.1_3855640_3856234_+	NA|225aa|up_9|NZ_CP014643.1_3842218_3842893_-	PRK00023, cmk, (d)CMP kinase	NA|220aa|up_8|NZ_CP014643.1_3842989_3843649_-	COG5581, COG5581, c-di-GMP-binding protein [Signal transduction mechanisms]	NA|428aa|up_7|NZ_CP014643.1_3843735_3845019_-	TIGR02889, Sporulation_protein_YpeB, germination protein YpeB	NA|278aa|up_6|NZ_CP014643.1_3845034_3845868_-	TIGR02869, Spore_cortex-lytic_enzyme, spore cortex-lytic enzyme	NA|225aa|up_5|NZ_CP014643.1_3845964_3846639_-	COG2339, prsW, Membrane proteinase, regulator of anti-sigma factor [Posttranslational modification, protein turnover, chaperones]	NA|323aa|up_4|NZ_CP014643.1_3846723_3847692_+	cd08964, L-asparaginase_II, Type II (periplasmic) bacterial L-asparaginase	NA|514aa|up_3|NZ_CP014643.1_3847720_3849262_-	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]	NA|187aa|up_2|NZ_CP014643.1_3849266_3849827_-	pfam02660, G3P_acyltransf, Glycerol-3-phosphate acyltransferase	NA|322aa|up_1|NZ_CP014643.1_3849883_3850849_-	TIGR04018, thioredoxin_reductase, putative bacillithiol system oxidoreductase, YpdA family	NA|252aa|up_0|NZ_CP014643.1_3850962_3851718_-	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain	NA|481aa|down_0|NZ_CP014643.1_3852679_3854122_-	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|343aa|down_1|NZ_CP014643.1_3854122_3855151_-	COG4955, COG4955, Uncharacterized protein conserved in bacteria [Function unknown]	NA|83aa|down_2|NZ_CP014643.1_3855257_3855506_+	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|198aa|down_3|NZ_CP014643.1_3855640_3856234_+	NA	NA|261aa|down_4|NZ_CP014643.1_3856383_3857166_+	PRK08594, PRK08594, enoyl-[acyl-carrier-protein] reductase FabI	NA|242aa|down_5|NZ_CP014643.1_3857219_3857945_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|402aa|down_6|NZ_CP014643.1_3857969_3859175_-	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|275aa|down_7|NZ_CP014643.1_3859475_3860300_+	cd11386, MCP_signal, Methyl-accepting chemotaxis protein (MCP), signaling domain	NA|182aa|down_8|NZ_CP014643.1_3860315_3860861_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|934aa|down_9|NZ_CP014643.1_3861241_3864043_-	pfam09479, Flg_new, Listeria-Bacteroides repeat domain (List_Bact_rpt)
