assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001593585.2_ASM159358v2	NZ_CP014748	Klebsiella aerogenes strain FDAARGOS_139 chromosome, complete genome	1	1199681-1199795	1	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3,WYL	Orphan	GTTGGGTAGCCCGGATAAGGCGTAACCGC	29	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3,WYL	NA|120aa|up_3|NZ_CP014748.2_1196131_1196491_+,NA	NA|89aa|up_9|NZ_CP014748.2_1190967_1191234_-	PRK10878, PRK10878, FAD assembly factor SdhE	NA|328aa|up_8|NZ_CP014748.2_1191457_1192441_+	PRK09559, PRK09559, putative global regulator; Reviewed	NA|220aa|up_7|NZ_CP014748.2_1192539_1193199_-	PRK15087, PRK15087, hemolysin; Provisional	NA|104aa|up_6|NZ_CP014748.2_1193363_1193675_-	PRK04980, PRK04980, hypothetical protein; Provisional	NA|243aa|up_5|NZ_CP014748.2_1193725_1194454_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|478aa|up_4|NZ_CP014748.2_1194573_1196007_+	PRK15014, PRK15014, 6-phospho-beta-glucosidase BglA; Provisional	NA|120aa|up_3|NZ_CP014748.2_1196131_1196491_+	NA	NA|670aa|up_2|NZ_CP014748.2_1196540_1198550_+	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]	NA|204aa|up_1|NZ_CP014748.2_1198551_1199163_+	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti	NA|168aa|up_0|NZ_CP014748.2_1199152_1199656_+	cd03011, TlpA_like_ScsD_MtbDsbE, TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif	NA|248aa|down_0|NZ_CP014748.2_1199851_1200595_-	PRK09730, PRK09730, SDR family oxidoreductase	NA|958aa|down_1|NZ_CP014748.2_1200655_1203529_-	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|130aa|down_2|NZ_CP014748.2_1203659_1204049_-	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|365aa|down_3|NZ_CP014748.2_1204073_1205168_-	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT	NA|401aa|down_4|NZ_CP014748.2_1205590_1206793_-	PRK08013, PRK08013, oxidoreductase; Provisional	NA|393aa|down_5|NZ_CP014748.2_1206803_1207982_-	PRK05732, PRK05732, 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated	NA|439aa|down_6|NZ_CP014748.2_1207978_1209295_-	PRK10879, PRK10879, proline aminopeptidase P II; Provisional	NA|193aa|down_7|NZ_CP014748.2_1209320_1209899_-	PRK01736, PRK01736, hypothetical protein; Reviewed	NA|110aa|down_8|NZ_CP014748.2_1210065_1210395_+	PRK10972, PRK10972, cell division protein ZapA	NA|199aa|down_9|NZ_CP014748.2_1210719_1211316_+	PRK10333, PRK10333, 5-formyltetrahydrofolate cyclo-ligase family protein; Provisional
GCF_001593585.2_ASM159358v2	NZ_CP014748	Klebsiella aerogenes strain FDAARGOS_139 chromosome, complete genome	2	1401993-1402131	2	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3,WYL	Orphan	TAAGGCGAAGCCGCTACCCGCATCCTGTTACCCGGCGGCGCTGCGC	46	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3,WYL	NA,NA|353aa|down_4|NZ_CP014748.2_1409055_1410114_+	NA|366aa|up_9|NZ_CP014748.2_1390564_1391662_-	PRK09423, gldA, glycerol dehydrogenase; Provisional	NA|357aa|up_8|NZ_CP014748.2_1392218_1393289_+	PRK11468, PRK11468, dihydroxyacetone kinase subunit DhaK; Provisional	NA|211aa|up_7|NZ_CP014748.2_1393299_1393932_+	PRK10005, PRK10005, dihydroxyacetone kinase ADP-binding subunit DhaL	NA|473aa|up_6|NZ_CP014748.2_1393942_1395361_+	PRK11377, PRK11377, dihydroxyacetone kinase subunit M; Provisional	NA|550aa|up_5|NZ_CP014748.2_1395435_1397085_+	