The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP014784	Pseudomonas alcaligenes strain NEB 585 chromosome, complete genome	4406305	2216612	2276224	4406305	head,protease,portal,holin,terminase,integrase,tRNA	Pseudomonas_phage(51.28%)	64	2208341:2208358	2267789:2267806
2208341:2208358	attL	CTTCGCCGGTGGCGGCGC	NA	NA	NA	NA
WP_061904067.1|2216612_2217965_-|protease	membrane protease subunit, stomatin/prohibitin	protease	A0A0F6WCV7	Sinorhizobium_phage	28.4	1.0e-42
WP_061904068.1|2218067_2218790_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_061904069.1|2218937_2219429_-	peptidyl-prolyl cis-trans isomerase	NA	A0A076FI46	Aureococcus_anophage	34.8	1.3e-14
WP_061904070.1|2219602_2221270_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	62.2	2.2e-204
WP_061904071.1|2221270_2222656_+|tRNA	cysteine--tRNA ligase	tRNA	A0A2K9V966	Bandra_megavirus	35.3	1.8e-45
WP_061904072.1|2222715_2224584_-	DEAD/DEAH box helicase	NA	H9C0J4	Bdellovibrio_phage	29.8	2.5e-10
WP_061904073.1|2224649_2225783_-	class C beta-lactamase	NA	NA	NA	NA	NA
WP_061904074.1|2225793_2226231_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_061904075.1|2226365_2227256_+	DMT family transporter	NA	NA	NA	NA	NA
WP_061904076.1|2227259_2227598_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_061904077.1|2227751_2229626_+	EAL domain-containing protein	NA	G3MA91	Bacillus_virus	34.0	4.0e-24
WP_061904078.1|2229629_2230823_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061904079.1|2230980_2232822_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_061904080.1|2233203_2234286_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.2	1.1e-05
WP_061904081.1|2234296_2235394_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	25.1	2.6e-15
WP_061904082.1|2235390_2236257_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_061904083.1|2236267_2237068_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_061904084.1|2237078_2237351_+	DUF2160 domain-containing protein	NA	NA	NA	NA	NA
WP_061904085.1|2237402_2239142_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_021699595.1|2239201_2240056_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	35.6	9.9e-31
WP_061904086.1|2240814_2242041_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	Q5QF66	Pseudomonas_virus	60.1	4.3e-128
WP_061904087.1|2242034_2242256_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_082806431.1|2242272_2242689_-	DUF4406 domain-containing protein	NA	A0A0U4IBL4	Pseudomonas_phage	51.0	2.1e-26
WP_061904089.1|2243125_2243746_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061904090.1|2243742_2243964_-	hypothetical protein	NA	A0A1B0VN94	Pseudomonas_phage	74.5	6.5e-19
WP_156480516.1|2244059_2244704_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156480517.1|2244878_2245538_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061904092.1|2245867_2246089_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061904093.1|2246130_2247960_-	DNA cytosine methyltransferase	NA	A0A1I9KFW0	Aeromonas_phage	36.3	1.3e-88
WP_061904094.1|2247956_2249057_-	site-specific DNA-methyltransferase	NA	A0A1B0VM49	Pseudomonas_phage	61.9	9.2e-122
WP_061904095.1|2249064_2249892_-	SAM-dependent DNA methyltransferase	NA	A0A2K9V411	Faecalibacterium_phage	30.5	2.9e-27
WP_061904096.1|2249938_2250343_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061904097.1|2250339_2250609_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061904098.1|2250979_2251186_-	hypothetical protein	NA	A0A0H5ARH3	Pseudomonas_phage	50.0	2.5e-12
WP_061904099.1|2251666_2251975_+	DUF1654 domain-containing protein	NA	A0A0S2SYC9	Pseudomonas_phage	63.1	8.2e-28
WP_167629401.1|2251986_2252490_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061904100.1|2252446_2252770_-	STAS-like domain-containing protein	NA	A0A2H4J4X6	uncultured_Caudovirales_phage	37.1	2.5e-11
WP_156480519.1|2252741_2253836_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_061904102.1|2253883_2254705_-	LexA family transcriptional regulator	NA	H2BD63	Pseudomonas_phage	53.2	5.1e-69
WP_061904103.1|2254793_2254994_+	helix-turn-helix domain-containing protein	NA	H2BD64	Pseudomonas_phage	81.4	1.0e-18
WP_061904104.1|2255126_2255549_+	Rha family transcriptional regulator	NA	A0A2D1GNM7	Pseudomonas_phage	49.3	1.5e-27
WP_167629403.1|2255550_2256312_+	Pyocin large subunit	NA	Q858D3	Salmonella_phage	50.0	5.1e-47
WP_061904105.1|2256292_2257120_+	ATP-binding protein	NA	A0A059VK34	Pseudomonas_phage	46.0	1.0e-53
WP_061904106.1|2257112_2257478_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061904107.1|2257467_2258463_+|integrase	site-specific integrase	integrase	A0A2D1GND4	Pseudomonas_phage	42.0	1.2e-64
WP_061904108.1|2258544_2259081_+	hypothetical protein	NA	H2BDI9	Pseudomonas_virus	59.9	1.7e-57
WP_061904109.1|2259323_2260070_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061904110.1|2260203_2260527_+|holin	phage holin, lambda family	holin	A0A0U4III7	Pseudomonas_phage	58.8	1.7e-28
WP_156480520.1|2260496_2261315_+	hypothetical protein	NA	A0A1W6JTE1	Pseudomonas_phage	49.4	4.3e-60
WP_061904112.1|2261426_2261972_+|terminase	terminase small subunit	terminase	A0A1B0Z033	Pseudomonas_phage	71.7	3.0e-65
WP_061904113.1|2261943_2263893_+|terminase	phage terminase large subunit family protein	terminase	A0A1B0Z2K0	Pseudomonas_phage	70.1	4.4e-276
WP_061904114.1|2263892_2264099_+	hypothetical protein	NA	B7SYD5	Stenotrophomonas_phage	44.4	5.3e-07
WP_061904115.1|2264100_2265642_+|portal	phage portal protein	portal	Q75QM9	Wolbachia_phage	36.3	3.8e-73
WP_061904116.1|2265649_2267605_+|head	Mu-like prophage major head subunit gpT family protein	head	A0A2I7QRU0	Vibrio_phage	32.9	3.0e-83
WP_061904117.1|2267679_2268030_+	DUF2190 family protein	NA	NA	NA	NA	NA
2267789:2267806	attR	GCGCCGCCACCGGCGAAG	NA	NA	NA	NA
WP_156480521.1|2268033_2268351_+	hypothetical protein	NA	A0A1W6JT71	Pseudomonas_phage	41.3	1.2e-13
WP_061904118.1|2268347_2268818_+	hypothetical protein	NA	A0A1W6JT75	Pseudomonas_phage	46.4	9.6e-28
WP_061904119.1|2268828_2269866_+	hypothetical protein	NA	A0A1W6JT83	Pseudomonas_phage	42.5	2.2e-24
WP_082806432.1|2269982_2270489_+	DUF4124 domain-containing protein	NA	NA	NA	NA	NA
WP_061904120.1|2270544_2270850_+	hypothetical protein	NA	A0A0M3VI87	Ralstonia_phage	34.5	7.4e-05
WP_061904121.1|2270960_2273534_+	tape measure protein	NA	A0A1B0YZV6	Pseudomonas_phage	38.4	1.5e-135
WP_061904122.1|2273576_2274095_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082806433.1|2274094_2275834_+	hypothetical protein	NA	A0A1W6JTA3	Pseudomonas_phage	49.0	2.0e-139
WP_061904123.1|2275837_2276224_+	hypothetical protein	NA	A0A1B0YZV1	Pseudomonas_phage	35.7	2.7e-12
>prophage 2
NZ_CP014784	Pseudomonas alcaligenes strain NEB 585 chromosome, complete genome	4406305	2279310	2285932	4406305		Pseudomonas_phage(42.86%)	11	NA	NA