TIGR02361, Dihydroxyacetone_kinase_1, dihydroxyacetone kinase, ATP-dependent	NA|258aa|up_4|NZ_CP014748.2_1397188_1397962_-	COG2375, ViuB, Siderophore-interacting protein [Inorganic ion transport and metabolism]	NA|173aa|up_3|NZ_CP014748.2_1398190_1398709_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|460aa|up_2|NZ_CP014748.2_1398972_1400352_+	PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase; Provisional	NA|111aa|up_1|NZ_CP014748.2_1400394_1400727_-	PRK10089, PRK10089, chaperone CsaA	NA|328aa|up_0|NZ_CP014748.2_1400934_1401918_+	PRK10339, PRK10339, DNA-binding transcriptional repressor EbgR; Provisional	NA|1031aa|down_0|NZ_CP014748.2_1402312_1405405_+	PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed	NA|150aa|down_1|NZ_CP014748.2_1405401_1405851_+	PRK10202, ebgC, beta-galactosidase subunit beta	NA|478aa|down_2|NZ_CP014748.2_1405945_1407379_+	PRK15238, PRK15238, inner membrane transporter YjeM; Provisional	NA|478aa|down_3|NZ_CP014748.2_1407608_1409042_+	PRK15238, PRK15238, inner membrane transporter YjeM; Provisional	NA|353aa|down_4|NZ_CP014748.2_1409055_1410114_+	NA	NA|784aa|down_5|NZ_CP014748.2_1410131_1412483_+	PRK10137, PRK10137, alpha-glucosidase; Provisional	NA|99aa|down_6|NZ_CP014748.2_1412523_1412820_-	PRK10486, PRK10486, (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase	NA|296aa|down_7|NZ_CP014748.2_1412816_1413704_-	PRK08227, PRK08227, 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase	NA|334aa|down_8|NZ_CP014748.2_1413715_1414717_-	PRK15408, PRK15408, autoinducer 2 ABC transporter substrate-binding protein LsrB	NA|333aa|down_9|NZ_CP014748.2_1414718_1415717_-	PRK15038, PRK15038, autoinducer 2 ABC transporter permease LsrD
GCF_001593585.2_ASM159358v2	NZ_CP014748	Klebsiella aerogenes strain FDAARGOS_139 chromosome, complete genome	3	3659937-3660051	3	CRISPRCasFinder	no		DinG,DEDDh,csa3,cas3,WYL	Orphan	CTACGCCTGGCAGGGCTACAGGTTTGAGCGGTT	33	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3,WYL	NA,NA	NA|272aa|up_9|NZ_CP014748.2_3646997_3647813_-	TIGR00099, Uncharacterized_protein_MCAP_0867, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily	NA|811aa|up_8|NZ_CP014748.2_3647963_3650396_-	TIGR01774, Putative_formate_acetyltransferase_3, glycyl radical enzyme, PFL2/glycerol dehydratase family	NA|300aa|up_7|NZ_CP014748.2_3650399_3651299_-	TIGR02494, PFLE_PFLC, glycyl-radical enzyme activating protein	NA|252aa|up_6|NZ_CP014748.2_3651454_3652210_-	PRK05690, PRK05690, molybdopterin biosynthesis protein MoeB; Provisional	NA|412aa|up_5|NZ_CP014748.2_3652209_3653445_-	PRK10680, PRK10680, molybdopterin biosynthesis protein MoeA; Provisional	NA|314aa|up_4|NZ_CP014748.2_3653624_3654566_+	PRK10226, PRK10226, isoaspartyl peptidase; Provisional	NA|618aa|up_3|NZ_CP014748.2_3654580_3656434_+	PRK10261, PRK10261, glutathione transporter ATP-binding protein; Provisional	NA|514aa|up_2|NZ_CP014748.2_3656467_3658009_+	PRK15413, PRK15413, glutathione ABC transporter substrate-binding protein GsiB; Provisional	NA|307aa|up_1|NZ_CP014748.2_3658055_3658976_+	PRK15081, PRK15081, glutathione ABC transporter permease GsiC; Provisional	NA|304aa|up_0|NZ_CP014748.2_3658977_3659889_+	PRK15082, PRK15082, glutathione ABC transporter permease GsiD; Provisional	NA|442aa|down_0|NZ_CP014748.2_3660094_3661420_-	PRK14862, rimO, 30S ribosomal protein S12 methylthiotransferase RimO	NA|128aa|down_1|NZ_CP014748.2_3661677_3662061_+	PRK12302, bssR, biofilm formation regulator BssR	NA|368aa|down_2|NZ_CP014748.2_3662165_3663269_+	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase	NA|209aa|down_3|NZ_CP014748.2_3663274_3663901_-	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|401aa|down_4|NZ_CP014748.2_3664157_3665360_+	PRK10001, PRK10001, serine-type D-Ala-D-Ala carboxypeptidase	NA|253aa|down_5|NZ_CP014748.2_3665388_3666147_-	PRK10681, PRK10681, DNA-binding transcriptional repressor DeoR; Provisional	NA|198aa|down_6|NZ_CP014748.2_3666233_3666827_-	PRK11837, PRK11837, undecaprenyl pyrophosphate phosphatase; Provisional	NA|411aa|down_7|NZ_CP014748.2_3667130_3668363_+	PRK15402, PRK15402, MdfA family multidrug efflux MFS transporter	NA|271aa|down_8|NZ_CP014748.2_3668404_3669217_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|401aa|down_9|NZ_CP014748.2_3669216_3670419_-	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters
GCF_001593585.2_ASM159358v2	NZ_CP014747	Klebsiella aerogenes strain FDAARGOS_139 plasmid unnamed	1	22642-22723	1	CRISPRCasFinder	no	DEDDh	DEDDh	Unclear	TGACATTCTCAGATTGTGTTATCAT	25	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,csa3,cas3,WYL	NA|124aa|up_4|NZ_CP014747.1_7171_7543_+,NA|200aa|up_3|NZ_CP014747.1_18083_18683_+,NA|77aa|down_2|NZ_CP014747.1_25505_25736_-,NA|56aa|down_4|NZ_CP014747.1_26293_26461_-,NA|117aa|down_5|NZ_CP014747.1_26503_26854_-,NA|99aa|down_6|NZ_CP014747.1_26850_27147_-	NA|156aa|up_9|NZ_CP014747.1_881_1349_+	pfam16463, Phage_TTP_13, Phage tail tube protein family	NA|123aa|up_8|NZ_CP014747.1_1412_1781_+	pfam16462, Phage_TAC_14, Phage tail assembly chaperone protein, TAC	NA|113aa|up_7|NZ_CP014747.1_5361_5700_+	pfam05939, Phage_min_tail, Phage minor tail protein	NA|252aa|up_6|NZ_CP014747.1_5696_6452_+	pfam05100, Phage_tail_L, Phage minor tail protein L	NA|237aa|up_5|NZ_CP014747.1_6453_7164_+	cd08073, MPN_NLPC_P60, Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains	NA|124aa|up_4|NZ_CP014747.1_7171_7543_+	NA	NA|200aa|up_3|NZ_CP014747.1_18083_18683_+	NA	NA|379aa|up_2|NZ_CP014747.1_18691_19828_+	pfam13884, Peptidase_S74, Chaperone of endosialidase	NA|326aa|up_1|NZ_CP014747.1_19900_20878_-	PRK13698, PRK13698, ParB/RepB/Spo0J family plasmid partition protein	NA|388aa|up_0|NZ_CP014747.1_20880_22044_-	PHA02519, PHA02519, plasmid partition protein SopA; Reviewed	NA|641aa|down_0|NZ_CP014747.1_22752_24675_+	pfam16684, Telomere_res, Telomere resolvase	NA|260aa|down_1|NZ_CP014747.1_24729_25509_-	COG3617, COG3617, Prophage antirepressor [Transcription]	NA|77aa|down_2|NZ_CP014747.1_25505_25736_-	NA	NA|113aa|down_3|NZ_CP014747.1_25732_26071_-	pfam10554, Phage_ASH, Ash protein family	NA|56aa|down_4|NZ_CP014747.1_26293_26461_-	NA	NA|117aa|down_5|NZ_CP014747.1_26503_26854_-	NA	NA|99aa|down_6|NZ_CP014747.1_26850_27147_-	NA	NA|1335aa|down_7|NZ_CP014747.1_27139_31144_-	COG4643, COG4643, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_8|NZ_CP014747.1_31327_31951_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|71aa|down_9|NZ_CP014747.1_32031_32244_+	pfam14549, P22_Cro, DNA-binding transcriptional regulator Cro