WP_061904128.1|2279310_2279877_+	hypothetical protein	NA	A0A1W6JT84	Pseudomonas_phage	68.1	3.7e-66
WP_061904129.1|2279880_2280156_+	hypothetical protein	NA	A0A1W6JTD4	Pseudomonas_phage	63.9	7.8e-14
WP_156480522.1|2280148_2280733_+	hypothetical protein	NA	Q8HA60	Vibrio_phage	34.1	5.9e-11
WP_061904131.1|2280732_2281245_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061904132.1|2281235_2281439_-	carbon storage regulator	NA	NA	NA	NA	NA
WP_061904133.1|2281512_2281716_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061904134.1|2281810_2282326_+	hypothetical protein	NA	C8ZKR3	Pseudomonas_phage	46.4	4.4e-34
WP_061904135.1|2282325_2282835_+	DUF2514 family protein	NA	NA	NA	NA	NA
WP_061904136.1|2283453_2284140_-	SOS response-associated peptidase family protein	NA	A0A2H4J991	uncultured_Caudovirales_phage	60.4	2.9e-73
WP_061904137.1|2284224_2284662_+	peptidase S24	NA	A0A1W6JNS2	Morganella_phage	42.9	1.3e-18
WP_061904138.1|2284654_2285932_+	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	52.0	1.6e-117
>prophage 3
NZ_CP014784	Pseudomonas alcaligenes strain NEB 585 chromosome, complete genome	4406305	2851417	2862152	4406305	tRNA	uncultured_Caudovirales_phage(60.0%)	12	NA	NA
WP_061904530.1|2851417_2852086_+	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	85.2	8.4e-94
WP_061904531.1|2852176_2852569_+	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	77.5	2.3e-51
WP_061904532.1|2852568_2852928_+	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	58.3	9.8e-33
WP_061904533.1|2852927_2853227_+	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	67.7	7.9e-28
WP_061904534.1|2853223_2853559_+	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	76.6	1.7e-42
WP_061904535.1|2853555_2854530_+	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	78.6	1.4e-145
WP_061904536.1|2854533_2855910_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_061904537.1|2855981_2857262_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	55.6	2.6e-99
WP_061904538.1|2857404_2857776_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	37.8	3.5e-09
WP_061904539.1|2857772_2859095_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	39.1	1.8e-79
WP_061904540.1|2859104_2859731_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_167629418.1|2859746_2862152_-	DNA translocase FtsK 4TM domain-containing protein	NA	A0A218M9A2	Mycobacterium_phage	52.2	1.5e-87
>prophage 4
NZ_CP014784	Pseudomonas alcaligenes strain NEB 585 chromosome, complete genome	4406305	2921184	2931575	4406305	integrase	Liberibacter_phage(66.67%)	6	2927625:2927640	2945966:2945981
WP_061904574.1|2921184_2924235_-	HsdR family type I site-specific deoxyribonuclease	NA	A0A220A398	Liberibacter_phage	67.6	0.0e+00
WP_082806453.1|2924250_2925402_-	restriction endonuclease subunit S	NA	A0A240FAT6	Liberibacter_phage	62.0	7.2e-61
WP_061904575.1|2925398_2926913_-	SAM-dependent DNA methyltransferase	NA	A0A220A2U5	Liberibacter_phage	77.8	8.5e-203
WP_061904576.1|2926905_2927946_-	virulence RhuM family protein	NA	Q9JMN3	Wolbachia_phage	47.5	5.7e-73
2927625:2927640	attL	TGTGGCTCTGCACCCG	NA	NA	NA	NA
WP_061904577.1|2927942_2929442_-	SAM-dependent DNA methyltransferase	NA	A0A220A2U4	Liberibacter_phage	74.3	4.5e-220
WP_061904578.1|2930165_2931575_+|integrase	site-specific integrase	integrase	A0A2H4IYX8	uncultured_Caudovirales_phage	34.9	1.4e-53
2945966:2945981	attR	CGGGTGCAGAGCCACA	NA	NA	NA	NA
